DCAR_004024

Cds

>DCAR_004024cds ATGGATTTCAAGCTTGATGATGATTTTGGGAAAATATCATCATTCAATGT AGACATGTCAGACCTCGATGTCTCTTCCCCAGTGAAAAAGACTGGAAAGC CTAGTGGGAAGTCAAAAGAAGTATCAGCAGAAAAAAAGACTCAAGGGAAA TCAGATCGGTCGACCTTCCAGTTTGATTTTGATGGGGGAAGCTTAAATAC TGTTGACACCAGGAAAATTTTGAATAATAGATCAAGGCTTCAAGATATGG ATGTGACCAAAGGATTTCGGACTGGAAGTAAAAGTGAGGACCTCGATAAA TTCAGGAAGCTTGACAACCAAGTTGCAAAAACTGGAAGAATATTACCAGT TCTTCCAAAGGCAACTTCGAGAGAGCAAATTGAAGGCTGCTCAGTTCAGA TTAGAAGTCAGGGAATCCCTAAAGATCTCACCACCAATGGGGAAGGATAC ATTTCAGATAACAGCAGAACTTTAAAGGGCATGCCAAGGCTACATGACAA GGATGCTGCAAAAGGGGAACCTGCATCATCTGGAAGTGGAAAGAATGTAA AGGACCTCAATACTATCAGCTTGCATGTTGAACCTTCCAGTTCAAATGAG CAGGCAAATGCATCTGCTTTGCTGCTTGGCCAATATCCTAGACTTCCACT TTCAGGCATGCAAGCTCTCCAGAACAATATCGTTGCTTCTGAAAACCAAA AAGTGCCTGACCTTAAAGACGGCTTTAGGACATCTGCTCCTTTTAAGCTA AATAATTTGAGGACTACAGAAAAAGTTCAATCCCCATCAAACTCAACACT GCAGAAGGATCCTAGATTGGTGACCAACTCAAGACAAGGTGTAGACTTGA AAGAAAACACAGGATCTAGAATGGGGCATACTGCAGACACAAGGAAAAAA GCATCATCTAGCCCAACGCTAAAGAGGAAAGAGATTGAGGATTCTAGTGC AAGTTTACCTATGTTGAAACCAACAAAACGTCTGTTGAAATCACCTAGCG GAAGCAGCGATGTTAAAGAATTGTTGGAAAATTTTGTTGACAGGGAGCAT AATTGTGATGGAAACACAGAGAATGGTCTTAGTAAATCCCTGAGTTCGTT TCTACATTTCCCTCAGGAAGTACACATGAATGAACTAGAAACCATTCTAG AAATAGACAATGACACCAATGTCGAGATAGCCCAAGCATGTGCAAAGGAG CTTGATGATTTGGCCAATATGCTGAAAAAGAAACACGAGGAAGCGAAGGA GATTTTGGTTCGAGCTGTTGTCAACAATAATAAACTGCTGATGCTGAACC ACCCCATAGCTATCCATGAGAAAAAGATATCCTATCAAGTCTTAACCATT TCATTATATGTGTGTTGCTAA

Locus_tag

DCAR_004024

Name

DCAR_004024

Organism

Daucus carota subsp. sativus

Pep

>DCAR_004024pep MDFKLDDDFGKISSFNVDMSDLDVSSPVKKTGKPSGKSKEVSAEKKTQGK SDRSTFQFDFDGGSLNTVDTRKILNNRSRLQDMDVTKGFRTGSKSEDLDK FRKLDNQVAKTGRILPVLPKATSREQIEGCSVQIRSQGIPKDLTTNGEGY ISDNSRTLKGMPRLHDKDAAKGEPASSGSGKNVKDLNTISLHVEPSSSNE QANASALLLGQYPRLPLSGMQALQNNIVASENQKVPDLKDGFRTSAPFKL NNLRTTEKVQSPSNSTLQKDPRLVTNSRQGVDLKENTGSRMGHTADTRKK ASSSPTLKRKEIEDSSASLPMLKPTKRLLKSPSGSSDVKELLENFVDREH NCDGNTENGLSKSLSSFLHFPQEVHMNELETILEIDNDTNVEIAQACAKE LDDLANMLKKKHEEAKEILVRAVVNNNKLLMLNHPIAIHEKKISYQVLTI SLYVCC*

