XM_017385220.1 | CarrotOmics Tripal4

Gbkey

mRNA

Gene

LOC108213415

Model_evidence

Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns

Name

XM_017385220.1

Organism

Daucus carota subsp. sativus

Product

carotenoid 9,10(9',10')-cleavage dioxygenase 1-like, transcript variant X3

Transcript_id

XM_017385220.1

Type

mRNA

Unique Name

XM_017385220.1

Sequence Residues

TCATATCATAAATGAATTTGTAAAAGAAAGAGAGAAAAAAACAGCATAAT
TCAATACAATGCTGCAATCAAATTTACAGTCAATGAAGTGGAGCAACTTT
TATTTGGACTCCAGATTATCAGCAAGAATGGTGTCTTCTTCAACTAATCA
GAAGATGAATATCGTTACTAATGAGTTGGTTGAGCAGCATGAGGAAACTA
CTAATGATCTTATGCTTAGTAACCGGAAAAATACAGGCTTTCTATACACG
AGACGAAAGACGGTGATGGGAAAGCAAAATGTGAAGGAAGTGAAGAGAAA
TGAAGCGGAAGTAGTGGTGGTAAATCCAAAAGTGAGGAAAGGGTTAACAT
CAATGGCTATTGACTGGATTGAAAGTTTGATCGTTAGGTACATGTATGAC
TCCTCTGTAGATCATCATTGGCTTTCTGGTAACTTTGCTCCGGTGCTTGA
CGAGGCTCCTCCTTGTACTAATCTCCCTGTCATTGGACATCTTCCGGATT
GTCTGAATGGTGCGTTTCTTCGGGTTGGTCCAAATCCTAAATACCCCCCT
GTGGCTGGTTATCACTGGTTTGACGGAGATGGCATGATTCATGGATTACG
CATTAAAGATGGAAATGCTACTTATGTTTCTCGTTATGTGAAAACATCTC
GTCTGAAACAAGAAGAGACTTATGGAGGAGCCAAATTTATAAAGGTCGGA
GATCTTAAGGGACTATTTGGGCTACTTATGCTTAACATGCAAATTCTCAG
AGAAAAATTGGAAGTATTGGATATGTCATATGGATATGGAACAGCTAATA
CGGCTATGATTTATCATCATGGTAAACTTATGGCTCTTTCTGAGGGTGAT
AAACCGTATGTCATTGGAGTGAAGGAAGATGGAGATTTGCAAACCCTGGG
TTTGCTGGATTTTGACAAGCGGCTAACACATTCATTCACTGCCCATCCAA
AGGTCGACCCATGTACCGGTAAATGTGAAATGTTTACCTTCGGCTATTCA
CAAACACATCCATACTTAACATACAGGGTGATCTCGAAAGATGGTTTTAT
AAATGATCCAGTGACAATAACATTACCACGCCCTGTATTGATGCATGACT
TTGCCATTACTGAAAATTACGTGATTATTATGGACCTACCGCTGTACATA
AAACCCAAGGAAATGGTGAAGGAAAAGAAGCTGATATTCACATTTGATGC
AACTAAAAAGGCCCGGTTTGGTGTCCTTCCACGATATGCTAAGAATGACT
CGCTGATTAAATGGTTTGAGCTCCCAAATTGCTTTATATTCCATAACGCC
AATGCGTGGGAGGAAGGAGATGATGTTGTTTTAATCACTTGCCGTGTAGA
GAATCCAGACTTTACCATGAATAATGAGAGTATGAATGGGAAGCTCGAGG
ATTCTAATAATGAATTGTTTGAGATGAGATTTAACATGAAGAGCGGTCGA
GCTTCCCAGAAGAAACTCTCTGCATCTGCTGTTGAATTTCCTCGGATAAA
TGAGAGCTATACTGGACGGAAACAACGGTATGTATATGGAACTGTATCGA
ATCACTTTGCAAAGGTCAGTGGGATCGTCAAATTTGATTTGCACATGAAC
CCCGAAATGGGAAAAAGAAAGATTAAAGTTGGAGGAAACATTCAGGGAAT
TTTTGACCTGGGACCTGGTATATTTGGTTCAGAGGCCATCTTCATTCCTC
TACCGCATAAAACTTTGGATCTGAAAATTTGCAAAAATGACTTGGGGCTC
CCCCAAGAATTTTTCCAGGAAGTGAGATCCGAAATATCAGATTAAATTTT
GTGCAAAAAAAGGGTTTGGTGGCCTTGGAAAATATTAGCCCGATCCAGTT
ATAATTTTGGGGTTTGAAAAATTTGCAAGAATGAATTGGTGCACCTCAGA
TGCATCATTACTGAAGAATTGGGAGCCATATGTACCAATACTTACTTCCG
GAGTTTTACAAGCTAAACAACAAATTTAAGCTACTTTTCAAAAATAAATA
TTTAAGATTCTGTAATGGCACCTATAATAACAGTGAGAAGGTTTAAATGA
ATTTCTTGTTAGCTCTTGCCTAATTCACTAGTTTGCTGTGCAGAAAATCA
GCCATAAATGTGATTGATGCAAGAACAATGTCACCTGATCCCGTTGCAGT
TGTTGAATTACCA

Sequence Length

2163

Sequence MD5 Checksum

8dbcb19d269e1ac5e35e9825bb7f04d2

Relationship

The XM_017385220.1 derives from mRNA XM_017385220.1
The mRNA XM_017385220.1 is a part of Gene LOC108213415
The XP_017240709.1 is a part of mRNA XM_017385220.1
The XM_017385220.1.exon14 is a part of mRNA XM_017385220.1
The XM_017385220.1.exon13 is a part of mRNA XM_017385220.1
The XM_017385220.1.exon12 is a part of mRNA XM_017385220.1
The XM_017385220.1.exon11 is a part of mRNA XM_017385220.1
The XM_017385220.1.exon10 is a part of mRNA XM_017385220.1
The XM_017385220.1.exon9 is a part of mRNA XM_017385220.1
The XM_017385220.1.exon8 is a part of mRNA XM_017385220.1
The XM_017385220.1.exon7 is a part of mRNA XM_017385220.1
The XM_017385220.1.exon6 is a part of mRNA XM_017385220.1
The XM_017385220.1.exon5 is a part of mRNA XM_017385220.1
The XM_017385220.1.exon4 is a part of mRNA XM_017385220.1
The XM_017385220.1.exon3 is a part of mRNA XM_017385220.1
The XM_017385220.1.exon2 is a part of mRNA XM_017385220.1
The XM_017385220.1.exon1 is a part of mRNA XM_017385220.1

Database Reference Annotations

Analysis

Is Analysis

False

Is Obsolete

False