MK000039 LCYB
Marker_type
STS-Sanger
Name
MK000039 LCYB
Organism
Type
genetic_marker
Unique Name
MK000039_LCYB
Sequence Residues
GGTTTGGATGATTTGATTTTGGATATCTTCACCCACAAATTATTTTTTAT
TTTTAGAAAGAAAATAAAAGAATTTGTTTCAAGTGAGTGCAGCTTACACC
TACTTGATTATATGAAAAATGAGATATGCTTGTATGTATCTCGTCTGTAT
CTACCTCCAATCCCTCTTGCTGCTAGATGGGTAAGTCTTTAATTCTTTAA
CCGTAGCTTTATTTACTTGTAATTCTCCAATATCTTCTGCAGTTATATGT
TTAGTACATGTTTTTATTTTGAACAATTTTTTATTAAGTCACTCTGAAAT
TTCCATTAATTATTGGTGAAAGTTAGCATAAAGGTTGAGAATTTGGGATA
TCTTGGAACCCAGATTTTGTTTTTGGAGATATATTTGGTAAATTAATAGA
ACCATACATGAAAGTGATGGATACTCTACTAAAGACTCATAACAAGCTTG
AGTTTTTCAATCCAATTCATGGGTTTCCTGATAAAGTTGGAACCCTGAGT
TGTTTGAAGTTTCGAAACCAGGAGCTGAGGTTTGGCTCTAGAAGATCGAA
TGTAAATTGGGGGAAGAACGGTTCTGTAAAGGCTAGTAGTAGTGCCCTTT
TGGAGCTTGTTCAAGAAACCAAGAAAGAAAATCTTGAATTTGACCTTCCT
TTGTATGACCCGTCGAATGGCCTTGTAGTGGACTTGGCTGTAGTTGGTGG
AGGTCCTGCAGGGTTAGCGGTAGCACAACAAGTTTCTGAGGCAGGACTTG
CGGTTGTGTCTATAGACCCTTCTCCAAAATTGATATGGCCAAACAATTAT
GGTGTTTGGGTGGATGAGTTTGAGGCTATGGATTTGCTAGATTGCCTTGA
CACTACCTGGTCAAGTGCAATTGTTTACATTGATGACCAGACAACCAAAG
AGCTCGGAAGACCGTATGGAAGGGTTAACAGGAAGCAGCTTAAATCTAAA
ATGATGCAGAAGTGCATATCAAATGGAGTTAAATTTCATCAGGCTAAGGT
TGTAAAAGTTGTACACGAGGAAGCTAAATCCCTATTGATATGTGATGATG
GTGTGACCATTCAAGCTGCTGTAGTTCTTGATGCAACCGGTTTTTCAAGA
TGTCTTGTTCAATACGACAAGCCATATAATCCAGGATACCAAGTAGCTTA
TGGAATAGTGGCAGAAGTAGAAGAACATCCTTTTGATGTAAATAAGATGA
TTTTCATGGACTGGAGAGATTCCCATCTTAATGGCAATACAGAATTAAAA
GAAAGAAACAGTAAAATCCCTACGTTTCTTTATGCTATGCCTTTTTCATC
TGACAGAATATTTCTTGAAGAAACATCCCTTGTAGCTCGTCCAGGTTTAG
CCATGGGAGATATTCAGGAGAGAATGGTGGCTCGCCTAAGGCATTTGGGT
ATTAAAGTGAAGAGCATTGAAGAGGATGAGAGATGTGTGATCCCAATGGG
AGGGCCTCTGCCTGTACTCCCTCAGAGAGTAGTGGGAATTGGCGGTACAG
CTGGTATGGTGCATCCTTCCACTGGATATATGGTAGCAAGAACTCTAGCT
GCTGCACCAGTTGTTGCCAATGCAATAGTTCAGTACCTTGGTGGTTCTAA
GAAAGGCGCTTTGGGAAACGAATTGTCTGCAGAAGTCTGGAAAGATCTAT
GGCCAATAGAGAGAAGACGCCAGCGAGAATTCTTTTGCTTTGGTATGGAT
ATTTTGCTAAAACTCGATTTGCCTGGTACAAGAAGGTTTTTCAGTGCTTT
TTTTGACCTGGAACCTCGCTATTGGCATGGATTCTTGTCTTCTCGACTAT
TTCTTCCTGAACTATTCTTTTTCGGGCTTTCTCTTTTCTCAAATGCCTCC
AACACTTCTAGAATAGAGATCATGGCAAAAGGCACGGTTCCTTTGGTAAA
CATGGTAAACAATCTGATCAAAGATAGAGAATAGTCATTTTGTGATTTTG
ACTCATTGTGTTATAAATGTTTGTATGTTCTCTGATCATAAATCTAGTTC
AAAATGCTTGTGAAGTTACACC
Sequence Length
2022
Sequence MD5 Checksum
5909c8d4eeeec0c3387a8189de6e97a3
Relationship
- The LCYB is an instance of Genetic Marker MK000039 LCYB
- The Genetic Marker MK000039 LCYB is adjacent to Primer LCYb-F
- The Genetic Marker MK000039 LCYB is adjacent to Primer LCYb-R1
- The Genetic Marker MK000039 LCYB is located in Gene DCAR_020544
- The Genetic Marker MK000039 LCYB is located in Gene LOC108193045
Synonyms
- MK000039
- A9P11
Database Reference Annotations
Publication
- Just BJ, Santos CA, Fonseca ME, Boiteux LS, Oloizia BB, Simon PW. Carotenoid biosynthesis structural genes in carrot (Daucus carota): isolation, sequence-characterization, single nucleotide polymorphism (SNP) markers and genome mapping.. TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik. 2007 Feb; 114(4):693-704.
- Grzebelus D, Jagosz B, Simon PW. The DcMaster Transposon Display maps polymorphic insertion sites in the carrot (Daucus carota L.) genome.. Gene. 2007 Apr 01; 390(1-2):67-74.
- Cavagnaro PF, Chung SM, Manin S, Yildiz M, Ali A, Alessandro MS, Iorizzo M, Senalik DA, Simon PW. Microsatellite isolation and marker development in carrot - genomic distribution, linkage mapping, genetic diversity analysis and marker transferability across Apiaceae.. BMC genomics. 2011 Aug 01; 12:386.
- Salgon Sylvia. Phenotyping and pigment analysis in carrot (Daucus carota L.) and genetic mapping with SSR markers and candidate genes. M.S. Thesis. 2011. Ministère de l'Agriculture Montpellier
Is Analysis
False
Is Obsolete
False