Sequence Coordinates

DCARv2_Chr1:44054156..44059392-

Type

gene

Unique Name

DCAR_004024.gene

Sequence Residues

ATGGATTTCAAGCTTGATGATGATTTTGGGAAAATATCATCATTCAATGT
AGACATGTCAGACCTCGATGTCTCTTCCCCAGTGAAAAAGACTGGAAAGC
CTAGTGGGAAGTCAAAAGAAGTATCAGCAGAAAAAAAGACTCAAGGGAAA
TCAGATCGGTCGACCTTCCAGTTTGATTTTGATGGGTATGTATATATTTT
GAGCGCCTGTGACATAGCTTCAGCAAAGCTTCATAGAATACTTTTATTCC
TATAATTAGCAATACAAATGTTTATAATTAGCTTTGGTGAGTTTTCAGTT
GGGTTCTTCTCAGATCTCAATCACTCTTCTAATATATCCTCTGTACTCAG
GTTTGACGATTTTAATTTCGGGCCAAGCTCAGGCAAGATATCTAAGCAAA
CTAATGCAAACCAAGATGCAGCACGTTCTCCAAGCCTAAGTGGGAGTCTA
GGATTTGGGACCCACTTTAAAGAAACCATTGGAGCATCTGAGGGAGATGC
CACCTCAAAGTTTGATAGCCAACTTGGTGGAGAACCGAATTCCTTGAGTA
AGGAGAAGTCGCACACATCTTTGACGGATGTGCAAATGCCTTCAAAATCA
GAAGTAGCCAAAGATGAAGCTACTAACCTGGTGGGACCAATTTCACCACA
GAAACCAATTTGCGGAAGCACAAACGAAACAGACCACGAAAAATGCGAAG
GAGAGAGAAGTACTCAGCAAGAACCAGATAAAGAAACATGTCAGAATTTA
TCTCTTCTATCTCTATCTGAGAATTCTTCAAGTCATCAGATTCCTCATAA
TCCAACAGAGGAAGTTGGTTGTTTAGTTAGAAAGGAAAGTACATACTCTG
ATAGTGAACAAAGTATATCTGGTGAAAAAACTGATATCGGGTTCAAGTCT
GGGAATTTACACTTGGACAAACTGCCAGTAGATATAGCATGCTCACAGAG
CAATGATGGTGAAAATAGCGAGTTTTCAGGTGATAATCCTGTCCTTAAAG
ACAACAATGATGATGCTGAACCAGCTCAAAGCGGTACACAGATTGAACAA
ACTTCCACAACAACCGCGTCAAAGAAAATGCTCCATGAAATAGAGACTGA
TGGGGAGACTATGAATGTGACTTCAGAGCTTGTTGCAACACCATCAGATA
CAATGGACACAATTATGTAAGAGTACTGATCTTCTCAATTGGCAATCAAA
CCAAAATAATTGAACCACTAATTTTGATCCTAGGACAGTACGACAAGATA
TGTGTGTGTGTGTGTGTGTGTGTGTGTACTAATTTATCTGTGACTGATGT
TTTGTTAGAAACTTAAGCGAGACCGGAATGTGCTGATATATAATGTTTGG
TTGACACGTAAAAAAATAGTGGACAATCAGTTTTTATACATTTTTTTGAA
CGATGATTGTTAGTTTTGTTTGTATACTAGAATAAATGCCTTACCATGAC
ATATGTTATGTTGATGCAGTGAAGCCACAGGTGATAAGGAATTGCCAGGT
CCAAAACGGGTAAAAAATGTTGTCAGGTCAAAGTATTTCAAGGGATCAGA
TGAAGCGAAGTTGCAAGTACAGCAATCGTCAGTAACTCAGATAAATGCTG
CAGCCTTCGATAGACAAAGGATTCAGACATTCCAATTAAGTCCTGCAGAT
GAAGGGTAAGAGATACTGCAAACATTAAATAATATAGCAATTAATGAAAT
GAAAACATCCAACTGAATTTTGAGCATAGAACTTGACATAAGATGCATAA
GTGGGGTGATTTCCTAATGCTAGGCTGGTAGGCACAGTTATCAACATTAT
