DCAR_025687 | CarrotOmics Tripal4

Cds

>DCAR_025687cds ATGCCCCCAGAAACAAGTGATCATCGACGATCAACAAAGCCACAGCAACT GGGTGGCGCGCCACCTCCCGAACCAGAACACCTCCCCTGTCCCCGCTGTG ACTCCACCAACACCAAGTTCTGCTACTACAACAACTACAACTTCTCTCAG CCTCGTCACTTCTGCAAAGCCTGTAGGCGTTACTGGACTCACGGTGGCAC TCTCCGCGACATCCCTGTCGGCGGCGGTAGCCGCAAGAATGCCAAGCGTT CCCGGCCTTCTTCTTCCATTTTCGCCACTTCTGGCCAGGACTACCGCCAC CTCCCCGCCGCCGCCACCCCCATTTTCCTCCCCCTCTCCGGCGGTGATCA TGGTGGGTCCCTCCCTTTTATGAGCGACGTTAAGCAGGGTTATAACATGT GTGGCAGCTTCACTTCGCTATTGAATCAAGGGCCTGGGCTTTTGAGTCTT GGTGGGTTTGGGCTTGGGATCGGCCATCATGGGTTTGAAGATATGGGCTT TGGGCTTGGAAGAGCCTCTGTCTGGCCGTTTGCTGGCGTCGGAGACGGTG GCGATAACGGCGGAGGTGGCGGCGGACATGTGATGGGGAACACGTGGCAG CTTGAGAGTGGCGAAAGTGGGTTTGGGAGTGGAGATTGTTTTACTTTGCC GGATCTTGCTATTTCAACCCCAGGAAATGCAATGAAGTGA

Locus_tag

DCAR_025687

Name

DCAR_025687

Organism

Daucus carota subsp. sativus

Pep

>DCAR_025687pep MPPETSDHRRSTKPQQLGGAPPPEPEHLPCPRCDSTNTKFCYYNNYNFSQ PRHFCKACRRYWTHGGTLRDIPVGGGSRKNAKRSRPSSSIFATSGQDYRH LPAAATPIFLPLSGGDHGGSLPFMSDVKQGYNMCGSFTSLLNQGPGLLSL GGFGLGIGHHGFEDMGFGLGRASVWPFAGVGDGGDNGGGGGGHVMGNTWQ LESGESGFGSGDCFTLPDLAISTPGNAMK*

