DCAR_009485 | CarrotOmics Tripal4

Cds

>DCAR_009485cds ATGTCTTCTTCTGATGCCAAGAAACCCCTGAAGAAAGAAAAAGTTGAAGA TGATGATGATGAAGAGCTTCTTGGGACTCTCTTGAAGAAAAAGAAGAAGC CAGCAAGTAATGCTGCTAGTCCTAAAGGAACTCAACCCAAGAAGCAGCAA CAATCTAAGGTTAAAAAAGAAGAAACATCTGATGATGATGATGATTTTAA ACAACCCATTGTAAAGAAGGCCTTGAGTAAGGTCAAGGAAGAGACTTCTG CTAAAAAAAGTTCTGCCAAGATTGATGTCAAGAAGAAGAAAAATGTGAAG GAGGAGAATAAGAGTGTGGGCAAAAGTTCTGAGCAGAATGGGACTAAAAA GGTTAAGAAGGTGTATGATATGCCCGGACAGAAACGAGACCCGCCTGAGG AGAGAGACCCATTGCGGATATTCTATGAAACTTTGTACAAGCAGTTGCCT AACAGTGAAATGGCGGCTTTCTGGATGATGGAGTATGGTCTGCTGCCCAA GGAAGTGGCGAAGAAAGTTTATGAGAAGAAACTGAACCGAACTCAGCAAC AGAAACTAGGTTCACCTATGAAAAAAGTCATCACTGTAAAGAAACGTGAT GGATCTGTTACTATTATTAAGAAGAAAGTAATATCATCCTCCACTCCGAA GAAGCAGACACCAGAGGCAAAAGGTTCTTCAAAACCGTCCAAGAAGCGAA AGATTGATGAAGATTCTGACACTGGATCAGATGATGACTTTGTATTGTCA CACAAGAAGTCAAAGAAACCAAAGAAATGCTGA

Locus_tag

DCAR_009485

Name

DCAR_009485

Organism

Daucus carota subsp. sativus

Pep

>DCAR_009485pep MSSSDAKKPLKKEKVEDDDDEELLGTLLKKKKKPASNAASPKGTQPKKQQ QSKVKKEETSDDDDDFKQPIVKKALSKVKEETSAKKSSAKIDVKKKKNVK EENKSVGKSSEQNGTKKVKKVYDMPGQKRDPPEERDPLRIFYETLYKQLP NSEMAAFWMMEYGLLPKEVAKKVYEKKLNRTQQQKLGSPMKKVITVKKRD GSVTIIKKKVISSSTPKKQTPEAKGSSKPSKKRKIDEDSDTGSDDDFVLS HKKSKKPKKC*

