DCAR_013799 | CarrotOmics Tripal4

Cds

>DCAR_013799cds ATGGCTGCTTCTGCCACTTCTGCAAGTACATGGGCTAAACCCAAAATCTA TTCTTCACAGAGAGATTCACCTAGAAAAACCAATGTAAATTGTGCTATAC AATCATCGCCTTCTATTCTTCATTTCCCGAAACAATCCAAGCAAAAATAT CAAACGCCTTCGATTCCCACTACCATTGTACAACCAAAACATCAAGATTC TTCATCTTCTGCGACCCCAAAATGGAATTTTCTGCAAAAAGCAGCTTCGA TGGCCTTAGATGCTGTCGAAAACATAATCATTTCACAAGAACAAAGCCAC CCTTTACCAAAAACAGCTGACCCACAAGTACAAATCTCCGGGAATTTTGC TCCTGTACAAGAACAACCAGTCCAGCACCACCTCCCTGTCACCGGGAAAA TACCCGAATGCATTTCCGGTGTCTACGTTCGAAACGGGGCTAATCCTCAT TTTGAACCAACCGGAGGGCACCATTTTTTTGACGGGGATGGCATGGTCCA TGCCGTCAAATTTAAAGACGGGGAAGCTAGCTATGCTTGCAGGTACACTG AAACAGAGAGACTCATCCAGGAGCGTAATTTGGGTCGAACTGTTTTTCCC AAAGCCATTGGTGAGCTCCATGGCCATTCAGGGATAGCTCGACTTGCTCT GTTTTATGCTCGTGGCCTTTTCGGACTTGTTGATCATTCTCAGGGCACCG GAGTGGCTAATGCTGGCCTGGTTTATTTTAACAACAGGCTGTTAGCTATG TCGGAAGATGACTTGCCTTATCATGTTCAAATCACTCCTAAGGGTGATCT TAGGACTGTCGAGAGATATAGTTTTGATGGTCAGTTGGATTCTACTATGA TTGCTCACCCGAAAATTGATCCTGAGACCAATGAGCTTATTGCATTAACA TATAATGTTATTCAAAAGCCTTATCTCAAGTATTTTCGGGTTTCGCCTGA TGGTGTGAAGTCCTCGGATGTGGATATTGAATTGGCTGATCCAACTATGA TGCATGATTTTGCAATTACGGAGAATTTTGTGGTAATTCCTGATCAGCAA GTTGTTTTCAAGATTTCAGAAATGATACAAGGTGGATCGCCTGTTGTGTA TGATAAGGAGAAAGTTTCGCGTTTCGGTGTGTTGGACAAGTATGCGAAAG ATGGGTCGGGGATCAAGTGGGTTGAGGTTCCAGACTGTTTTTGCTTTCAC TTGTGGAATGCTTGGGAGGATAAAGAGAGTGATGAAATTGTGGTGATTGG GTCTTGTATGACTCCAGCTGATTCGATTTTTAATGAATGTGATGAAGGGT TAGAAAGTGTTCTTTCTGAAATCAGGCTGAATTTGAAGACCGGAAAATCG ACCCGTAGGGCAATCATTTCGCCTGAAGATCAAGTTAATTTAGAGGCAGG GATGGTGAATAGAAACAAGTTGGGAAGAAAGACACAATTTGCGTACTTGG CTATTGCCGAGCCGTGGCCTAAAGTGTCTGGTTTTGCAAAAGTAGACCTT TTTAATGGCGAAATCAAGAAGTTCTTCTATGGGGACAACAAATATGGAGG CGAGCCTCTTTTCCTTCCAAGAAACCCCAATTCGGAGAATGAAGATGATG GGTACATATTAGCTTTTGTTCATGACGAAAAGGCATGGAAATCAGAGCTT CAAATAGTTAATGCCATGACTCTAGAGTTGGAGGCCACAGTGAAGCTTCC ATCAAGGGTGCCATATGGTTTCCATGGCACTTTCCCGAGATTTACCAGAG GGATTGATCACATATTTGTCCCCGGAAATCTCCGAGCTGTTATAAATACG AACCTTCTTTGTCACAGAAGCGTTCTGATAGTATTAGTGTTTATTTGTAA TGATTTCATGGGAAGTTTTGAAGCGGCAGCTTGTAGCTTGGGGTGTAGGT AG

Gene

NCED-3

Locus_tag

DCAR_013799

Name

DCAR_013799

Organism

Daucus carota subsp. sativus

Pep

>DCAR_013799pep MAASATSASTWAKPKIYSSQRDSPRKTNVNCAIQSSPSILHFPKQSKQKY QTPSIPTTIVQPKHQDSSSSATPKWNFLQKAASMALDAVENIIISQEQSH PLPKTADPQVQISGNFAPVQEQPVQHHLPVTGKIPECISGVYVRNGANPH FEPTGGHHFFDGDGMVHAVKFKDGEASYACRYTETERLIQERNLGRTVFP KAIGELHGHSGIARLALFYARGLFGLVDHSQGTGVANAGLVYFNNRLLAM SEDDLPYHVQITPKGDLRTVERYSFDGQLDSTMIAHPKIDPETNELIALT YNVIQKPYLKYFRVSPDGVKSSDVDIELADPTMMHDFAITENFVVIPDQQ VVFKISEMIQGGSPVVYDKEKVSRFGVLDKYAKDGSGIKWVEVPDCFCFH LWNAWEDKESDEIVVIGSCMTPADSIFNECDEGLESVLSEIRLNLKTGKS TRRAIISPEDQVNLEAGMVNRNKLGRKTQFAYLAIAEPWPKVSGFAKVDL FNGEIKKFFYGDNKYGGEPLFLPRNPNSENEDDGYILAFVHDEKAWKSEL QIVNAMTLELEATVKLPSRVPYGFHGTFPRFTRGIDHIFVPGNLRAVINT NLLCHRSVLIVLVFICNDFMGSFEAAACSLGCR*

