XM_017392873.1 | CarrotOmics Tripal4

Gbkey

mRNA

Gene

LOC108219423

Model_evidence

Supporting evidence includes similarity to: 1 EST, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns

Name

XM_017392873.1

Organism

Daucus carota subsp. sativus

Product

violaxanthin de-epoxidase, chloroplastic, transcript variant X2

Transcript_id

XM_017392873.1

Type

mRNA

Unique Name

XM_017392873.1

Sequence Residues

TTCATTACATATGTGGCGGGGTTTGACACCTAACAGTATCTTGTAATCAC
ACAATGTCTTATCTCATTTCTCTCCCTTTCCCCATCACACCCTCCATATT
TTGATGACATGCTTCTCTCCCTCCTCATCCTCAAGGTTTGCATTTTTCCT
CAACTACCCACCTTTTCTTTTAGCCATCGATGATACTCACTCTTTTGCTT
CTTCAGAATTCACACTGAAGTATGGCCTTTTGTCTACACTCAACTTTTAT
ATCCAGTGAATGCAACAGCTTGTATTCCACAACCCAATTCACCACCAATG
GAAGGTTTGCAGGTCGAAGGACGGATTTTAATAATGGTGGTTTAGTTATG
GTGAAATTGTGGTCGAATTGCAAAAGATCCACACCTACGCAGGTTATAAG
GAATCTTAGGGTATATTGCGGGTTGGACTCTAGGTTCCCTGATATTTTGT
CGAATGGAAGGGCAAAGATTTTTTCCTTGTGTAATATCGAAGCAGTTATG
AAGAGTAAGGACCCATTCAACCTGGAAACAACGGTCAAATTGATTGCTCA
GAAGCAGTGGAGCCAGTTTGCAGCAGTAGCTCTTGTATTGGCTTGTACAT
TCGTGATAATACCAAATGCAGATGCTGTTGACGCTCTCAAAACTTGTACT
TGCTTACTTAAGGAGTGCAGGGTGGAGCTTGCCAAATGCATTGCAAACCC
ATCATGTGCAGCCAATGTTGCTTGTCTCCAAACATGCAACAATAGACCTG
ATGAGACCGAATGCCAGATAAAGTGTGGGGATCTGTTTGAAAACAGTGTC
GTAGATCAGTTCAATGAGTGTGCTGTATCGAGAAAGAAATGTGTGCCACG
TAAATCTGACGTGGGTGAATTTCCTGTCCCGGCAGCTGATGTGCTTGTAA
AAAGCTTCAACATCAATGATTTCACTGGGAAGTGGTTTATTACTAGTGGT
CTAAATCCAACATTTGATGCTTTTGATTGCCAATTGCACGAGTTCTACAC
AGAAGGCAACAAACTTGTAGGAAATTTGTCATGGCGCATAGGAACTCCAG
ATGGTGGTTTTTTTAATCGATCAGCTGTACAGAAATTTGTACAAGATCCA
TCCCAGCCGGGAATCCTCTACAATCATGACAATGAGTATCTCCATTACGA
AGATGACTGGTATATTTTGTCTTCAAAGCTAGAGGGTACACCAGAAGACT
ATCTATTTGTATATTACAGAGGAAAGAATGATGCATGGGATGGATATGGT
GGCGCATTTGTGTACACAAGAAGTGCAGTTTTGCCCGAAAGTATTGTACC
TGAACTAGAAAGGGCTGCTAAAAGCGTGGGTAGGGACTTCAACACCTTTA
TCAGAACTGACAATACATGCGGGCCTGAACCTCCCCTTATTGATAGACTG
GAGAAGACAGCAGAAGCAGGGGAAAGGACGATTATAAAAGAGGTTGAGGA
GATAGAACAGGAGGTGGAGAAAGTGAAGGACACAGAAGTGAGTCTGTTCC
GTAGGTTGGCCGAAGGGTTCAAAGTGTTCCTAGAAGATGAACAAAACGCA
CTCAATGGGCTGACTAAAGAAGAGGAGGAGATTTTGAGTGGCCTACAAAT
GGAAGCAGCTGAGGTAGAAAAACTCTTCGAAAATGCACTACCTATCAGGA
AGTTGAGATAAGTAATATTTACGCTATATGAGAGGCTCTCTCAACCGATC
AAAGACAGATTTGTATTAGCTTAAATGTATAGATTCGAAGTTATCATATA
GTACACACAATATATTGAAAATCATTTTTGAATCAACTCCTATCGTTTTT
TAAGGTCACACACAAAGGAAAGAGGTCATTTGAACATATATTCCTATATT
TTTCTCTCGATA

Sequence Length

1862

Sequence MD5 Checksum

02dc036aad24b6fef73169855d303f30

Relationship

The XM_017392873.1 derives from mRNA XM_017392873.1
The mRNA XM_017392873.1 is a part of Gene LOC108219423
The XM_017392873.1.exon1 is a part of mRNA XM_017392873.1
The XM_017392873.1.exon2 is a part of mRNA XM_017392873.1
The XM_017392873.1.exon3 is a part of mRNA XM_017392873.1
The XM_017392873.1.exon4 is a part of mRNA XM_017392873.1
The XM_017392873.1.exon5 is a part of mRNA XM_017392873.1
The XM_017392873.1.exon6 is a part of mRNA XM_017392873.1
The XP_017248362.1 is a part of mRNA XM_017392873.1

Database Reference Annotations

Analysis

Is Analysis

False

Is Obsolete

False