DCAR_000250 | CarrotOmics Tripal4

Cds

>DCAR_000250cds ATGCAGGTTATATTTGAGCTGACAACTAACTCATTCCTACTCACAACTGA GGCTGAAGCTAAACTTGATGTGCAGCGAAAGTTTGAGCGCGTGCCAAAGT TCCGCAAACTGTATCCTAATTTAGATGTTTGGTCACCTCTGATTCAAATG TACCTGAATCTGCTGAAGCATGATGAAGACCAAAATATTTTTATAGCCAG CAAGGCCTGCGTTTGTCTTTTGGCTAGGATTGTTAAGGATGATGTCCTTG AACCCGTGATAAATTTTATCGAAGGAAATTTTTCGAATTCTGATTGGCAG TCTCGTAAAGCTGTAGCCCATGCCTATTGCTTAATTCTTGAAGGGCCCAG TATCGAGAAACTTTTGGGAGTAGTAAAACCAACATTATATATTCTACTTC TTCTAATGAAAGATGAAATCGATCATGTAAAGTACACAACTGCATGTACT CTCAGTCGTATGTTTGAGTTATTGCATTCTCCTGGATATTCTCTTATACC TCTCAAAAATTTTGGATTTTCAAAAAGAGTTGTCGTCATTCTGTTGGAAA GCTTAGAATGTGCTCCTTGTATATCCAAAGAGATATGTAGATCTATATGT GCCATTGCTCGTACAAGTGCATTTCTGTTGTCTTCTGATCTTCCCAATAT TGTAAAATCTCTTGTACAAACTGCAGGTAGAAGAGATGGTGACTCTGAAC TCCGTGTTGTTGCATATGAGACCTTGAGGGTGGTGATTGGATATTCTGCT GAAAAAGATTTCTGTGAAATAAAAGATCTGCCTGCTGTTATGTTCGAGTT GTTAGAGACAGCTGTGCTTAAAACTGGATCATCAGATGATAGGGAAATAC AAGAACATTTGCAAGCTTCAGATTTACAAGCTTCGTTTTTTGGAGTCCTT CAAGTAATTATTCGGAGGATGGGTGATGTTGATAACATGGAGCCTGTCAT TCTCCAAGTTGGTGATAAGGTAATATCATTGTTCTTTGGTTCCCAATGCA GTGGACGTAAAGTACAAAAAGAAGAAATGCTTGTTATAGGCGCTCTAGCT TGTGCAGCTAAAACAGAGTTTGTGAAATATATGCCAGACTTGTACCCGTA TGTGTTAATGGGGCTGCAGAATGTAGAGGAATATCAGGCATGTTCCACCT CAGTTGGTGTTGTTGGGCAAATTTGTGTTGCTTTGCGTAAAGAGTTTCTA CCGTACTGTTCTTGTATCATGATCCGTTTGAAGGATCTCACTAGCAGTGA AGTAAAGAAGTCAGTAACACCTATTGTTTTCTTGTGCTATGGGAATATAG CTAAATCGATTGGAGAACACTTTAAGAATTACTATCAGGATGTGGTAAAA ATAATGCAGGATGCTTCAGATCTGCATGTCTATTCGGACAACAGTGATGA CATGGTTGAATATGGGGATCGGCTGAGGCAGAGCATATTTGAGGCTTTTA CTTGTATATTAATAGGACTCGGTGATTCCAATGCTGATTTATTGTTGCCT TATGTTCCTTACATGCTGCAGTTAATACAAAAACACAAACCAAGGGATAA GGGACGTATGAGAACAGCCGTCAAATTGCTGAAGGAACTAGCTGTTTGTT CAAAAATTAAGGGATCACTGAAGGTGCATTCTGATATATTATTAACAGAG CTTCAACAATCGGACAATGAGGAGCTGAGGCAGACTGCAGCTTGGACACA ACAGGAGCTTGGTGGAACTCACTGA

Locus_tag

DCAR_000250

Name

DCAR_000250

Organism

Daucus carota subsp. sativus

Pep

>DCAR_000250pep MQVIFELTTNSFLLTTEAEAKLDVQRKFERVPKFRKLYPNLDVWSPLIQM YLNLLKHDEDQNIFIASKACVCLLARIVKDDVLEPVINFIEGNFSNSDWQ SRKAVAHAYCLILEGPSIEKLLGVVKPTLYILLLLMKDEIDHVKYTTACT LSRMFELLHSPGYSLIPLKNFGFSKRVVVILLESLECAPCISKEICRSIC AIARTSAFLLSSDLPNIVKSLVQTAGRRDGDSELRVVAYETLRVVIGYSA EKDFCEIKDLPAVMFELLETAVLKTGSSDDREIQEHLQASDLQASFFGVL QVIIRRMGDVDNMEPVILQVGDKVISLFFGSQCSGRKVQKEEMLVIGALA CAAKTEFVKYMPDLYPYVLMGLQNVEEYQACSTSVGVVGQICVALRKEFL PYCSCIMIRLKDLTSSEVKKSVTPIVFLCYGNIAKSIGEHFKNYYQDVVK IMQDASDLHVYSDNSDDMVEYGDRLRQSIFEAFTCILIGLGDSNADLLLP YVPYMLQLIQKHKPRDKGRMRTAVKLLKELAVCSKIKGSLKVHSDILLTE LQQSDNEELRQTAAWTQQELGGTH*

