NCBI Daucus carota subsp. sativus Annotation Release 100

Name
NCBI Daucus carota subsp. sativus Annotation Release 100
Type
Genome annotation
Description

The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results.

View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/

Data from this analysis can be viewed in JBrowse here.

Program, Pipeline, Workflow or Method Name
NCBI Eukaryotic Genome Annotation Pipeline
Program Version
7.1
Name
GCF_001625215.1
Data Source URI

https://www.ncbi.nlm.nih.gov/assembly/GCF_001625215.1/

Relationship
The NCBI Daucus carota subsp. sativus Annotation Release 100 is a part of Genome Assembly Carrot Genome Assembly DCARv2
Publication
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Sequence Feature
Notice: Only the first 100 items are displayed here
  • LOC108227532
  • XM_017402844.1
  • XM_017402844.1.exon1
  • XM_017402844.1.exon2
  • XM_017402844.1.exon3
  • XM_017402844.1.exon4
  • XM_017402844.1.exon5
  • XM_017402844.1.exon6
  • XM_017402844.1.exon7
  • XM_017402844.1.exon8
  • XM_017402844.1.exon9
  • XM_017402768.1
  • XM_017402768.1.exon1
  • XM_017402768.1.exon2
  • XM_017402768.1.exon3
  • XM_017402768.1.exon4
  • XM_017402768.1.exon5
  • XM_017402768.1.exon6
  • XM_017402768.1.exon7
  • XM_017402768.1.exon8
  • XP_017258257.1
  • XP_017258333.1
  • LOC108204757
  • XM_017374356.1
  • XM_017374356.1.exon1
  • XM_017374356.1.exon2
  • XM_017374356.1.exon3
  • XM_017374356.1.exon4
  • XM_017374356.1.exon5
  • XM_017374356.1.exon6
  • XM_017374356.1.exon7
  • XM_017374356.1.exon8
  • XM_017374356.1.exon9
  • XM_017374356.1.exon10
  • XP_017229845.1
  • LOC108204427
  • XM_017373852.1
  • XM_017373852.1.exon1
  • XM_017373852.1.exon2
  • XM_017373852.1.exon3
  • XM_017373852.1.exon4
  • XM_017373852.1.exon5
  • XM_017373853.1
  • XM_017373853.1.exon1
  • XM_017373853.1.exon2
  • XM_017373853.1.exon3
  • XM_017373853.1.exon4
  • XM_017373853.1.exon5
  • XM_017373850.1
  • XM_017373850.1.exon1
  • XM_017373850.1.exon2
  • XM_017373850.1.exon3
  • XM_017373850.1.exon4
  • XM_017373850.1.exon5
  • XM_017373851.1
  • XM_017373851.1.exon1
  • XM_017373851.1.exon2
  • XM_017373851.1.exon3
  • XM_017373851.1.exon4
  • XM_017373851.1.exon5
  • XP_017229339.1
  • XP_017229340.1
  • XP_017229341.1
  • XP_017229342.1
  • LOC108204032
  • XM_017373301.1
  • XM_017373301.1.exon1
  • XM_017373301.1.exon2
  • XM_017373301.1.exon3
  • XM_017373301.1.exon4
  • XM_017373301.1.exon5
  • XM_017373301.1.exon6
  • XM_017373301.1.exon7
  • XM_017373301.1.exon8
  • XP_017228790.1
  • LOC108204039
  • XM_017373316.1
  • XM_017373316.1.exon1
  • XM_017373316.1.exon2
  • XM_017373316.1.exon3
  • XM_017373316.1.exon4
  • XM_017373307.1
  • XM_017373307.1.exon1
  • XM_017373307.1.exon2
  • XM_017373307.1.exon3
  • XM_017373307.1.exon4
  • XM_017373307.1.exon5
  • XM_017373327.1
  • XM_017373327.1.exon1
  • XM_017373327.1.exon2
  • XM_017373327.1.exon3
  • XM_017373327.1.exon4
  • XM_017373327.1.exon5
  • XM_017373321.1
  • XM_017373321.1.exon1
  • XM_017373321.1.exon2
  • XM_017373321.1.exon3
  • XM_017373321.1.exon4
  • XM_017373321.1.exon5
  • XR_001803614.1
Organism
Daucus carota subsp. sativus
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