TTGTAAAACATTTAAAGTTTTATGTGTATATATTTCTTCACTTCTTGCAG
TGCAACAATGGTTGATAAAGCAATGCCAGTAAAGGAAAGTTTACCAACCA
GCAACTCTGAGAGTTTTCAGGGAGATGAAACTAAATCTCAACTGCAGCAG
GCATCATTATCCCAGGTGAAGATTGGAACTATCAGTAGCCAAAAGATCAC
CATTTCACAACAAAGTTCTGCAATTGAAAAGTAAGCCATACTTTTCAGGA
TACAAGTAAACTAAGTAATTAAATTGACAAAACAATTAGTATTAATATTA
ACAGGAAATCTGACAAGAAAGATTCACAAACTGGGAGCAAATTGGGTGCT
CTACCACGGCCAAGCACACTTCCTTCAGAGCAAACAAATAGTGGCTCAGT
TGGGATAAGAAGTCAAAAGAGCTCTAGCAATCTGATAAGTAAACGGTCAG
GCTTCACACTATGTTTTAACATTCCATTACAACCAATTAACATACAGGCG
TTCTAAGTGGTTTCATGACATATACCACAGGGGAAGCTTAAATACTGTTG
ACACCAGGAAAATTTTGAATAATAGATCAAGGCTTCAAGATATGGATGTG
ACCAAAGGATTTCGGACTGGAAGTAAAAGTGAGGACCTCGATAAATTCAG
GTCATGGTTTTATACTTGGAATTCTCTCTTCAGCTGCATTTCAAATAGAT
ACTTATCCACCAAACTTATGCAATTAAGATACAAAACTTATATTGGAATA
AATGCCAGTAAGAGGTGGCATAATTTCAATATCAAGCAAATTAGCCAGTT
TTAATGAACAATACTAATATTGAATTCTCAACAGGAAGCTTGACAACCAA
GTTGCAAAAACTGGAAGAATATTACCAGTTCTTCCAAAGGCAACTTCGAG
AGAGCAAATTGAAGGCTGCTCAGTTCAGATTAGAAGTCAGGGAATCCCTA
AAGATCTCACCACCAATGGGTAAGTTTCTGTACAATGTATCGTGCATATT
CATTCCAGCCCTTTTACTCTTACTGCTTAACTATACAATATGGTCAGAAA
AACTTTTTGTATTATAACTAAAGGTTCTGAGTTCTGACTGGTTTTGCATG
GCAGGGAAGGATACATTTCAGATAACAGCAGAACTTTAAAGGGCATGCCA
AGGCTACATGACAAGGATGCTGCAAAAGGGGAACCTGCATCATCTGGAAG
TGGAAAGAATGTAAAGGACCTCAATACTATCAGGTGAAGTATCTACACTT
GGTTTAACTCTTTTTTAAGTTATTTATTAATTTGTCCAATCATGTTACAT
AAGTAAGTTGGAACAAGTCCTGGACATCACTTAATCTAGATATTGATTTG
GAAAACTATCTCCTTGGATGTAAGATTCTGTTATAGACAGCATTTATCTA
GAAATTCCTTAAACAATGCTTTTATTATGAGCTGAACTCCAACACTTTGC
TAACTTTTGTAGTAAATTATATAATCCAGCACTGTACATTTCTTTTTATA
ACAGCACAAATGTACATCCCATATAAAACTTTGACATTCCATGCTCTGCA
GCTTGCATGTTGAACCTTCCAGTTCAAATGAGCAGGCAAATGCATCTGCT
TTGCTGCTTGGCCAATATCCTAGACTTCCACTTTCAGGCATGCAAGCTCT
CCAGAACAATATCGTTGCTTCTGAAAACCAAAAAGTGCCTGACCTTAAAG
ACGGCTTTAGGACATCTGCTCCTTTTAAGCTAAATAATTTGAGGTAATAT
ATTTAATTTTAGAAATTTCTCAGAATGACCTTGATGAAAATTGAGAAGTT
CAGTGTTGAACTCTTTCGTGACAACCTACTGAAACAGGACTACAGAAAAA
GTTCAATCCCCATCAAACTCAACACTGCAGAAGGATCCTAGATTGGTGAC
CAACTCAAGACAAGGTGTAGACTTGAAAGAAAACACAGGATCTAGAATGG
