XM_017398752.1 | CarrotOmics Tripal4

Gbkey

mRNA

Gene

LOC108224237

Model_evidence

Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns

Name

XM_017398752.1

Organism

Daucus carota subsp. sativus

Product

protein TPX2, transcript variant X2

Transcript_id

XM_017398752.1

Type

mRNA

Unique Name

XM_017398752.1

Sequence Residues

CTCCTCTCAGACATATATCCCCTCTTATTCTCAGTTGCCATATTGCATCT
CCCCTTTTCTCAACTCCACAACACACACACACACACACACACAATGGCGA
CGCTTAGTGAATCTTACAATAACTTGGTGATCGATGAGGTTTACGAGTTT
TCGGCGCCTCGGTTTTTCGATTTTATCCAAGGAGAGACCAAAGAAGAGAT
GCATCGAGCGGAGATCTGGTTCGAAACTTCTCTTAGTCACGCTCCATCTC
CTTTTATGCCAAAAATTAAGACCAGCAGAACTGCTGTTCTGCTTGAAAGC
CTTTGTGACTTCAGTGAGGCTGACCAACCGCACAAGGTACCAGAATCATT
AAAACCCCCACCCATTTCTGGATCAGAGACTGTGGCAGTTCCTACTTTGG
ATGTAGAGCAAACAATACCCCAACCTGATGGCAACCCCGTGCAAGTCATA
GAGGAAGTTGATTCAAATGGAAGTAAAGAAACACAAACTGGATCTCTTCT
TAAGCCGGCTAGTAGTGCCATAGAGATCACTTCTAAAGATAAGGAAACTC
TATGCACGCAAGGAAATGAAAGTGCTATAGCAAAAGCCCCTTCTCCATCT
GTGAAAGTTGCAGAAGAAGCTCATACATTAAGTTCCAAAGGACCTGAAGC
TTGTACGCCTAAACCACAAATTTCTCAAAAGTGTAAGCAACCACAGACTG
ATTCCAAGAAACAAATGACAGCAAGAAAGATTGCCAGTATGGTGAGGAAT
CCATCGTTACTGAAGGCAAAAACTCAACCCAAGATATCATCACAAGCTAA
AAGCAACAAACCTGAAAGTGCGAGAAGGAACAACAATTTTATGAACAAAC
TTTGCACTCCAAATTTTGCTCAAGAAAACCAACCCATAAAGAGGCAAAAA
CTGGATGCAGAAAGATCTAGACAGATTCTTAATATCAAACCTCAAACCTT
AATGCACAAGACAAGATCTGGTCTAGTCAGCAGCAGTTCCAGCTTATGCA
CATCAACTAATAAAACTCGTAAAGAGGACAGAAAGATTTATGCGCGGGAG
CCAGCAGCCCCTTTTGTTTCAATGGCAGAAATGATGAACAAGTTCCAGTC
GAACACCAGGGATATGTCACTATCTCGTCCCAGCAGTTCCCTTGCCTGCG
ATGCTGCTGGTCCTAGGAAGCCTAAACTCACATTGACAAGGCCAAAGGAA
CCTGAATTTGAGACATCTCAGAGAGTTCGCTCAGTTAAGATTAAGAGTTC
TGCCGAACTTGAGGAAGAATTGATGGCAAAAATACCAAAATTCAAGGCTC
GTCCAATCAATAAAAAGATTCTTGAAACTCCTACCTTGCCAGCGCTGCCC
AGAAGTAATCCACAGCTTCCAAAGTTTCAAGAGTTTCACCTGGAAACGAT
GACCAGGGCTAATAATAAGGCTGAAACCTCAACTGTAGCTTCAACAGAAT
CTGCACCTCAGAATGCACAATCGAAACCTCATCATCTGACAGAGCCCAAA
CCACCCACTCTTCAAACATCATTGAGAGCACGTCCACCCAGAATTAAAAG
TTCAGAAGAACTAGAGAAAGAAGAGCTTGAGAAAATTCCAAGGTTTAAAG
CCAGACCTCTGAATAAGAAGATTTTTGAAAGTAAAGGGGAACTGGGGGTG
TTCTGCAACACCAAAAGACAAGTCACCATTCCTCAAGAATTTCACTTTGC
AATAGATGAAAGGATTCCGCCACCAACAGCTGTTGCTGATTTGTTTGACA
AGCTTTCACTAAATACAGAAACTCGCCATGACAAACAACTTCCAAGAAAC
ACTGCACCAAACCCGTTCCATCTGCACACAGAGGAAAGAGGAGCCAAGAA
AGAAAATAAACTTGTGATGGAGCTACTGCAGAAGCAGTTGGAAGAGGAGA
AGTCTAGAGTTCCGAAGGCTAATCCATATCCTTATACTACTGACTATCCT
GTACTTCCACCAAAACCAGAGCCAAAACCGTGCACAAAACCAGAACCTTT
CCAGCTGGAGAGTTTGGTGAGGCATGAAGAGGAATTACAGCGTGAAATGG
AAGAAAGGCAGAGGATGGAGAGGGAAGAAGCAAGAATGAGACTGTTTAAA
GCACAGCCAGTCATGAAAGAGGACCCTATTCCAGTTCCTGAGAAAGTGCG
TAAGCCACTCACTGAAGTTCAGGAATTTGATCTACATGTAGAACACCGAG
CTGTTGAAAGAGCGGAATTCGATAAAAAGGTCAAGGAGAAAGAAGTAATA
TATAAGAGATACAGAGAAGAAGCTGAATCTGAAAAGCTGATGGAAGAAGA
GAAAGCATTGAAACAGCTGAGGAGAACACTGGTACCCCATGCAAGACCAG
TCCCGAATTTCGCCAATCCATTCTTACCACAAAAGTCATGTAAAGTGACA
AAGGCAAAGTCACCAAAACTGAAAATTCGGGAGAGGAAGGAAAGGCAGCA
TAACAAGATGCTAGCTACTGCAACTTCTAGTGCAGCGTCCAATATGAGGT
GATTGGGCAGAACCCTGAGGAGCTGATGATCTTTAGGGCCAAGTTTCTTA
GAACATGTACAGTCTCTGTACTATCTTTGCACACAAACTATATATGCTAG
TTATAGCTCCTTGTTGACAGAAGTCTAAAGGTCAATTTATTTGTTTGTAG
AACATCAAACTGTATGTCAGTAACAATTGATTAATTATTTTTGTGTTAAC
AAAATCAAGTGGGGAAATGTACCAATTA