Sequence Coordinates

DCARv2_Chr7:29711559..29714991+

Type

gene

Unique Name

DCAR_025687.gene

Sequence Residues

CAGAAAATGTAAGTGTTTATATATATGGTAAAAAAAAGAAAGAGGACATG
AAAATGTTGTTGTGCCATGGACATGATAAAGAAACGACGACTACCACCTC
TTAGCAGAGCTGCTAGGGTGGTTCAGAAGACTGACCGCGCGTGCCAGTCA
GTATTCTTGCTATTGTCCGACCACTTGGGCATCTGTCATTTTCTTGAATA
AGTGTCGCTCTAGTCTTGCCATTTCTTCTTTATAATTTGTTGTCAAATCA
CATTGTTTAGTTACTTCTCCATCAGTATTATTATCCTGACGAAATCAGAA
TTTCAAACTCAAACTCAAATTGAATAACTAAATTCACCTCGAGTTTCTAA
AATTTGATTATAACCTAAAATTTAGTAAACTCTTCATTTTTTTTATACTT
CTCTCATTTGATATGTCGGAACTGTTAATGACATGAGATAAATTACTAAT
TTACGTCCAATCTATAAGATTAAATATATTCATGAGTGATCTTGTTGAAT
TCGTATTTACGGTATTTTAATACAGTGAAATTTTTATATTTAAAATTAAT
TAATATGAAATTAAAGATATTAACGATCAAAAATATGTGTTGGCAAGCGT
GATAAAAAGAAACATGAAAAATATTATGGGACGAAGGGAGTAGTCTTTTA
CTAATTTTCGAGTCGGTTTGAGATTTATTACACACGTAGATTCTTAATTT
TGTAGCTCGAAGGCAAACATTACATTCCACCGAAAATATTATAGTAAAAT
GAAGAAGGCATGAAAAAGAAGAGGTGCAGCGAAAAGTCAGGCAAGAAAAA
CAGGGAGCATAGTACGGAGGAAGTGTGAAGTAGAAAAAGAGAAAGAAATA
GAACGGATGGGATGTGATGGGGGGCGGTGGAGAATCTTGGAAACAAGGAA
AACGACGGATCCGTAATCAGGGGAGAGGCGAGAGTAGCAATCCAATAATT
GCACCCCCACGCTAACCCGACACTTCTCATCATTCTGTCTCTGTACCCCT
CACTCTCACTCTCTTACACTCCGGTTTTTACCTATCAGTCCCTCCTCACG
TTCATTATTTGCCAGCCCTGCGTGTAGTTTGTGTTGAGTTGTTAATCTAA
GGGATGTTTGACAGAAGCATAAGCTGACTGAAGTTGTTTCTGGCTTCTAC
TTCTCCTAATTCGTTTGTGTAAATGAGTATAATCACTTTTAAGTCGAGAA
TACTAATCTTTGGTTTAATCAAAAAATCACTTTTTTTAAATTAACCCAAA
CGGCTCCTAAATATCTAAGTCAAGATCATAAATGAAGTTCGATAAGCTCG
GTTTGATATTTAAATAAACATAACTACAAAAATCAATAAGACGGTCTGAT
GAATTTACTTGCAAAAATTAATATGGGTCTGGTGTCAAATTCAAATGCGA
ATTCCATGGCAAAAATAATTCATGCAGTACATATTTATGTACCTGCAGCA
TCGTCTTGATGAGCTCAACAGCCTTTTTTATAAACAATTCTTGTATTTAC
TAGAGTCAAAACTGTATAATTGCACTACACAGTAAGGACACAAAATGTTT
ATGAAACATGAATTCTAACTTAATTATGCTTTCCTTGCCACAGTTGCCAC
TTGCCAGGCCGTATTTATATATGGGTCCTTGTGGACCAGCTTATATCCTG
AATCTCTAGCATAATTACCCAATGTAATTATGCAGTCCTCGTTGATGATT
AGTAGTCATTCATAGTAATTATTTGTTTAATTAAGTGCGCACACGTGTTA
TTGACAATCATGCCTCGTTACCAATAATATCATCGATGGCTCTTCCACTC
GGATTTAAATAAACTTATTTCTCGAAAGTTAGGCCAAGATGCAAACAAAT
TTATAAACTTTAGTTTCTACTTTCCCACGGTGTATATAATATACGCTTTT
GCACTCTTTAATCTATCACCATTTACTGCTTTTGTACTCTTGATCATACT
GTTTCTCTATTGAATTACTACTTGCATGCATAACTTAACAGGATTATACT
GTATTTGGTTCTACTCCGTGTCATGTGTACGCTCATATCTTTCACTATTT
CACATTTCACCTCTCGTCTCAAAATAAGGGTTTATTATCTGTAAATATAT
GTTTGAGAATTGTGAGAAACCGAAAAATGACCGTAAAATATCCATCTCGT
ACCTCATCGATGAGGTAGTTTTGTTAAATTGTAAAAAAATGTTAGTATAA
AATATATACCGATGCTTATGTATTGTATCAAGGTGAAAGATGTATACGTT
TCATATGCAGGGATATAATTATACAAAACCAATACGTACGTACGCATGCA
TGCATGTATCTAATGAGAGAAGAGGGCTAGGCAGCAAAGGCTGTGTCGAC
CCCTAGCCGACTGAAAAATGTGTCTCTATTTACAGAAACTACATTTTTAA
AGCTGCCTGCTCCTACTAATTTGCTTTTTGTAAGTAACCCTCACACCCCC
TCTTTTATGCTTATGCTTCTGCTTGCTTCCTTCTCTACAAGACAGAATCT
CTCTTTATCTCCCTCCCTCTCTCTCTCTCTCTGAGCCCCCTCCATAAAAT
CCCCTCTACCATCCAAAAAGCAACACTGCCCCCCACACTCCACACTTCCA
TTCCTCACAGAACATTCATCAAACACTTGCAGCAATGCCCCCAGAAACAA
GTGATCATCGACGATCAACAAAGCCACAGCAACTGGGTGGCGCGCCACCT
CCCGAACCAGAACACCTCCCCTGTCCCCGCTGTGACTCCACCAACACCAA
GTTCTGCTACTACAACAACTACAACTTCTCTCAGCCTCGTCACTTCTGCA
AAGCCTGTAGGCGTTACTGGACTCACGGTGGCACTCTCCGCGACATCCCT
GTCGGCGGCGGTAGCCGCAAGAATGCCAAGCGTTCCCGGCCTTCTTCTTC
CATTTTCGCCACTTCTGGCCAGGACTACCGCCACCTCCCCGCCGCCGCCA
CCCCCATTTTCCTCCCCCTCTCCGGCGGTGATCATGGTGGGTCCCTCCCT
TTTATGAGCGACGTTAAGCAGGGTTATAACATGTGTGGCAGCTTCACTTC
GCTATTGAATCAAGGGCCTGGGCTTTTGAGTCTTGGTGGGTTTGGGCTTG
GGATCGGCCATCATGGGTTTGAAGATATGGGCTTTGGGCTTGGAAGAGCC
TCTGTCTGGCCGTTTGCTGGCGTCGGAGACGGTGGCGATAACGGCGGAGG
TGGCGGCGGACATGTGATGGGGAACACGTGGCAGCTTGAGAGTGGCGAAA
GTGGGTTTGGGAGTGGAGATTGTTTTACTTTGCCGGATCTTGCTATTTCA
ACCCCAGGAAATGCAATGAAGTGATTATTATGTTTGTTATTACAATGTGT
TTTTAATCAGTGTCGTGTAATGGTTCAATCATATCAGGTTATGTGGTTTA
AGCCAGGCAGCCTCATGTATTAGCAACCCAAG

Sequence Length

3432

Sequence MD5 Checksum

22a096c04270e52f65c51ff59f84717c

Relationship

The mRNA DCAR_025687 is a part of Gene DCAR_025687
The Genetic Marker MK002156 ESSR-051 is located in Gene DCAR_025687

Database Reference Annotations

GFF_source:.

Publication

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Analysis

Is Analysis

False

Is Obsolete

False