XM_017375343.1 | CarrotOmics Tripal4

Gbkey

mRNA

Gene

LOC108205400

Model_evidence

Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns

Name

XM_017375343.1

Organism

Daucus carota subsp. sativus

Product

hydroxyproline O-galactosyltransferase GALT3

Transcript_id

XM_017375343.1

Type

mRNA

Unique Name

XM_017375343.1

Sequence Residues

ACAAAACTGGAAGCGGTGAGAAGTGGAGAAACTACGAAAACGACGTCGTG
TCCGAGCACAAACAGCAAAACATGAAGAAGTGACAAGGCAGCTCCCCAGC
TCAAAGTCTAAAGATCCATGTTGCAAAAATCAACAAGTATTTGAAATACC
CATCACAGGGTATGGAGATAAGGGGAAGGTTGGTACATTAGGATGAAGTT
CGATACGTGGCGATGCGATTTTTCAGGATTGGTGGTTAATATTGCGTGAA
GCTATTGTTTTTGTGAGAATTTGTTAGAATCGTAGAAATTGATTTTTGGG
AACAGGGCTAGTATCGAATTTCAATACAAGGGTCCTTTGAGTTCAGTTAT
ATGTATGTGGAGCGATTGTATGTTTAAGTTTGAGAGTTAGTGGGGATGAA
GAATTGGTCTGGAGGAGTGTTGATAGTAGGACTTGGTTTGATTTTACTTC
TTCGGTACAGCTTTGTAGGAAAACAGCCGCATAAGCAGTCAGCTTATGAT
TTTTTTAATAGCCATTTGTCTAAAGATTCTACTGAGAGTGGAGATAGTTC
TAATACAGTGAAAACTGAAACTGTCCAAAATCCTGAGAAAAGGCCCCACT
TTGTTGACGTCGAAGGACTTGATGACCTCTATGCTTTTAGGAATATGTCT
GAAGAAGAGTCAAAGGTTTTGCTTGTTTGGTCTCAGATGCGTATGCTTCT
TTCAAGGTCAGATGCTTTACCTGAAACATTTCAAGGCATTAAAGAGGCTG
CTGTGTCATGGAAAGAGTTATTGTCATTGATTGAGAAAGATAAATCCTCC
CAGTTGAATGATAACATCCAGAATGACAAGAAATGCCCTTACTATGTTGG
CATGCCGAGTGGTTTGAATACATCAACATCTGGTAGTGGATACATTCTTG
AAATTCCTTGTGGTTTAGTTGAGGATTCGTCGGTCACGTTAATAGGAATT
CCCAATAGGGGACAGGGAAACTTTACAATCGAACTTGTAGCCTCAAAATT
TCCGGAAGAACAAAATCCTCCAATAGTTTTGCATTTTAATGTATTTTTAC
CTGGAGAAAATTTGACAAAGGAGCCCATTATAGTTCAGAATACATGGACC
AATGAGACTGGTTGGGGGAAGGAAGAAAGGTGTCCTAATCATCATTCCAT
TAACACCACGAACGTTGATGGACTGGCAAAATGTAACGAAGAAGTCGCCA
CAAGTGCTGAAGAAGAAATTGCTCATGCTAGTAATCTTAGTGTCAACCAA
TCATCAAATGTTTCCAGTGGGAGTGCTCATGTCAGTGCCAATTTTCCATT
TTCTGAAGGTAGCCCATTCACTGCCACCTTGTGGACTGGTGTGGAGGGAT
TCCACATGAGTGTGAATGGACGGCATGAAACATCTTTCGAGTATAGGGAG
AAACTTGAACCATGGTTGATTAATGGAGTTAGACTATTGGGTGACGTGGA
ACCTGTGTCTGCCATTGCTAAAGGTTTGCCTGTTTCTGAAGATTTGGATT
TGATTGTAGATGTTGAGCACCTTAAAGCTCCAGTAACTGCCAAGAAAAGG
CTTGTACTGTTAATTGGGGTATTCTCTTCTTGCAATAATTTTAATCGGCG
TATGGCATTAAGGAGATCCTGGATGCAGTACGATGCTGTACGTTCCGGGG
AAGTGGCAGTTCGGTTTTTCACTGGCCTTCACAAGAATATTCAAGTCAAC
TTTCAGCTGTGGAAAGAATCTCAAGCTTATGGAGATATGCAGCTTATGCC
TTTTGTTGATTACTACAGTCTGATCAGTTTGAAAACGATTGCAATATGCA
CTATGGGGACCAAAATCCTCCCAGCTAAATATATAATGAAGACAGACGAT
GACGCTTTTGTGAGGATAGATGAAGTTCTGTCTAGTCTCAAGCAAAAGGC
TTCTGATGGCCTCTTATATGGTCTAATATCTTTTGAGTCAAAGCCCCAGA
GAGACGCGGAAAACAAATGGTTTATTAGTACCGAGGAATGGCCACATGAG
AGCTACCCGCCATGGGCTCATGGTCCAGGTTATATAATATCCAGAGATAT
TGCGAAATTTATTGTGCAAGCGCACCAAAAAAGAGAGCTCAAGCTTTTCA
AATTAGAAGATGTATCCATGGGAATATGGATCGAAAAATTCAAAGAACGT
GGTCACGAAGTGCAGTACATTAGTGATGAACGGTTTTATAATGCGGGATG
CGAGCCTAATTACATCCTCGCGCACTACCAAAATCCGCGAATGGTCTTAT
GCCTGTGGGAGAAGCTGCAGAAAGAACATAAGCCCGACTGCTGTGAATGA
CTTAAACGGACGTAATCGACAACAATGACACCTGAGTTTAAGTTGTATGC
AAATGTACTTTAACTTAGGCATTAGATGTGTACCGTTTTGATTGTTTGTT
GTACAACTCTGTCATATGATTCTGTTATAGTGACATTTATATTATCTTTA
AAAGTTATACTAA

Sequence Length

2463

Sequence MD5 Checksum

e31eaa2ed58c352b42c0c8bf37e4ad61

Relationship

The XM_017375343.1 derives from mRNA XM_017375343.1
The mRNA XM_017375343.1 is a part of Gene LOC108205400
The XP_017230832.1 is a part of mRNA XM_017375343.1
The XM_017375343.1.exon8 is a part of mRNA XM_017375343.1
The XM_017375343.1.exon7 is a part of mRNA XM_017375343.1
The XM_017375343.1.exon6 is a part of mRNA XM_017375343.1
The XM_017375343.1.exon5 is a part of mRNA XM_017375343.1
The XM_017375343.1.exon4 is a part of mRNA XM_017375343.1
The XM_017375343.1.exon3 is a part of mRNA XM_017375343.1
The XM_017375343.1.exon2 is a part of mRNA XM_017375343.1
The XM_017375343.1.exon1 is a part of mRNA XM_017375343.1

Database Reference Annotations

Analysis

Is Analysis

False

Is Obsolete

False