DCAR_021050 | CarrotOmics Tripal4

Cds

>DCAR_021050cds ATGGTTGTCATGTCTAAGCAATCTCCAAAGATTGAACAGTTTTGTGTAGT GAATTCTAAGCAGTCTGCCAACACATTGATTCCCCTCATTGACCTCTCTC AGCCTGACTCAAAATCATGTCTTGTTAAGGCCTGCGAAGAATTCGGCATT TTTAAAGTCATCAACCATGGCATTCCTACTCAATTTATATCCAAACTTGA ATCGAAAGCAATTGAGTTTTTTTCTTCACCCATGTCTGAGAAAGAGAAGG CAGGGCCTCCTGACCCTGTTGGCTATGGAAATAAAAGCATTGGCCCGAAT GGCGACGTGGGATGGGTTGAATACCTTCTCTTGTCCACAAATTCTGAGAA TGATTGTCAAAGAATTGCATCAGTTGTTGGTGAAACCCCTGAAAACTTTA GTTTGTGTGTGAATAATTATGTAAAAGAGGTGAAAAAGATGGCCTGTGAC ATCCTTGAAATGCTGGCAGACGGGCTAATGATTCAGCAAAAAAATGTTTT TAGTGAACTCTTGATGGATAAGCAGAGTGACTCTGTTTTTAGGCTGAATC ACTATCCACCATGTCCAATGCATAATGGTAAAAATTTGATTGGTTTCGGA GAACACACTGATCCACAAATCATATCAATTTTGAGATCCAATAACACATC AGGCCTTCAGATATCATTGGAAGAAGGCTCTTGGATTTCAGTTCCAGCAG ACCAAGACTCATTTTTCATCAATGTCGGTGACTCCTTGCAGGTGATGACC AATGGGAGATTTAAAAGTGTGCGGCACAGGGTTCTGGCAAACAGTCATAA ATCAAGAGTATCAATGATATATTTTGGAGGACCACCGTTGAGTGAGAAGA TTGCCCCATTGCCTTCACTGCTCAAGCAAGGAAATAGCAACAGTTTGTAC AAGGAGTTCACTTGGTTTGAGTACAAAAAATCTGCATACAAGTCGAAGCT TGCTGACAACAGATTATGCTTATTTGAGAAAATCATAGCCTAA

Locus_tag

DCAR_021050

Name

DCAR_021050

Organism

Daucus carota subsp. sativus

Pep

>DCAR_021050pep MVVMSKQSPKIEQFCVVNSKQSANTLIPLIDLSQPDSKSCLVKACEEFGI FKVINHGIPTQFISKLESKAIEFFSSPMSEKEKAGPPDPVGYGNKSIGPN GDVGWVEYLLLSTNSENDCQRIASVVGETPENFSLCVNNYVKEVKKMACD ILEMLADGLMIQQKNVFSELLMDKQSDSVFRLNHYPPCPMHNGKNLIGFG EHTDPQIISILRSNNTSGLQISLEEGSWISVPADQDSFFINVGDSLQVMT NGRFKSVRHRVLANSHKSRVSMIYFGGPPLSEKIAPLPSLLKQGNSNSLY KEFTWFEYKKSAYKSKLADNRLCLFEKIIA*