Sequence Length

2728

Sequence MD5 Checksum

8d53a81f719f07cce131b715adcf6571

Relationship

The XM_017398752.1 derives from mRNA XM_017398752.1
The mRNA XM_017398752.1 is a part of Gene LOC108224237
The XM_017398752.1.exon1 is a part of mRNA XM_017398752.1
The XM_017398752.1.exon2 is a part of mRNA XM_017398752.1
The XM_017398752.1.exon3 is a part of mRNA XM_017398752.1
The XM_017398752.1.exon4 is a part of mRNA XM_017398752.1
The XM_017398752.1.exon5 is a part of mRNA XM_017398752.1
The XM_017398752.1.exon6 is a part of mRNA XM_017398752.1
The XM_017398752.1.exon7 is a part of mRNA XM_017398752.1
The XM_017398752.1.exon8 is a part of mRNA XM_017398752.1
The XM_017398752.1.exon9 is a part of mRNA XM_017398752.1
The XM_017398752.1.exon10 is a part of mRNA XM_017398752.1
The XM_017398752.1.exon11 is a part of mRNA XM_017398752.1
The XM_017398752.1.exon12 is a part of mRNA XM_017398752.1
The XM_017398752.1.exon13 is a part of mRNA XM_017398752.1
The XM_017398752.1.exon14 is a part of mRNA XM_017398752.1
The XM_017398752.1.exon15 is a part of mRNA XM_017398752.1
The XM_017398752.1.exon16 is a part of mRNA XM_017398752.1
The XM_017398752.1.exon17 is a part of mRNA XM_017398752.1
The XM_017398752.1.exon18 is a part of mRNA XM_017398752.1
The XM_017398752.1.exon19 is a part of mRNA XM_017398752.1
The XM_017398752.1.exon20 is a part of mRNA XM_017398752.1
The XM_017398752.1.exon21 is a part of mRNA XM_017398752.1
The XP_017254241.1 is a part of mRNA XM_017398752.1

Database Reference Annotations

Analysis

Is Analysis

False

Is Obsolete

False