XM_017376015.1 | CarrotOmics Tripal4

Gbkey

mRNA

Gene

LOC108205895

Model_evidence

Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns

Name

XM_017376015.1

Organism

Daucus carota subsp. sativus

Product

probable polygalacturonase At1g80170

Transcript_id

XM_017376015.1

Type

mRNA

Unique Name

XM_017376015.1

Sequence Residues

ACAACCGCAGAACAGAGTAGAGATAAAGTGAAAAAGCCAAGGAAGAAGCT
GCTCGCTCCCTCCACAGCTAAAGTTATGATGATATACACTTGGATTTTAT
ATTCAGTATACATCTTCTCAAATTTCAAGGATGCTCTGCTGGATTCTGCA
ATTACAAACATACCCAGATCAAGAAAGACAACATTAGTGTTGTATGTGAA
TGAGTTTGGTGCACAAGGAGATGGCTTCACTGATGACACTGAGGCTTTGG
AAGAGATCTGGAAAGTTGCTTGTTCTTCATCTTTAAGAGCAGAAATTGTA
ATCCCCTCACAATATTCAGTTTTGGTTCGACCAATTCAGCTTGCTGGGCC
TTGTCGATCCCGGGTGACTATAACGATTTTGGGCAGCATATTAGCCCCCA
AAAGCCCTGATGTTTGGGATGGTCTTAATAAACAGAAATGGATATATTTC
ACTGGAGTGAACAATCTTCTTGTACAAGGGCATGGTGTAGTTAATGGGAT
GGGCAGGGAATGGTGGGTTAGATCTTGCAAAGTTAACACGACAAATCCAT
GTCAGCATGCTCCGACGGCCATGACATTTCATAGATGTGAGAATCTGAAA
GTTAGAAATCTTATGATAATAGATAGTCAACAAATGCACATGGCTTTCAC
TAGTTGTGTTAAGGTTGTGGCGTCACGATTGAGAGTGTCAGCGCCTGTGG
CTAGCCCCAACACAGATGGGATCCACATAAGTGCTTCTACTCGTGTCGAA
GTTAAGAATACCATCATACGTACTGGAGATGATTGCATTTCTATAGTGAG
CAACTCTTCACGTATTCGTGTTAGAAACATCACTTGTGGCCCTGGCCATG
GAATAAGCATTGGGAGTTTGGGAAAATCAAACACATGGTCTCAGGTGCAC
GATGTAAGGGTGGACGGAGCTCATTTTTTAAATACAGAAAACGGGGTGAG
GATAAAAACATGGCAGGGAGGTAGCGGTTTTGCCAGCCAGATTACATTTA
AAGATATTTGGATGGAAAATGTTTCAAATCCAATCATAATTGATCAGTAT
TATTGTGATTCGCGGTCAGCATGTCAAAACCAGACTTCGGCTCTTCTGGT
GAAAAATATATCATACATACACATCAAAGGAACTTCAGCTACGGAGAATG
CTATAAGATTTGCTTGCAGTGATACCTACCCATGTCAAGGGTTATACCTG
GAAGATATACAACTTGTACCAGAGTCTGGGGGTGTATCAAAGTCATTTTG
TTGGGAAGCTGAAGGCTCAAGTTCAGGTCAAATATACCCGCCTCCTTGCT
TTTCATGTGGAGGAAGCTTTATTGATCAGAAAGTAAGGTCTGACCCCATG
CTCAAATCTATCTGAATATACCGCAGTTCCACTCTATGCATGCTCTGAGC
AATGTGAGCAATCTACTAGCGCTTGAACCACAAAGGTTAGACTGTATATA
GAACGACCCCAATGAGTATTAGGCCAGCTAGATTGTGTTTCTTGGTTTTG
TTCATGGTACATATATCATGCAGACAATTCTGATTTCTGATTGAATTCAC
AGAGCTGTGATTTGTGGCTTGGCAAATTTAGATGCAGTCGTGACAGCAAC
AACATACTGTAATGTGCACAAGTACAGGAACTCAAGTTGAAGTTGATTGA
ACTCAGTATCTTGAACAACCTAGAGTAGAGTCAGAGATCTGTGAAAAACT
AATGAGGCGACTTCAAAATTTACAAGCTGCTTTATATATTTTTGTAAAAT
GAAAGTATTATTAGATTATATTAGATCTAACAAGTATAACTTTGCTAAA

Sequence Length

1799

Sequence MD5 Checksum

cac13cabba258c75bdfd156fc271daba

Relationship

The XM_017376015.1 derives from mRNA XM_017376015.1
The mRNA XM_017376015.1 is a part of Gene LOC108205895
The XM_017376015.1.exon1 is a part of mRNA XM_017376015.1
The XM_017376015.1.exon2 is a part of mRNA XM_017376015.1
The XM_017376015.1.exon3 is a part of mRNA XM_017376015.1
The XM_017376015.1.exon4 is a part of mRNA XM_017376015.1
The XM_017376015.1.exon5 is a part of mRNA XM_017376015.1
The XM_017376015.1.exon6 is a part of mRNA XM_017376015.1
The XM_017376015.1.exon7 is a part of mRNA XM_017376015.1
The XM_017376015.1.exon8 is a part of mRNA XM_017376015.1
The XM_017376015.1.exon9 is a part of mRNA XM_017376015.1
The XM_017376015.1.exon10 is a part of mRNA XM_017376015.1
The XP_017231504.1 is a part of mRNA XM_017376015.1

Database Reference Annotations

Analysis

Is Analysis

False

Is Obsolete

False