GGCATACTGCAGACACAAGGAAAAAAGCATCATCTAGCCCAACGCTAAAG
AGGAAAGAGATTGAGGTACTTGCATTACATCAGTCCCCACTCCAGATTCT
CACATCTGAAAAAAATTGAAAAGAAGACGGAAGGATATCATAACTCTGGA
AAAAATTCCGTATAGCAACAGCAAAAGTTTGCGTTATTTAATAATCAAGC
AAAGAGTTACTGTATATTTTATTCGAAAATAATATCTTTCAGCTCTAATA
TACTAATTTTTCCTTATGCTAATGCATCCTAACATGCAGGATTCTAGTGC
AAGTTTACCTATGTTGAAACCAACAAAACGTCTGTTGAAATCACCTAGCG
GAAGCAGGTTCCAGTATATGATCACTTGTTTTGTCATTTAAAGAACTTGT
ATTTCATAATGTCCTGACTTTAATTGTACATTCTATTTATTTCTCTATGC
AGCGATGTTAAAGAATTGTTGGAAAATTTTGTTGACAGGGAGCATAATTG
TGATGGAAACACAGAGAATGGTCTTAGTAAATCCCTGAGTTCGTTTCTAC
ATTTCCCTCAGGAAGTACACATGAATGAACTAGAAACCATTCTAGAAATA
GACAATGACACCAATGTCGAGATAGCCCAAGCATGTGCAAAGGAGCTTGA
TGATGTAAGCACAAGTTATCTTTACACTTTCCCGTTCTTCAGTTTTCAAT
ATTTAACCAATTTTAACCAAGGCAGGATCCCGCAAGGCAGTAAGATCTTA
GTTATGTTTGCACTCTGAGAAAAATTTTGTTAATAAAATATACATAATTC
TGAAGCAACCAACCTTATGACATGCCTTTTAAGTTGCACCAACAGTCAAC
ACTAGCTTGCATGTACCATAGGTTTTCCTGCATTAAAAAAATATAGACAA
TTTTCAAATCTAAATTCAGAACGAGTTCCAAGGGCCAAGGAGCATTATAA
CTTTCTGTTGTCTTAGTGTGCGCTGCTATGCGAATATACATGTGATGACC
TGAATCGTGCAAGTTTTAGTTCTGTGTATATAGACCATACCATATAAACC
TCAGACATAAATTTCATGGTGCCGCTTTTTTGGATTTTACAAATTTAATC
TTGATAGGATCTTCTGCCCCCATTTTAGTCAATGATGATACCCAACTTAG
AAGTTAAAATCCCTATTGTGCTAGCAACAATTGTTACTCATCCATGTACC
TTTATTGTGAGTTTTTCGTGTTGTTACTAGGCATCATTCACTATTTTTTT
TTTTTGAAATTTCTAGAAAGGAATACAAAATTAGAACCTAAAAATTGATA
GTAAGAATGTTATTGTTTCCACAGTTGGCCAATATGCTGAAAAAGAAACA
CGAGGAAGCGAAGGAGATTTTGGTTCGAGCTGTTGTCAACAATAATAAAC
TGCTGATGCTGAACCACCCCATAGCTATCCATGAGAAAAAGATATCCTAT
CAAGTCTTAACCATTTCATTATATGTGTGTTGCTAA

Sequence Length

5236

Sequence MD5 Checksum

b65114e55fb7a4bec8cbb7db1da96975

Relationship

The mRNA DCAR_004024 is a part of Gene DCAR_004024
The Genetic Marker MK016710 SSR0273 is located in Gene DCAR_004024
The Genetic Marker MK016692 SSR0082 is located in Gene DCAR_004024

Database Reference Annotations

GFF_source:.

Publication

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Analysis

Is Analysis

False

Is Obsolete

False