CarrotOmics Marker Types

Search for markers using the Genetic Marker Search Page

Marker TypeMarker AbbreviationFull Marker Name or TargetTechnology Reference
FingerprintingISSRInter-simple sequence repeatZietkiewicz et al., 1994
RAPDRandom amplified polymorphic DNAWilliams et al., 1990
AFLPAmplified Fragment Length PolymorphismVos et al., 1995
SRAPSequence-Related Amplified PolymorphismLi and Quiros, 2001
DArTDiversity Arrays TechnologyJaccoud et al., 2001, Wenzl et al., 2004
Feature-specific PCR with cleavageCAPSCleaved amplified polymorphic sequencesKonieczny and Ausubel, 1993
Feature-specific PCREST markerExpressed Sequence TagParkinson and Blaxter, 2009
EST-SSRSSR sequence from an ESTEllis and Burke, 2007
GeneGene sequence 
SCARSequence Characterized Amplified RegionsParan and Michelmore, 1993
SSRMicrosatellites, Simple Sequence RepeatsTautz, 1989
SAMPLSelective Amplification of Microsatellite Polymorphic LociVivek, 1999
STSSequence-Tagged Siteinfo at NCBI
TDTransposon DisplayVan den Broeck et al. 1998, Vandenbussche et al. 2013
Feature-specific OtherIsozymeIsozymeSchulz et al., 1993
SNP-specificSNPSingle nucleotide polymorphismAhmadian et al., 2000
HybridizationRFLPRestriction Fragment Length PolymorphismBonierbale et al., 1988
FISHFluorescent In-Situ HybridizationIovene et al., 2008
Misc. markersHRMHigh resolution melting markerLiew et al., 2004
N/AChromosome end placeholder markers for FISH maps