XM_017398750.1 | CarrotOmics Tripal4

Gbkey

mRNA

Gene

LOC108224237

Model_evidence

Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns

Name

XM_017398750.1

Organism

Daucus carota subsp. sativus

Product

protein TPX2, transcript variant X1

Transcript_id

XM_017398750.1

Type

mRNA

Unique Name

XM_017398750.1

Sequence Residues

CTCCTCTCAGACATATATCCCCTCTTATTCTCAGTTGCCATATTGCATCT
CCCCTTTTCTCAACTCCACAACACACACACACACACACACACAATGGCGA
CGCTTAGTGAATCTTACAATAACTTGGTGATCGATGAGGTTTACGAGTTT
TCGGCGCCTCGGTTTTTCGATTTTATCCAAGGAGAGACCAAAGAAGAGAT
GCATCGAGCGGAGATCTGGTTCGAAACTTCTCTTAGTCACGCTCCATCTC
CTTTTATGCCAAAAATTAAGACCAGCAGAACTGCTGTTCTGCTTGAAAGC
CTTTGTGACTTCAGTGAGGCTGACCAACCGCACAAGGTACCAGAATCATT
AAAACCCCCACCCATTTCTGGATCAGAGACTGTGGCAGTTCCTACTTTGG
ATGTAGAGCAAACAATACCCCAACCTGATGGCAACCCCGTGCAAGTCATA
GAGGAAGTTGATTCAAATGGAAGTAAAGAAACACAAACTGGATCTCTTCT
TAAGCCGGCTAGTAGTGCCATAGAGATCACTTCTAAAGATAAGGAAACTC
TATGCACGCAAGGAAATGAAAGTGCTATAGCAAAAGCCCCTTCTCCATCT
GTGAAAGTTGCAGAAGAAGCTCATACATTAAGTTCCAAAGTAGGACCTGA
AGCTTGTACGCCTAAACCACAAATTTCTCAAAAGTGTAAGCAACCACAGA
CTGATTCCAAGAAACAAATGACAGCAAGAAAGATTGCCAGTATGGTGAGG
AATCCATCGTTACTGAAGGCAAAAACTCAACCCAAGATATCATCACAAGC
TAAAAGCAACAAACCTGAAAGTGCGAGAAGGAACAACAATTTTATGAACA
AACTTTGCACTCCAAATTTTGCTCAAGAAAACCAACCCATAAAGAGGCAA
AAACTGGATGCAGAAAGATCTAGACAGATTCTTAATATCAAACCTCAAAC
CTTAATGCACAAGACAAGATCTGGTCTAGTCAGCAGCAGTTCCAGCTTAT
GCACATCAACTAATAAAACTCGTAAAGAGGACAGAAAGATTTATGCGCGG
GAGCCAGCAGCCCCTTTTGTTTCAATGGCAGAAATGATGAACAAGTTCCA
GTCGAACACCAGGGATATGTCACTATCTCGTCCCAGCAGTTCCCTTGCCT
GCGATGCTGCTGGTCCTAGGAAGCCTAAACTCACATTGACAAGGCCAAAG
GAACCTGAATTTGAGACATCTCAGAGAGTTCGCTCAGTTAAGATTAAGAG
TTCTGCCGAACTTGAGGAAGAATTGATGGCAAAAATACCAAAATTCAAGG
CTCGTCCAATCAATAAAAAGATTCTTGAAACTCCTACCTTGCCAGCGCTG
CCCAGAAGTAATCCACAGCTTCCAAAGTTTCAAGAGTTTCACCTGGAAAC
GATGACCAGGGCTAATAATAAGGCTGAAACCTCAACTGTAGCTTCAACAG
AATCTGCACCTCAGAATGCACAATCGAAACCTCATCATCTGACAGAGCCC
AAACCACCCACTCTTCAAACATCATTGAGAGCACGTCCACCCAGAATTAA
AAGTTCAGAAGAACTAGAGAAAGAAGAGCTTGAGAAAATTCCAAGGTTTA
AAGCCAGACCTCTGAATAAGAAGATTTTTGAAAGTAAAGGGGAACTGGGG
GTGTTCTGCAACACCAAAAGACAAGTCACCATTCCTCAAGAATTTCACTT
TGCAATAGATGAAAGGATTCCGCCACCAACAGCTGTTGCTGATTTGTTTG
ACAAGCTTTCACTAAATACAGAAACTCGCCATGACAAACAACTTCCAAGA
AACACTGCACCAAACCCGTTCCATCTGCACACAGAGGAAAGAGGAGCCAA
GAAAGAAAATAAACTTGTGATGGAGCTACTGCAGAAGCAGTTGGAAGAGG
AGAAGTCTAGAGTTCCGAAGGCTAATCCATATCCTTATACTACTGACTAT
CCTGTACTTCCACCAAAACCAGAGCCAAAACCGTGCACAAAACCAGAACC
TTTCCAGCTGGAGAGTTTGGTGAGGCATGAAGAGGAATTACAGCGTGAAA
TGGAAGAAAGGCAGAGGATGGAGAGGGAAGAAGCAAGAATGAGACTGTTT
AAAGCACAGCCAGTCATGAAAGAGGACCCTATTCCAGTTCCTGAGAAAGT
GCGTAAGCCACTCACTGAAGTTCAGGAATTTGATCTACATGTAGAACACC
GAGCTGTTGAAAGAGCGGAATTCGATAAAAAGGTCAAGGAGAAAGAAGTA
ATATATAAGAGATACAGAGAAGAAGCTGAATCTGAAAAGCTGATGGAAGA
AGAGAAAGCATTGAAACAGCTGAGGAGAACACTGGTACCCCATGCAAGAC
CAGTCCCGAATTTCGCCAATCCATTCTTACCACAAAAGTCATGTAAAGTG
ACAAAGGCAAAGTCACCAAAACTGAAAATTCGGGAGAGGAAGGAAAGGCA
GCATAACAAGATGCTAGCTACTGCAACTTCTAGTGCAGCGTCCAATATGA
GGTGATTGGGCAGAACCCTGAGGAGCTGATGATCTTTAGGGCCAAGTTTC
TTAGAACATGTACAGTCTCTGTACTATCTTTGCACACAAACTATATATGC
TAGTTATAGCTCCTTGTTGACAGAAGTCTAAAGGTCAATTTATTTGTTTG
TAGAACATCAAACTGTATGTCAGTAACAATTGATTAATTATTTTTGTGTT
AACAAAATCAAGTGGGGAAATGTACCAATTA