Sequence Coordinates

DCARv2_Chr6:26235684..26237575-

Type

gene

Unique Name

DCAR_021050.gene

Sequence Residues

CTGTAAAAAGATAGCTGTATGAAGCGAGTATAAATAAGATCATTTTATAT
ACTTCAGCATATCTCAAACAAAGGGCACAGACCACCTTACCTTGTTGCAC
CAAAATCTCTTTCCCATCTCACATCTATAAATAGGCAAGCAAAACCACCA
TACCCTTCACCTATCTCTGCACAACCAAACATAGTACAGCATTTTCGTAT
CTTCACCTATTTCTTTACTAAACCAGTACTTATACAAGTCATCATTCCAC
ACCATTACATTCTTAAATCTTTACATTCTCTCATTCAAAACTATGGTTGT
CATGTCTAAGCAATCTCCAAAGATTGAACAGTTTTGTGTAGTGAATTCTA
AGCAGTCTGCCAACACATTGATTCCCCTCATTGACCTCTCTCAGCCTGAC
TCAAAATCATGTCTTGTTAAGGCCTGCGAAGAATTCGGCATTTTTAAAGT
CATCAACCATGGCATTCCTACTCAATTTATATCCAAACTTGAATCGAAAG
CAATTGAGTTTTTTTCTTCACCCATGTCTGAGAAAGAGAAGGCAGGGCCT
CCTGACCCTGTTGGCTATGGAAATAAAAGCATTGGCCCGAATGGCGACGT
GGGATGGGTTGAATACCTTCTCTTGTCCACAAATTCTGAGAATGATTGTC
AAAGAATTGCATCAGTTGTTGGTGAAACCCCTGAAAACTTTAGGTAACAA
AGACTGAAAAACCTTTTCATGGCAGTCATAAAATTTAGTTTTATTTACTA
ACCGGAGCTTTCTCGATGTTATTGCAGTTTGTGTGTGAATAATTATGTAA
AAGAGGTGAAAAAGATGGCCTGTGACATCCTTGAAATGCTGGCAGACGGG
CTAATGATTCAGCAAAAAAATGTTTTTAGTGAACTCTTGATGGATAAGCA
GAGTGACTCTGTTTTTAGGCTGAATCACTATCCACCATGTCCAATGCATA
ATGGTAAAAATTTGATTGGTTTCGGAGAACACACTGATCCACAAATCATA
TCAATTTTGAGATCCAATAACACATCAGGCCTTCAGATATCATTGGAAGA
AGGCTCTTGGATTTCAGTTCCAGCAGACCAAGACTCATTTTTCATCAATG
TCGGTGACTCCTTGCAGGTAAAATATAAAGGAAACCCTACCACAATAGTG
AATTTCAGTTCTATATAGTTGATGCCAAGTTTGTGGGCTTCTTGCTTTGA
TACAATAATATCTTGCAGTTTCTACAATCTTCGAAATAAATACTTTAATG
AATTCAACTTTATCTGTATATCTAGTAGCATCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCTGTGTGTGTGTGTGTGAT
GGACCACAGGTTGTTATAAAATGATTGAGAAGGTGAGTCATGTGAATCTC
TGTGGATTCTTGAAATATATCTATTTAAAGTATCAACTTGATATTGAGGG
GCATGCTATATAGGGTTCTGTCTGCATGGTAATTTTTAAAAATATGTACT
GTGGTACGAGTGCATTTAAGCAGCCATATAGTCTTTGTTTTTGGGAAAAG
GACATATCCTTGTTATTCATTACAGTCTGTTTGATGGGGTTTTCTTATAA
ATTGACTGTACAGGTGATGACCAATGGGAGATTTAAAAGTGTGCGGCACA
GGGTTCTGGCAAACAGTCATAAATCAAGAGTATCAATGATATATTTTGGA
GGACCACCGTTGAGTGAGAAGATTGCCCCATTGCCTTCACTGCTCAAGCA
AGGAAATAGCAACAGTTTGTACAAGGAGTTCACTTGGTTTGAGTACAAAA
AATCTGCATACAAGTCGAAGCTTGCTGACAACAGATTATGCTTATTTGAG
AAAATCATAGCCTAATTGAAATACTTAAAGTTTCTTCCTGC

Sequence Length

1891

Sequence MD5 Checksum

801ca12d80299fe28c2ad3093c45e856

Relationship

The mRNA DCAR_021050 is a part of Gene DCAR_021050
The Genetic Marker MK016703 SSR0192 is located in Gene DCAR_021050

Database Reference Annotations

GFF_source:.

Publication

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Analysis

Is Analysis

False

Is Obsolete

False