Sequence Coordinates

DCARv2_Chr4:27276559..27278549-

Type

gene

Unique Name

DCAR_013799.gene

Sequence Residues

ATGGCTGCTTCTGCCACTTCTGCAAGTACATGGGCTAAACCCAAAATCTA
TTCTTCACAGAGAGATTCACCTAGAAAAACCAATGTAAATTGTGCTATAC
AATCATCGCCTTCTATTCTTCATTTCCCGAAACAATCCAAGCAAAAATAT
CAAACGCCTTCGATTCCCACTACCATTGTACAACCAAAACATCAAGATTC
TTCATCTTCTGCGACCCCAAAATGGAATTTTCTGCAAAAAGCAGCTTCGA
TGGCCTTAGATGCTGTCGAAAACATAATCATTTCACAAGAACAAAGCCAC
CCTTTACCAAAAACAGCTGACCCACAAGTACAAATCTCCGGGAATTTTGC
TCCTGTACAAGAACAACCAGTCCAGCACCACCTCCCTGTCACCGGGAAAA
TACCCGAATGCATTTCCGGTGTCTACGTTCGAAACGGGGCTAATCCTCAT
TTTGAACCAACCGGAGGGCACCATTTTTTTGACGGGGATGGCATGGTCCA
TGCCGTCAAATTTAAAGACGGGGAAGCTAGCTATGCTTGCAGGTACACTG
AAACAGAGAGACTCATCCAGGAGCGTAATTTGGGTCGAACTGTTTTTCCC
AAAGCCATTGGTGAGCTCCATGGCCATTCAGGGATAGCTCGACTTGCTCT
GTTTTATGCTCGTGGCCTTTTCGGACTTGTTGATCATTCTCAGGGCACCG
GAGTGGCTAATGCTGGCCTGGTTTATTTTAACAACAGGCTGTTAGCTATG
TCGGAAGATGACTTGCCTTATCATGTTCAAATCACTCCTAAGGGTGATCT
TAGGACTGTCGAGAGATATAGTTTTGATGGTCAGTTGGATTCTACTATGA
TTGCTCACCCGAAAATTGATCCTGAGACCAATGAGCTTATTGCATTAACA
TATAATGTTATTCAAAAGCCTTATCTCAAGTATTTTCGGGTTTCGCCTGA
TGGTGTGAAGTCCTCGGATGTGGATATTGAATTGGCTGATCCAACTATGA
TGCATGATTTTGCAATTACGGAGAATTTTGTGGTAATTCCTGATCAGCAA
GTTGTTTTCAAGATTTCAGAAATGATACAAGGTGGATCGCCTGTTGTGTA
TGATAAGGAGAAAGTTTCGCGTTTCGGTGTGTTGGACAAGTATGCGAAAG
ATGGGTCGGGGATCAAGTGGGTTGAGGTTCCAGACTGTTTTTGCTTTCAC
TTGTGGAATGCTTGGGAGGATAAAGAGAGTGATGAAATTGTGGTGATTGG
GTCTTGTATGACTCCAGCTGATTCGATTTTTAATGAATGTGATGAAGGGT
TAGAAAGTGTTCTTTCTGAAATCAGGCTGAATTTGAAGACCGGAAAATCG
ACCCGTAGGGCAATCATTTCGCCTGAAGATCAAGTTAATTTAGAGGCAGG
GATGGTGAATAGAAACAAGTTGGGAAGAAAGACACAATTTGCGTACTTGG
CTATTGCCGAGCCGTGGCCTAAAGTGTCTGGTTTTGCAAAAGTAGACCTT
TTTAATGGCGAAATCAAGAAGTTCTTCTATGGGGACAACAAATATGGAGG
CGAGCCTCTTTTCCTTCCAAGAAACCCCAATTCGGAGAATGAAGATGATG
GGTACATATTAGCTTTTGTTCATGACGAAAAGGCATGGAAATCAGAGCTT
CAAATAGTTAATGCCATGACTCTAGAGTTGGAGGCCACAGTGAAGCTTCC
ATCAAGGGTGCCATATGGTTTCCATGGCACTTTCGTAAGTGAAAAAGATC
TAGAAAAACAAGCCTAATCCCCAGATTGGCTTGTTACAGTTAGTTTATTA
GTTTGATTGTGATTGCTTGCAGCCGAGATTTACCAGAGGGATTGATCACA
TATTTGTCCCCGGAAATCTCCGAGCTGTTATAAATACGAACCTTCTTTGT
CACAGAAGCGTTCTGATAGTATTAGTGTTTATTTGTAATGATTTCATGGG
AAGTTTTGAAGCGGCAGCTTGTAGCTTGGGGTGTAGGTAG

Sequence Length

1990

Sequence MD5 Checksum

2fe7bc0fdbe4bc65f2019c124bfd7e62

Relationship

The mRNA DCAR_013799 is a part of Gene DCAR_013799
The Genetic Marker MK000050 NCED3 is located in Gene DCAR_013799

Database Reference Annotations

GFF_source:.

Publication

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Analysis

Is Analysis

False

Is Obsolete

False