Sequence Coordinates

DCARv2_Chr3:7974874..7978994+

Type

gene

Unique Name

DCAR_009485.gene

Sequence Residues

ATGTCTTCTTCTGATGCCAAGAAACCCCTGAAGAAAGAAAAAGTTGAAGA
TGATGATGATGAAGAGCTTCTTGGGACTCTCTTGAAGAAAAAGAAGAAGC
CAGCAAGTAATGCTGCTAGTCCTAAAGGAACTCAACCCAAGAAGCAGCAA
CAATCTAAGGTTAAAAAAGAAGAAACATCTGATGATGATGATGATTTTAA
ACAACCCATTGTAAAGAAGGCCTTGAGTAAGGTCAAGGAAGAGACTTCTG
CTAAAAAAAGTTCTGCCAAGATTGATGTCAAGGTTTGTTTTTGAACACAC
ACTCTCTCTCTCTCCTCCTTCCCTCTCCCTGTCCCTCTCTCTCCCTCCCT
CTCTCTCTCTCTCTCCTGTGGGTCTGTTTTCTTTAATTTGAATGTATGTT
ATAATGTAGAAGAAGAAAAATGTGAAGGAGGAGAATAAGAGTGTGGGCAA
AAGTTCTGAGCAGAATGGGACTAAAAAGGTTAAGAAGGTGTATGATATGC
CCGGACAGAAACGAGACCCGCCTGAGGAGGTATGTTTTCCTCCATCTTTT
TTAGTATAATTATACTGCTTAAGATTTCATTAAGATGAATTTTGGTTGAT
TTTTCGGCGATGGCTGTTTTCTGTATTGAGTTTTTCAGAGAGACCCATTG
CGGATATTCTATGAAACTTTGTACAAGCAGTTGCCTAACAGTGAAATGGC
GGCTTTCTGGTAAGCAGTTCTGCTCCAAATTTGTTATCATATATGGTATT
GAGTATTGACCCTAATTTGATGGTTAGATATAAAGGCCGGATTTTTATCC
TTGTTGTCTTGTGAATATACCTGGACAAGTGACCTAGTTTGGCTCTTATA
TATGTGTTCATGTATCGTTGAGCTTATATTAAAATTTTTTGGTGACTTAT
GTCACCCTGATAAACAAAGCCTAGATCTATTTTTCTTTCTTTCAAAAACA
CAGTATATTCATGTTGGTGTCTTTGCTATCAATCTTTAGGACAAACTTAA
ATATATGTTCAACATCAGAAGCATTTCTTTGAACTATTCTTTGTTCTTCC
ATTAAAATTTGATCACAGCATTACCAGCTTTAAGAGAATTAAATCTGAAT
AATGTACGAGCAAGTAAGTAGGATAACTTATGAAAGCAATGAGCTGCTTT
TAAAGATATTTATAGGGTGGGAAAGGATGGATTGGGTTCAACAGAACTCT
CGTCAACTGTGTTTGTCAATGTTCCAACAGGACTGAAATATTTAATCTTG
AAGCTTCCAACATCAAGCAAATTTGGGTTAGATTGACAATCCTTGCAGTG
TAATTGATCTTAATGAATCAATGAGTGATCTACAGACAAGTCTTAGAATC
ACGGAATCACTGTGTTTACCTATTTTGGACTATAAGTCTATACCTAATCT
GATTTGCTCTCATGTGTCATAAATAGAAGTTTAATGTGAACACAGGTAAT
GTAAGTGCGGAGATAGGAAGAACAAATAGGCATTTTGGATAGTAGGCACG
AAGAAAAGCATGTGAACTCAATAGTTACGGGTGCAACTGCACTCAAGTGA
AAGTAATAGAACTGAAGAGATGGCCTTGGTATTGTTTTGGCGGTTCTCCA
ATCATAAAACAATTAGGAACAGTCATTTTAAAAGTTACATGGTGAAATAT
CTCCACCCCACTGACATTCGTAATATAGTAACCATTGAAACCTCCCCCGT
CCCGTCCTAAATCTAAGCACATACACACTTGGCACTATCTTCTCTTTCCT
CTATTATTTTTTGACGAACTCTTTCCTCTATTTAGTTGTGTGCAAGTAGT
ATTATATTACTACTGGGTAGTTGGCACACACATTCGGTCCATTCGAAGCA
GAGAAAATGCCAAACACTCTGTCTCAGGATTGTGTGTAAGCAGATACTTG
TATTTTGATATCCATGTCGTGTTCTTGTTTGACCTTGGTCAGGCACTAGT
ATCTCAATCATTTATTCATTTTGTTTAAGAAAGTTATGCTCGATGTTTGA
TGATGGGGATTTATATTAATGTCACTTACTACTTCAGTTGTTCCGTCGTT
GATTATACTAACTATAAGAATTCTGTCATAATAACTTATAATAATTTCAA
TTTCAGCTTCTACTTTATTACAGTTTTTTTTTTTTTTTTGTGAATGCTTG
ACTATTATTTTTATTGTTGGATTTCTTTTAATTTAATACAACCCAGTTTT
