XM_017398753.1 | CarrotOmics Tripal4

Gbkey

mRNA

Gene

LOC108224237

Model_evidence

Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns

Name

XM_017398753.1

Organism

Daucus carota subsp. sativus

Product

protein TPX2, transcript variant X3

Transcript_id

XM_017398753.1

Type

mRNA

Unique Name

XM_017398753.1

Sequence Residues

CTCCTCTCAGACATATATCCCCTCTTATTCTCAGTTGCCATATTGCATCT
CCCCTTTTCTCAACTCCACAACACACACACACACACACACACAATGGCGA
CGCTTAGTGAATCTTACAATAACTTGGTGATCGATGAGGTTTACGAGTTT
TCGGCGCCTCGGTTTTTCGATTTTATCCAAGGAGAGACCAAAGAAGAGAT
GCATCGAGCGGAGATCTGGTTCGAAACTTCTCTTAGTCACGCTCCATCTC
CTTTTATGCCAAAAATTAAGACCAGCAGAACTGCTGTTCTGCTTGAAAGC
CTTTGTGACTTCAGTGAGGCTGACCAACCGCACAAGGTACCAGAATCATT
AAAACCCCCACCCATTTCTGGATCAGAGACTGTGGCAGTTCCTACTTTGG
ATGTAGAGCAAACAATACCCCAACCTGATGGCAACCCCGTGCAAGTCATA
GAGGAAGTTGATTCAAATGGAAGTAAAGAAACACAAACTGGATCTCTTCT
TAAGCCGGCTAGTAGTGCCATAGAGATCACTTCTAAAGATAAGGAAACTC
TATGCACGCAAGGAAATGAAAGTGCTATAGCAAAAGCCCCTTCTCCATCT
GTGAAAGTTGCAGAAGAAGCTCATACATTAAGTTCCAAAGTAGGACCTGA
AGCTTGTACGCCTAAACCACAAATTTCTCAAAAGTGTAAGCAACCACAGA
CTGATTCCAAGAAACAAATGACAGCAAGAAAGATTGCCAGTATGGTGAGG
AATCCATCGTTACTGAAGGCAAAAACTCAACCCAAGATATCATCACAAGC
TAAAAGCAACAAACCTGAAAGTGCGAGAAGGAACAACAATTTTATGAACA
AACTTTGCACTCCAAATTTTGCTCAAGAAAACCAACCCATAAAGAGGCAA
AAACTGGATGCAGAAAGATCTAGACAGATTCTTAATATCAAACCTCAAAC
CTTAATGCACAAGACAAGATCTGGTCTAGTCAGCAGCAGTTCCAGCTTAT
GCACATCAACTAATAAAACTCGTAAAGAGGACAGAAAGATTTATGCGCGG
GAGCCAGCAGCCCCTTTTGTTTCAATGGCAGAAATGATGAACAAGTTCCA
GTCGAACACCAGGGATATGTCACTATCTCGTCCCAGCAGTTCCCTTGCCT
GCGATGCTGCTGGTCCTAGGAAGCCTAAACTCACATTGACAAGGCCAAAG
GAACCTGAATTTGAGACATCTCAGAGAGTTCGCTCAGTTAAGATTAAGAG
TTCTGCCGAACTTGAGGAAGAATTGATGGCAAAAATACCAAAATTCAAGG
CTCGTCCAATCAATAAAAAGATTCTTGAAACTCCTACCTTGCCAGCGCTG
CCCAGAAGTAATCCACAGCTTCCAAAGTTTCAAGAGTTTCACCTGGAAAC
GATGACCAGGGCTAATAATAAGGCTGAAACCTCAACTGTAGCTTCAACAG
AATCTGCACCTCAGAATGCACAATCGAAACCTCATCATCTGACAGAGCCC
AAACCACCCACTCTTCAAACATCATTGAGAGCACGTCCACCCAGAATTAA
AAGTTCAGAAGAACTAGAGAAAGAAGAGCTTGAGAAAATTCCAAGGTTTA
AAGCCAGACCTCTGAATAAGAAGATTTTTGAAAGTAAAGGGGAACTGGGG
GTGTTCTGCAACACCAAAAGACAAGTCACCATTCCTCAAGAATTTCACTT
TGCAATAGATGAAAGGATTCCGCCACCAACAGCTGTTGCTGATTTGTTTG
ACAAGCTTTCACTAAATACAGAAACTCGCCATGACAAACAACTTCCAAGA
AACACTGCACCAAACCCGTTCCATCTGCACACAGAGGAAAGAGGAGCCAA
GAAAGAAAATAAACTTGTGATGGAGCTACTGCAGAAGCAGTTGGAAGAGG
AGAAGTCTAGAGTTCCGAAGGCTAATCCATATCCTTATACTACTGACTAT
CCTCTTCCACCAAAACCAGAGCCAAAACCGTGCACAAAACCAGAACCTTT
CCAGCTGGAGAGTTTGGTGAGGCATGAAGAGGAATTACAGCGTGAAATGG
AAGAAAGGCAGAGGATGGAGAGGGAAGAAGCAAGAATGAGACTGTTTAAA
GCACAGCCAGTCATGAAAGAGGACCCTATTCCAGTTCCTGAGAAAGTGCG
TAAGCCACTCACTGAAGTTCAGGAATTTGATCTACATGTAGAACACCGAG
CTGTTGAAAGAGCGGAATTCGATAAAAAGGTCAAGGAGAAAGAAGTAATA
TATAAGAGATACAGAGAAGAAGCTGAATCTGAAAAGCTGATGGAAGAAGA
GAAAGCATTGAAACAGCTGAGGAGAACACTGGTACCCCATGCAAGACCAG
TCCCGAATTTCGCCAATCCATTCTTACCACAAAAGTCATGTAAAGTGACA
AAGGCAAAGTCACCAAAACTGAAAATTCGGGAGAGGAAGGAAAGGCAGCA
TAACAAGATGCTAGCTACTGCAACTTCTAGTGCAGCGTCCAATATGAGGT
GATTGGGCAGAACCCTGAGGAGCTGATGATCTTTAGGGCCAAGTTTCTTA
GAACATGTACAGTCTCTGTACTATCTTTGCACACAAACTATATATGCTAG
TTATAGCTCCTTGTTGACAGAAGTCTAAAGGTCAATTTATTTGTTTGTAG
AACATCAAACTGTATGTCAGTAACAATTGATTAATTATTTTTGTGTTAAC
AAAATCAAGTGGGGAAATGTACCAATTA

