DCAR_013799 | CarrotOmics Tripal4

Name

DCAR_013799

Organism

Daucus carota subsp. sativus

Product

9-cis-epoxycarotenoid dioxygenase

Protein_id

gnl|USDA|DCAR_013799

Transcript_id

gnl|USDA|mrna.DCAR_013799

Type

mRNA

Unique Name

DCAR_013799.mRNA

Sequence Residues

ATGGCTGCTTCTGCCACTTCTGCAAGTACATGGGCTAAACCCAAAATCTA
TTCTTCACAGAGAGATTCACCTAGAAAAACCAATGTAAATTGTGCTATAC
AATCATCGCCTTCTATTCTTCATTTCCCGAAACAATCCAAGCAAAAATAT
CAAACGCCTTCGATTCCCACTACCATTGTACAACCAAAACATCAAGATTC
TTCATCTTCTGCGACCCCAAAATGGAATTTTCTGCAAAAAGCAGCTTCGA
TGGCCTTAGATGCTGTCGAAAACATAATCATTTCACAAGAACAAAGCCAC
CCTTTACCAAAAACAGCTGACCCACAAGTACAAATCTCCGGGAATTTTGC
TCCTGTACAAGAACAACCAGTCCAGCACCACCTCCCTGTCACCGGGAAAA
TACCCGAATGCATTTCCGGTGTCTACGTTCGAAACGGGGCTAATCCTCAT
TTTGAACCAACCGGAGGGCACCATTTTTTTGACGGGGATGGCATGGTCCA
TGCCGTCAAATTTAAAGACGGGGAAGCTAGCTATGCTTGCAGGTACACTG
AAACAGAGAGACTCATCCAGGAGCGTAATTTGGGTCGAACTGTTTTTCCC
AAAGCCATTGGTGAGCTCCATGGCCATTCAGGGATAGCTCGACTTGCTCT
GTTTTATGCTCGTGGCCTTTTCGGACTTGTTGATCATTCTCAGGGCACCG
GAGTGGCTAATGCTGGCCTGGTTTATTTTAACAACAGGCTGTTAGCTATG
TCGGAAGATGACTTGCCTTATCATGTTCAAATCACTCCTAAGGGTGATCT
TAGGACTGTCGAGAGATATAGTTTTGATGGTCAGTTGGATTCTACTATGA
TTGCTCACCCGAAAATTGATCCTGAGACCAATGAGCTTATTGCATTAACA
TATAATGTTATTCAAAAGCCTTATCTCAAGTATTTTCGGGTTTCGCCTGA
TGGTGTGAAGTCCTCGGATGTGGATATTGAATTGGCTGATCCAACTATGA
TGCATGATTTTGCAATTACGGAGAATTTTGTGGTAATTCCTGATCAGCAA
GTTGTTTTCAAGATTTCAGAAATGATACAAGGTGGATCGCCTGTTGTGTA
TGATAAGGAGAAAGTTTCGCGTTTCGGTGTGTTGGACAAGTATGCGAAAG
ATGGGTCGGGGATCAAGTGGGTTGAGGTTCCAGACTGTTTTTGCTTTCAC
TTGTGGAATGCTTGGGAGGATAAAGAGAGTGATGAAATTGTGGTGATTGG
GTCTTGTATGACTCCAGCTGATTCGATTTTTAATGAATGTGATGAAGGGT
TAGAAAGTGTTCTTTCTGAAATCAGGCTGAATTTGAAGACCGGAAAATCG
ACCCGTAGGGCAATCATTTCGCCTGAAGATCAAGTTAATTTAGAGGCAGG
GATGGTGAATAGAAACAAGTTGGGAAGAAAGACACAATTTGCGTACTTGG
CTATTGCCGAGCCGTGGCCTAAAGTGTCTGGTTTTGCAAAAGTAGACCTT
TTTAATGGCGAAATCAAGAAGTTCTTCTATGGGGACAACAAATATGGAGG
CGAGCCTCTTTTCCTTCCAAGAAACCCCAATTCGGAGAATGAAGATGATG
GGTACATATTAGCTTTTGTTCATGACGAAAAGGCATGGAAATCAGAGCTT
CAAATAGTTAATGCCATGACTCTAGAGTTGGAGGCCACAGTGAAGCTTCC
ATCAAGGGTGCCATATGGTTTCCATGGCACTTTCCCGAGATTTACCAGAG
GGATTGATCACATATTTGTCCCCGGAAATCTCCGAGCTGTTATAAATACG
AACCTTCTTTGTCACAGAAGCGTTCTGATAGTATTAGTGTTTATTTGTAA
TGATTTCATGGGAAGTTTTGAAGCGGCAGCTTGTAGCTTGGGGTGTAGGT
AG

Sequence Length

1902

Sequence MD5 Checksum

e354cda6bfbb7cb43cd2386b2ac40667

Relationship

The DCAR_013799 derives from mRNA DCAR_013799
The mRNA DCAR_013799 is a part of Gene DCAR_013799
The DCAR_013799 is a part of mRNA DCAR_013799
The DCAR_013799 is a part of mRNA DCAR_013799

Database Reference Annotations

GFF_source:.

Publication

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Analysis

Is Analysis

False

Is Obsolete

False