GATATCGCCAGAGTCTTAGAGCTACTATTAAATAACCCTAGTCCGATTTT
GGCCATCATCTCTGGAAAGTTAATTAAATCAACCTACTTATATCCCTAGC
GCTGTAGCATAGTAGATTCCTTTTTTATCCTGGAAAAAGGAGGTTGAGAA
TTTGATCCTTGGCGGAGGTAGGATGTGTTATCTGTAAGTCCTGCGTACTT
GAATTTCTACAACTGACCAGAAGAGAAAAAACAAGTAACATATCTACAAT
CTAATAACCTCTCCAATCTTTAGCCGACAACTTCGGCCAATAACATATAT
ATTAAGAATTCCAGCCGCCCAATNGGTGTGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGTGTTCCTGTACTATTCATCCCGCTGCCATCACAA
CAAATTAGTGGCTGACAGTTTTTCTGAAAGATGGGATATCTAATCCCCTT
CCTCCGAGTAAAGAGTAAAAATTATCATAGTGATGCGATTAATGTCGTGC
AGGAGGATTCCGATGAGATGTAGGATCTTTGTGGAAATTTAAATAAACCA
ACGTACAGTTTAAGAAAATTTCTTCATCTCATGCTGGAGGATTCCTATGA
GACCTTAAGATCTTTGTGGAAATGTAAATAAACCAATGATACAGTTTAAG
AAACTTTCTTCAAGTTTCTCTTCATTACCTCTACCCCTCATTTGAACACT
CAAGTTTCCCTCCTTTGTTGACTACTATTATTTCTTGCCCTTCTGTTTTC
CAATAGCCACCATCATTTCAGACGTCTAACTGAACTTAAGTTTAGACTTC
AGGGTTTCAGGAAAAATTCTACACTTACACAGATATGATAGGAATAATCA
TATAAATCAAGTTTGAACTTTTCTCTGTGGAAACTACTCTTTATTCTCAA
GAGTCCCCTTTCCAAAAAAAAAAAAGAGTAATAAACTCCCACCAGCTGAG
AGTAATTAACAGAAAACATATCCAGTATACTGTATATCCATGTTGTGGCC
TAAGAATGAAGCTGATGGAAACTTGTATGCCATTGTTGATGCTAGTGCTT
ATGATCTGTCCTTGGATCAACAGTAGTCGCTTCGGTCCAGTCTATACTCG
AATAATAGTTAGGGGATGTCACGGGAGGACGACGGGGGCTTTCACCTTTT
TCCTCTTTCTATCCCCCTGATGTGAGTGTGGGCATTTTAATTTGATTTTA
CAATGGATTATATTTAACATTTTTGAACCTTTTTCCTATTTCTATTCCCC
TCATGTGAGTGGGGTCATTTTTAAAATTTGATTTCACAATGAATTGGAAT
TCAACATTTTTGATGTTTGAAACGACAACGCTTGGGAAGTCAGGTAAGAA
CTCTCCTCAGTCTGAAGTCTCAACCCCCCTTTCTACCTGACCCTTCTTTC
ATATTTACCTGGAAATCAAATTAACTCTCTCAACCTTTCGTCATTTTTAA
ATGGCTGAGGTGTCTTAACTTGGTAAATCTGAGATTGCAATTGACAATAA
AAGACCATTATATTATCAACACGTGTCTGTGAGTTGATAATATAACGGTC
ATCAATCTCCAATATAAGATTACTGTGATTTGACCTTTTTTGCTGTTTAA
ATGTATACAGGATGATGGAGTATGGTCTGCTGCCCAAGGAAGTGGCGAAG
AAAGTTTATGAGAAGAAACTGAACCGAACTCAGCAACAGAAACTAGGTTC
ACCTATGAAAAAAGTCATCACTGTAAAGAAACGTGATGGATCTGTTACTA
TTATTAAGAAGAAAGTAATATCATCCTCCACTCCGAAGAAGCAGACACCA
GAGGCAAAAGGTTCTTCAAAACCGTCCAAGAAGCGAAAGATTGATGAAGA
TTCTGACACTGGATCAGATGATGACTTTGTATTGTCACACAAGAAGTCAA
AGAAACCAAAGAAATGCTGA

Sequence Length

4120

Sequence MD5 Checksum

24d4861b9eee3259315ccb93f467dd33

Relationship

The mRNA DCAR_009485 is a part of Gene DCAR_009485
The Genetic Marker MK002191 ESSR-086 is adjacent to Gene DCAR_009485

Database Reference Annotations

GFF_source:.

Publication

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Analysis

Is Analysis

False

Is Obsolete

False