Sequence Length

2728

Sequence MD5 Checksum

7bbb93215fe6dcfde2a14ee50fc73900

Relationship

The XM_017398753.1 derives from mRNA XM_017398753.1
The mRNA XM_017398753.1 is a part of Gene LOC108224237
The XM_017398753.1.exon1 is a part of mRNA XM_017398753.1
The XM_017398753.1.exon2 is a part of mRNA XM_017398753.1
The XM_017398753.1.exon3 is a part of mRNA XM_017398753.1
The XM_017398753.1.exon4 is a part of mRNA XM_017398753.1
The XM_017398753.1.exon5 is a part of mRNA XM_017398753.1
The XM_017398753.1.exon6 is a part of mRNA XM_017398753.1
The XM_017398753.1.exon7 is a part of mRNA XM_017398753.1
The XM_017398753.1.exon8 is a part of mRNA XM_017398753.1
The XM_017398753.1.exon9 is a part of mRNA XM_017398753.1
The XM_017398753.1.exon10 is a part of mRNA XM_017398753.1
The XM_017398753.1.exon11 is a part of mRNA XM_017398753.1
The XM_017398753.1.exon12 is a part of mRNA XM_017398753.1
The XM_017398753.1.exon13 is a part of mRNA XM_017398753.1
The XM_017398753.1.exon14 is a part of mRNA XM_017398753.1
The XM_017398753.1.exon15 is a part of mRNA XM_017398753.1
The XM_017398753.1.exon16 is a part of mRNA XM_017398753.1
The XM_017398753.1.exon17 is a part of mRNA XM_017398753.1
The XM_017398753.1.exon18 is a part of mRNA XM_017398753.1
The XM_017398753.1.exon19 is a part of mRNA XM_017398753.1
The XM_017398753.1.exon20 is a part of mRNA XM_017398753.1
The XM_017398753.1.exon21 is a part of mRNA XM_017398753.1
The XP_017254242.1 is a part of mRNA XM_017398753.1

Database Reference Annotations

Analysis

Is Analysis

False

Is Obsolete

False