Sequence Length

2731

Sequence MD5 Checksum

57bb652092bb09141a26f20cf8d7291d

Relationship

The XM_017398750.1 derives from mRNA XM_017398750.1
The mRNA XM_017398750.1 is a part of Gene LOC108224237
The XM_017398750.1.exon1 is a part of mRNA XM_017398750.1
The XM_017398750.1.exon2 is a part of mRNA XM_017398750.1
The XM_017398750.1.exon3 is a part of mRNA XM_017398750.1
The XM_017398750.1.exon4 is a part of mRNA XM_017398750.1
The XM_017398750.1.exon5 is a part of mRNA XM_017398750.1
The XM_017398750.1.exon6 is a part of mRNA XM_017398750.1
The XM_017398750.1.exon7 is a part of mRNA XM_017398750.1
The XM_017398750.1.exon8 is a part of mRNA XM_017398750.1
The XM_017398750.1.exon9 is a part of mRNA XM_017398750.1
The XM_017398750.1.exon10 is a part of mRNA XM_017398750.1
The XM_017398750.1.exon11 is a part of mRNA XM_017398750.1
The XM_017398750.1.exon12 is a part of mRNA XM_017398750.1
The XM_017398750.1.exon13 is a part of mRNA XM_017398750.1
The XM_017398750.1.exon14 is a part of mRNA XM_017398750.1
The XM_017398750.1.exon15 is a part of mRNA XM_017398750.1
The XM_017398750.1.exon16 is a part of mRNA XM_017398750.1
The XM_017398750.1.exon17 is a part of mRNA XM_017398750.1
The XM_017398750.1.exon18 is a part of mRNA XM_017398750.1
The XM_017398750.1.exon19 is a part of mRNA XM_017398750.1
The XM_017398750.1.exon20 is a part of mRNA XM_017398750.1
The XM_017398750.1.exon21 is a part of mRNA XM_017398750.1
The XP_017254239.1 is a part of mRNA XM_017398750.1

Database Reference Annotations

Analysis

Is Analysis

False

Is Obsolete

False