XM_017385214.1 | CarrotOmics Tripal4

Gbkey

mRNA

Gene

LOC108213415

Model_evidence

Supporting evidence includes similarity to: 50 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns

Name

XM_017385214.1

Organism

Daucus carota subsp. sativus

Product

carotenoid 9,10(9',10')-cleavage dioxygenase 1-like, transcript variant X2

Transcript_id

XM_017385214.1

Type

mRNA

Unique Name

XM_017385214.1

Sequence Residues

TCATATCATAAATGAATTTGTAAAAGAAAGAGAGAAAAAAACAGCATAAT
TCAATACAATGCTGCAATCAAATTTACAGTCAATGAAGTGGAGCAACTTT
TATTTGGACTCCAGATTATCAGCAAGAATGGTGTCTTCTTCAACTAATCA
GAAGATGAATATCGTTACTAATGAGTTGGTTGAGCAGCATGAGGAAACTA
CTAATGATCTTATGCTTAGTAACCGGAAAAATACAGGCTTTCTATACACG
AGACGAAAGACGGTGATGGGAAAGCAAAATGTGAAGGAAGTGAAGAGAAA
TGAAGCGGAAGTAGTGGTGGTAAATCCAAAAGTGAGGAAAGGGTTAACAT
CAATGGCTATTGACTGGATTGAAAGTTTGATCGTTAGGTACATGTATGAC
TCCTCTGTAGATCATCATTGGCTTTCTGGTAACTTTGCTCCGGTGCTTGA
CGAGGCTCCTCCTTGTACTAATCTCCCTGTCATTGGACATCTTCCGGATT
GTCTGAATGGTGCGTTTCTTCGGGTTGGTCCAAATCCTAAATACCCCCCT
GTGGCTGGTTATCACTGGTTTGACGGAGATGGCATGATTCATGGATTACG
CATTAAAGATGGAAATGCTACTTATGTTTCTCGTTATGTGAAAACATCTC
GTCTGAAACAAGAAGAGACTTATGGAGGAGCCAAATTTATAAAGGTCGGA
GATCTTAAGGGACTATTTGGGCTACTTATGCTTAACATGCAAATTCTCAG
AGAAAAATTGGAAGTATTGGATATGTCATATGGATATGGAACAGCTAATA
CGGCTATGATTTATCATCATGGTAAACTTATGGCTCTTTCTGAGGGTGAT
AAACCGTATGTCATTGGAGTGAAGGAAGATGGAGATTTGCAAACCCTGGG
TTTGCTGGATTTTGACAAGCGGCTAACACATTCATTCACTGCCCATCCAA
AGGTCGACCCATGTACCGGTGAAATGTTTACCTTCGGCTATTCACAAACA
CATCCATACTTAACATACAGGGTGATCTCGAAAGATGGTTTTATAAATGA
TCCAGTGACAATAACATTACCACGCCCTGTATTGATGCATGACTTTGCCA
TTACTGAAAATTACGTGATTATTATGGACCTACCGCTGTACATAAAACCC
AAGGAAATGGTGAAGGAAAAGAAGCTGATATTCACATTTGATGCAACTAA
AAAGGCCCGGTTTGGTGTCCTTCCACGATATGCTAAGAATGACTCGCTGA
TTAAATGGTTTGAGCTCCCAAATTGCTTTATATTCCATAACGCCAATGCG
TGGGAGGAAGGAGATGATGTTGTTTTAATCACTTGCCGTGTAGAGAATCC
AGACTTTACCATGAATAATGAGAGTATGAATGGGAAGCTCGAGGATTCTA
ATAATGAATTGTTTGAGATGAGATTTAACATGAAGAGCGGTCGAGCTTCC
CAGAAGAAACTCTCTGCATCTGCTGTTGAATTTCCTCGGATAAATGAGAG
CTATACTGGACGGAAACAACGGTATGTATATGGAACTGTATCGAATCACT
TTGCAAAGGTCAGTGGGATCGTCAAATTTGATTTGCACATGAACCCCGAA
ATGGGAAAAAGAAAGATTAAAGTTGGAGGAAACATTCAGGGAATTTTTGA
CCTGGGACCTGGTATATTTGGTTCAGAGGCCATCTTCATTCCTCGTAAGC
CCAACATTACTTCTGAAGAAGATGATGGCTACTTGATTCATTTTCTACAT
AATGAGAACACTGGAAAATCAGCCATAAATGTGATTGATGCAAGAACAAT
GTCACCTGATCCCGTTGCAGTTGTTGAATTACCATACAGAGTTCCTTACG
GATTTCATGCCTTATTTATGAGCGAGGAACAACTTCAAGAACAAGCTGAA
CTGTAAAATGGTGAAAGCTTGAGAGTTCCGGACAACTTGTGTGACAAGAC
CTCCATAAATATCTTACATTTTAAATATTTTATATAATGACAGTTTCTAA
GAAGGGAGGTTTATAGCAATGCATAATGCATTCTTAAGTTTGTGTTGTAC

Sequence Length

2050

Sequence MD5 Checksum

73bd659358f9449ab9fb87773b03b905

Relationship

The XM_017385214.1 derives from mRNA XM_017385214.1
The mRNA XM_017385214.1 is a part of Gene LOC108213415
The XP_017240703.1 is a part of mRNA XM_017385214.1
The XM_017385214.1.exon15 is a part of mRNA XM_017385214.1
The XM_017385214.1.exon14 is a part of mRNA XM_017385214.1
The XM_017385214.1.exon13 is a part of mRNA XM_017385214.1
The XM_017385214.1.exon12 is a part of mRNA XM_017385214.1
The XM_017385214.1.exon11 is a part of mRNA XM_017385214.1
The XM_017385214.1.exon10 is a part of mRNA XM_017385214.1
The XM_017385214.1.exon9 is a part of mRNA XM_017385214.1
The XM_017385214.1.exon8 is a part of mRNA XM_017385214.1
The XM_017385214.1.exon7 is a part of mRNA XM_017385214.1
The XM_017385214.1.exon6 is a part of mRNA XM_017385214.1
The XM_017385214.1.exon5 is a part of mRNA XM_017385214.1
The XM_017385214.1.exon4 is a part of mRNA XM_017385214.1
The XM_017385214.1.exon3 is a part of mRNA XM_017385214.1
The XM_017385214.1.exon2 is a part of mRNA XM_017385214.1
The XM_017385214.1.exon1 is a part of mRNA XM_017385214.1

Database Reference Annotations

Analysis

Is Analysis

False

Is Obsolete

False