MK000041 LCYE
Marker_type
STS
Name
MK000041 LCYE
Organism
Type
genetic_marker
Unique Name
MK000041_LCYE
Sequence Residues
GACTTCACATTTTCCCAGAAACTTCTACACAATCTCCACCGTAATGCCAC
CGTAACTAAAACACACATTTAAATTCTCGCCGGAAACAATGGAGTCGTAC
TGCATAGGTGGCCGGAACTTCACAACAATGGCGGTGTTCTCGACGTGTCC
GACGTGGAGGCGACCGAGGAGGAAGAGGCTGAGAAGGAGTAATGTGAAGG
TGAGTTGTGGGAGGAAGAGTGAGATGAGGTGTGTGAAGGAGGTTATTAGT
TGTGTTGCTGTTGTTGAAGATGAGGAGTTCGCTGATGAGGAGGATTTTGT
TAAAGCCGGTGGCTCGGAGCTTTTGTTTGTTCAAATGCAGCGGAATAAGG
CTATGGATACTCAGTCTAAACTTGCTCATAAATTGCCGCGAATACCTATT
AGAGATAGTGTATTGGATTTGGTGGTTATTGGTTGTGGTCCTGCTGGTCT
TGCTCTTGCTGCAGAATCAGCTAAGCTTGGTCTGAGAGTTGGGCTTATTG
GGCCTGATCTTCCCTTTACTAATAATTATGGTGTATGGGAGGATGAATTT
ATAGATCTTGGACTTGAAGGGTGTATTGAGCATGTTTGGCGGGATACTAT
TGTATATCTTGATGATGGTGATCCTATTATGATTGGCCGTGCTTACGGAA
GAGTTAGTCGCCATTTGCTTCATGAAGAATTGCTTAAAAGGTGTGTCGAG
TCAGGTGTTTCGTATCTTAGCTCAAAAGTTGAAAAGATTATTGAAGCTGG
AGATGGCCACAGCCTGGTTGAGTGTGAAAATAATATTGTCATTCCATGCA
GGCTTGCTACTGTTGCATCTGGAGCAGCTTCTGGGAAACTTTTGCAGTAT
GAGGTTGGGGGTCCCAGAGTTTCTGTCCAAACAGCTTATGGTGTCGAGGT
TGAGGTGGAAAACAATCCATATGATCCCAGTCTAATGGTTTTCATGGATT
ACAGAGATTATACCAAACAAAAAGTTCCAGGCATGGAGGCAGAATATCCA
ACATTTCTTTATGTGATGCCCATGTCCCCAACAAGGATTTTCTTTGAGGA
GACATGTTTGGCTTCAAAAGATGCGATGCCATTCGATCTACTGAAGAAAA
AACTCATGTCAAGATTACAGACGATGGGAATTCGAGTTGCCAAGACATAT
GAAGAGGAATGGTCTTATATACCTGTTGGGGGATCTTTACCTAATACTGA
GCAAAAAAACCTTGCATTTGGTGCAGCTGCAAGCATGGTGCATCCAGCCA
CTGGCTATTCAGTTGTCAGATCATTGTCAGAGGCCCCAAATTACGCTGCT
GTTATTGCAAACATCTTGAAAAGTAGTCAAATGAACGGGATGATTAATTA
TGGAAGATATACAGAGAACATCTCAATGCAAGCTTGGAAGACCCTGTGGC
CTCAAGAAAGGAAACGCCAGAGAGCATTCTTTCTATTTGGACTAGCACTC
ATTTTACAGCTGGATATCGACGGCATAAGAACATTCTTCCAAACTTTTTT
CCGCTTACCCACCTGGATGTGGCAGGGATTTCTTGGTTCTTCTCTATCCT
CAGTCGACCTTGTACTATTTGCCTTTTATATGTTTATCATAGCCCCACAC
CACTTGAGAATGTCCCTTGTAAGACATCTCCTTTCTGATCCAACAGGAGC
TACAATGGTAAAAACATATTTAACGGCCTAGGAACCCTAATTTGTATATC
TTAGCCCAAATGCTCGGTTCAGAAAGTTATGTAAATAACTCTTTTCATAA
TATATATAATTATCATTTTTGATCTATCC
Sequence Length
1779
Sequence MD5 Checksum
b4b286d9f63252a2ccf8e0eb96e717dd
Relationship
- The LCYE is an instance of Genetic Marker MK000041 LCYE
- The Genetic Marker MK000041 LCYE is adjacent to Primer LCY-Ins-F
- The Genetic Marker MK000041 LCYE is adjacent to Primer LCY-Ins-R
- The Genetic Marker MK000041 LCYE is located in Gene DCAR_028276
- The Genetic Marker MK000041 LCYE is located in Gene LOC108197060
Synonyms
- MK000041
- C009K15
Database Reference Annotations
Publication
- Just BJ, Santos CA, Fonseca ME, Boiteux LS, Oloizia BB, Simon PW. Carotenoid biosynthesis structural genes in carrot (Daucus carota): isolation, sequence-characterization, single nucleotide polymorphism (SNP) markers and genome mapping.. TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik. 2007 Feb; 114(4):693-704.
- Grzebelus D, Jagosz B, Simon PW. The DcMaster Transposon Display maps polymorphic insertion sites in the carrot (Daucus carota L.) genome.. Gene. 2007 Apr 01; 390(1-2):67-74.
- Cavagnaro PF, Chung SM, Manin S, Yildiz M, Ali A, Alessandro MS, Iorizzo M, Senalik DA, Simon PW. Microsatellite isolation and marker development in carrot - genomic distribution, linkage mapping, genetic diversity analysis and marker transferability across Apiaceae.. BMC genomics. 2011 Aug 01; 12:386.
- Salgon Sylvia. Phenotyping and pigment analysis in carrot (Daucus carota L.) and genetic mapping with SSR markers and candidate genes. M.S. Thesis. 2011. Ministère de l'Agriculture Montpellier
Is Analysis
False
Is Obsolete
False