XM_017379330.1 | CarrotOmics Tripal4

Gbkey

mRNA

Gene

LOC108208799

Model_evidence

Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns

Name

XM_017379330.1

Organism

Daucus carota subsp. sativus

Product

protein SAND, transcript variant X1

Transcript_id

XM_017379330.1

Type

mRNA

Unique Name

XM_017379330.1

Sequence Residues

ATCGGCTACGATCATACTGAACTTCGCTACAAACATCATTATTCCGTCCA
GGTCCAGCGAAGTCATCAAATATTATAGAATTTTTCCCAGTTTAACAAAA
ACAGTTGGACCCGGACCCATCAAATATAGCTGAACAATTACGATGAGACC
GACCCGGTCATTTATTTGACCCGAATATATTAATTCCACACACTCCAATT
CTTGTTCCCTTCTCTCAACTACCCTTCTTCTCTGCTTCCACTTCTTCGAT
TTCTCCCCATACACACAACTCTCTTCACTCCAATGTCATCCGACGATGCT
CACTCCTCCTCATCAGAGCACGACTCCACCGATCAAAACCCTAACCCTAG
CACCTCAATCGACCAATCTCTCGACGCAATTGAAGGTCAATTAACCTCAA
TCTCACTCAACCACCGCAATTCCCCTCTCCCGGAGCCCCCGATTCCACCT
CCTCATCACGGAATCGGTGATACATTGCCTTCCGATGCGCATTCGCAAGT
GGAAGAAGTAGGAGCAGTTGAGAAGTCTGGTTCCGATGTGGAAGTCGAGA
ATTCGGTGTCGCGAGGGGAAGGAGTGTTGTGGAGGAATAGCTCGGATGTG
GAAGGGGAAGTGGAAGGGCAGGGGAGTCCGAGTAGTAGTGGATATGCGGG
CGGGAAAGGGACGAGTAGTAGTAGTGGTGTGAGTGGTTCCGGTATCGAGG
AGATTAGTGGTGATGAGGTTGATCAAGGTGAGGGAGGTATAAGGAGTGGC
TCTTTTGGGGGTAGTGTGGATTCGGAGTGGGTTCCAGGGAAACGACATGT
TAATGAAGATGATGCTTCTGTATCATGGAGGAAAAGGAAAAAGCATTTCT
TTGTATTAAGCCATTCTGGAAAACCAATATACTCGAGATATGGAGATGAA
CACAGACTAGCAGGATTTTCAGCAACTTTGCAAGCCATCATTTCCTTTGT
GGAGAATGGGGGTGATCGTGTGAAGTTGGTTAGGGCAGGAAAACACCAGG
TGGTTTTTCTTGTTAAAGGACCAATATATCTAGTTTGCATAAGCTGTACA
GAAGAACCTCATGAATCTCTCAATGAACAACTGGAACTTCTTTATGGCCA
GATGATACTTATTCTGACAAAGTCTATAAATAGATGCTTCGAGAAGAATC
CTAAATTTGATATGACGCCTTTGCTTGGGGGAACAGATGCTGTATTCTCT
TCTCTCATCCACTCATATAGTTGGAACCCCGCCACTTTCCTCCATGCCTA
CTCTTGTCTTCCCCTTGCTTATCCAACAAGGCAAGCTGCTGGTGCCATAT
TGCAGGATGTTGCTGAGTCAGGCGTCCTCTTCGCAATATTAATGTGTAAA
CACAAGGTCATCAGTCTGGTTGGGGCACAAAAAGCATCTCTTCATCCTGA
TGATATGCTCTTGCTTGCCAACTTTGTGATGTCATCTGAATCATTTAGGA
CATCAGAATCTTTCTCCCCAATCTGTCTTCCGAGATACAATCCAATGGCA
TTTTTATATGCATATGTATATTATCTTGATGCTGATACATATTTAATGCT
GCTCACTGCTAATCCAGATGCATTTTATCGTCTAAAAGATTGGAGGATCC
GAATCGAGATGGTCCTTCTGAAGTCAAATGTTCTTAATGAAGCTCAGAGG
TCGATGTTGGATGGTGGCATGCATGTTGAGGATTTGCCTGTTGATCCATC
CCCTCGTTCTGGATCTTTGTCATCTCATTTAGGTCAGCCTAGACCTCCAC
CAGACTCTGCAGACAGGTGTAAGGCACTGTTAGGTGGTCCTTGCGGACTC
TGGCACTTCATTTACCGCAGTATATATTTGGATCAATATGTATCTTCTGA
GTTCTCATCACCAATTAATACTCCTAAACAACAGAAAAGATTATATAGAG
CATATCAGAAGCTGTATACGTCAATGCATGATAGAGAACTTGGTCCGCAC
AAAACCCAGTTTAGAAGGGACAATAACTATGTTTTACTCTGTTGGGTTAC
TCAGGATTTTGAACTTTATGCAGCATTTGATCCTCTAGCAGACAAGGCAC
TAGCTATAAAGACATGCAACCGGGTCTGCCAGTGGGTCAAAGATGTGGAG
AATGAAGTTTTTTTGTTGGGAGCAAGCCCCTTTTCATGGTGACGTTCCCA
GAAAAGTATGTGTTTTTGTATTCTAGTTTTGATTTTTGAATAAGATTTTA
ACACGGCAATTTTATGCCAATCGTAGTATATCAATCTTTTAGTTCATTAA
ATGTTTGTACCATCAGATGTATTTCACATTTACTTGTATTTAGGTCTGTA
ATCCATCTCTAGGTATATTTATGAGTCCTCATTGAGGCCAACCTACAATT
TTGCAATAGAAGACCTGAATTGTTTATGTACAATCAGGATTAGCTTGCAT
AATATCCTGTGATGATTCGTACTAAATAATCTGTCCTAGGATAGTCTCAA
TTATAACAAGGAATGTAATAGCAGTAGCAGCGTGGCTACTTGATTTCGAA
CTGGCCAATTTGTGAATTGTGCTTCTTTCAATTTTAAGATATATGACGTT
CCA

Sequence Length

2553

Sequence MD5 Checksum

7f72f184ec3cf630a6faab0a68621dfb

Relationship

The XM_017379330.1 derives from mRNA XM_017379330.1
The mRNA XM_017379330.1 is a part of Gene LOC108208799
The XM_017379330.1.exon1 is a part of mRNA XM_017379330.1
The XM_017379330.1.exon2 is a part of mRNA XM_017379330.1
The XM_017379330.1.exon3 is a part of mRNA XM_017379330.1
The XM_017379330.1.exon4 is a part of mRNA XM_017379330.1
The XM_017379330.1.exon5 is a part of mRNA XM_017379330.1
The XM_017379330.1.exon6 is a part of mRNA XM_017379330.1
The XM_017379330.1.exon7 is a part of mRNA XM_017379330.1
The XM_017379330.1.exon8 is a part of mRNA XM_017379330.1
The XM_017379330.1.exon9 is a part of mRNA XM_017379330.1
The XM_017379330.1.exon10 is a part of mRNA XM_017379330.1
The XM_017379330.1.exon11 is a part of mRNA XM_017379330.1
The XM_017379330.1.exon12 is a part of mRNA XM_017379330.1
The XM_017379330.1.exon13 is a part of mRNA XM_017379330.1
The XM_017379330.1.exon14 is a part of mRNA XM_017379330.1
The XP_017234819.1 is a part of mRNA XM_017379330.1

Database Reference Annotations

Analysis

Is Analysis

False

Is Obsolete

False