Sequence Coordinates

DCARv2_C10706943:55..1876+

Type

gene

Unique Name

DCAR_000250.gene

Sequence Residues

ATGCAGGTTATATTTGAGCTGACAACTAACTCATTCCTACTCACAACTGA
GGCTGAAGCTAAACTTGATGTGCAGCGAAAGTTTGAGCGCGTGCCAAAGT
TCCGCAAACTGTATCCTAATTTAGATGTTTGGTCACCTCTGATTCAAATG
TACCTGAATCTGCTGAAGCATGATGAAGACCAAAATATTTTTATAGCCAG
CAAGGCCTGCGTTTGTCTTTTGGCTAGGATTGTTAAGGATGATGTCCTTG
AACCCGTGATAAATTTTATCGAAGGAAATTTTTCGAATTCTGATTGGCAG
TCTCGTAAAGCTGTAGCCCATGCCTATTGCTTAATTCTTGAAGGGCCCAG
TATCGAGAAACTTTTGGGAGTAGTAAAACCAACATTATATATTCTACTTC
TTCTAATGAAAGATGAAATCGATCATGTAAAGTACACAACTGCATGTACT
CTCAGTCGTATGTTTGAGTTATTGCATTCTCCTGGATATTCTCTTATACC
TCTCAAAAATTTTGGATTTTCAAAAAGAGTTGTCGTCATTCTGTTGGAAA
GCTTAGAATGTGCTCCTTGTATATCCAAAGAGATATGTAGATCTATATGT
GCCATTGCTCGTACAAGTGCATTTCTGTTGTCTTCTGATCTTCCCAATAT
TGTAAAATCTCTTGTACAAACTGCAGGTAGAAGAGATGGTGACTCTGAAC
TCCGTGTTGTTGCATATGAGACCTTGAGGGTGGTGATTGGATATTCTGCT
GAAAAAGATTTCTGTGAAATAAAAGATCTGCCTGCTGTTATGTTCGAGTT
GTTAGAGACAGCTGTGCTTAAAACTGGATCATCAGATGATAGGGAAATAC
AAGAACATTTGCAAGCTTCAGATTTACAAGCTTCGTTTTTTGGAGTCCTT
CAAGTAATTATTCGGAGGATGGGTGATGTTGATAACATGGAGCCTGTCAT
TCTCCAAGTTGGTGATAAGGTAATATCATTGTTCTTTGGTTCCCAATGCA
GTGGACGTAAAGTACAAAAAGAAGAAATGCTTGTTATAGGCGCTCTAGCT
TGTGCAGCTAAAACAGAGTTTGTGAAATATATGCCAGACTTGTACCCGTA
TGTGTTAATGGGGCTGCAGAATGTAGAGGAATATCAGGCATGTTCCACCT
CAGTTGGTGTTGTTGGGCAAATTTGTGTTGCTTTGCGTAAAGAGTTTCTA
CCGTACTGTTCTTGTATCATGATCCGTTTGAAGGATCTCACTAGCAGTGA
AGTAAAGAAGTCAGTAACACCTATTGTTTTCTTGTGCTATGGGAATATAG
CTAAATCGATTGGAGAACACTTTAAGAATTACTATCAGGATGTGGTAAAA
ATAATGCAGGATGCTTCAGATCTGCATGTCTATTCGGACAACAGTGATGA
CATGGTTGAATATGGGGATCGGCTGAGGCAGAGCATATTTGAGGCTTTTA
CTTGTATATTAATAGGACTCGGTGATTCCAATGCTGATTTATTGTTGCCT
TATGTTCCTTACATGCTGCAGTTAATACAAAAACACAAACCAAGGTAAAA
GTTTTTGTTAGTAATTTTTATGCAATTTCTTGTTTACTTCTTATAGCTCA
CTTGCGGACAACCTTGCTTAATTACAATGTTCATTTGCAGGGATAAGGGA
CGTATGAGAACAGCCGTCAAATTGCTGAAGGAACTAGCTGTTTGTTCAAA
AATTAAGGGATCACTGAAGGTGCATTCTGATATATTATTAACAGAGCTTC
AACAATCGGACAATGAGGAGCTGAGGCAGACTGCAGCTTGGACACAACAG
GAGCTTGGTGGAACTCACTGA

Sequence Length

1821

Sequence MD5 Checksum

77cff5a2130d2585f27289f9d719c066

Relationship

The mRNA DCAR_000250 is a part of Gene DCAR_000250

Database Reference Annotations

GFF_source:.

Publication

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Analysis

Is Analysis

False

Is Obsolete

False