Carrot Genome Assembly DH1 v3.0 Tandem Repeats annotation by trf
Name
Carrot Genome Assembly DH1 v3.0 Tandem Repeats annotation by trf
Type
Analysis
Description
Tandem repeat detection with Tandem Repeats Finder version 4.07b
Software Name
Tanden Repeats Finder
Software Version
4.07b
Data Source Name
Carrot Genome Assembly DH1 v3.0
Relationship
The Analysis Carrot Genome Assembly DH1 v3.0 Tandem Repeats annotation by trf is a part of Genome Assembly Carrot Genome Assembly DH1 v3.0
Publication
- Benson G. Tandem repeats finder: a program to analyze DNA sequences.. Nucleic acids research. 1999 Jan 15; 27(2):573-80.
- Coe K, Bostan H, Rolling W, Turner-Hissong S, Macko-Podgórni A, Senalik D, Liu S, Seth R, Curaba J, Mengist MF, Grzebelus D, Van Deynze A, Dawson J, Ellison S, Simon P, Iorizzo M. Population genomics identifies genetic signatures of carrot domestication and improvement and uncovers the origin of high-carotenoid orange carrots.. Nature plants. 2023 Oct; 9(10):1643-1658.
Biological Sample
SAMN03216637
File
| File | Type |
|---|---|
| DCARv3 Tandem Repeats Annotation | GFF3 |
Organism