DCAR_021742 | CarrotOmics Tripal4

Cds

>DCAR_021742cds ATGTCTTCTACCACACCCCCTCTCATTCAAACCTCACGTTTTTCAATCCC ACCAAAATGTTCTTGCATTTCCACACTCAAGCCTTCATCATTTCTGTCTC TACCAGCTAAGCCCATCTCACTTCTCCACTCATCTTCTTCTCTATGGCTT TCCCACAAGCCCTCCAAGATTCTACGTCCAATTCTTGTTGCAGAGGCTTC AGAGTATGGCCAGGAGGAAGGGGGAGAGGAGGGGGGTGTTTCTTCGGTGA GTACTATTGAACCTGAAGCTTCGGTTGAGGAGGCTAGCCAAGAAGCTGTG GAGGAGGTTGTTGAAACACAAGAAGAAGAAGTAGTTGTTGCAGAAGCAGA AGAAGTAGTTTTTGCAGAAGAAGAAGTTGTTGTTGAAGAAGAAGGAGAAG AAGTTGTTGAAGAAGAAGAATCCTACTCTGAACCGCCTGAGGAGGCCAAG CTCTTTGTGGGAAACTTGCCTTATGATTATGACAGTGCTAGACTGGCTGA GCTTTTTAATAAGGCGGGTGTGGTTGAGATTGCAGAGGTTATCTACAATA GGCAAACTGATCAAAGTCGAGGATTCGGGTTCGTGACAATGAGTACAGTG GAAGAAGCAGAGAAGGGGGTAGAGATGTTCAGCCGTTATGATCTAGGTGG TCGACTTCTGACTGTGAACAAGGCTGCTCCTAGAGGATCACCACCTCAGA GGGTTTTTGAACCTTCTTTCAGAATATATGTCGGTAACCTGCCGTGGGAA GTGGATAATGGTCGGCTAGAGCAAGTGTTTAGTGAACATGGTAAGGTAAT TGATGCCAGAGTTGTATATGACCGTGAGACTGGGCGTTCTCGTGGTTTTG GATTCGTAACAATGGCTAGTGAGACAGAAGTCAATGATGCCATAGCTGCT CTGGATGGGCAGAGTTTGGGTGGAAGAGCTATTCGGGTGAATGTGGCAGA GGAACGTCCAAGACGCAACTTCTTCTAG

Locus_tag

DCAR_021742

Name

DCAR_021742

Organism

Daucus carota subsp. sativus

Pep

>DCAR_021742pep MSSTTPPLIQTSRFSIPPKCSCISTLKPSSFLSLPAKPISLLHSSSSLWL SHKPSKILRPILVAEASEYGQEEGGEEGGVSSVSTIEPEASVEEASQEAV EEVVETQEEEVVVAEAEEVVFAEEEVVVEEEGEEVVEEEESYSEPPEEAK LFVGNLPYDYDSARLAELFNKAGVVEIAEVIYNRQTDQSRGFGFVTMSTV EEAEKGVEMFSRYDLGGRLLTVNKAAPRGSPPQRVFEPSFRIYVGNLPWE VDNGRLEQVFSEHGKVIDARVVYDRETGRSRGFGFVTMASETEVNDAIAA LDGQSLGGRAIRVNVAEERPRRNFF*

Sequence Coordinates

DCARv2_Chr6:20195835..20198162-

Type

gene

Unique Name

DCAR_021742.gene

Sequence Residues

ATGTCTTCTACCACACCCCCTCTCATTCAAACCTCACGTTTTTCAATCCC
ACCAAAATGTTCTTGCATTTCCACACTCAAGCCTTCATCATTTCTGTCTC
TACCAGCTAAGCCCATCTCACTTCTCCACTCATCTTCTTCTCTATGGCTT
TCCCACAAGCCCTCCAAGATTCTACGTCCAATTCTTGTTGCAGAGGCTTC
AGAGTATGGCCAGGAGGAAGGGGGAGAGGAGGGGGGTGTTTCTTCGGTGA
GTACTATTGAACCTGAAGCTTCGGTTGAGGAGGCTAGCCAAGAAGCTGTG
GAGGAGGTTGTTGAAACACAAGAAGAAGAAGTAGTTGTTGCAGAAGCAGA
AGAAGTAGTTTTTGCAGAAGAAGAAGTTGTTGTTGAAGAAGAAGGAGAAG
AAGTTGTTGAAGAAGAAGAATCCTACTCTGAACCGCCTGAGGAGGCCAAG
CTCTTTGTGGGAAACTTGCCTTATGATTATGACAGTGCTAGACTGGCTGA
GCTTTTTAATAAGGCGGGTGTGGTTGAGATTGCAGAGGTATCGTTTCTGA
ATTTCTTCAATTTTATCCCGAATTTCACTGAATCAATTTCTGTTTGCTCT
AATATTTAGTGAAATTTTATACTATTGAATATATCATATTAGAGGGCATT
TGGAAGGTGCATTTCATTTCGAATGATAGATTTCAAATGACAGGATTTGA
GTTGTTATTTCAAATTCTCAGGTTTATACTATTATTTGAATGTCTTGGAT
TTCAAATGAAATCCAAATCCATATTCCTAAACAAGTTATTTGTTCAAATT
CAGAATTTCAAATAAAATACAAGTTGCCAAACGGACCATGAGAAATAAGG
ATTCAGAATTCGGTTACATATTCTGTTTGTTATTCTTGAGTTGTGTCTCG
GTTGATAATGAATTGAAATCGGGTAATAGCCTAATAGGTCAGACTTTGCC
ACCATAATATATTCCTAGATACTGCATGTAGATGTAAGATTTGAAGATTA
GGCAATGCACATTGTTATGTTGTGGAATGAGAAATTTGATGCCATCTTTG
GCTTGATTTTTGTAGTTATTATTCATACAATGAAACTAATCTATTTCTCT
ATCATTTATGATTGCATACTAAGTTCTGGAAAAATGGGATCCTGCTGATT
GTGGTTTTGTGTTTTAGGTTATCTACAATAGGCAAACTGATCAAAGTCGA
GGATTCGGGTTCGTGACAATGAGTACAGTGGAAGAAGCAGAGAAGGGGGT
AGAGATGTTCAGCCGTTATGTAAGATTCTAATTTTACCCTCAGTTTTTTG
ATGATATTAAGTGTGAAAGATTATAATGGAACATAAAGTTTCACTGTAGA
CTAGTTGGTACAGTGCAATTCTACTCGTATGTTGGGATCCACTTTTTAAT
ATTGCCAAGGAATGTTTTATTTCTTTCTTAGGATTAAAAACATGGATACT
TTGTCTCTCTTCTGATATAATTTTGGCATATGGGAGGTCGAGGTTCATAT
ATTGTCAGAAACAAGATGGTTGTGTGAGTGAGTTCAGTCTTGTGTAAAAA
GAAAAGAATGCTGGTATACAGAAGTTATTGGATTTCTAACTCCTCAATGG
CCTGATCAGACAGTACTGCTTCCTGTAAAAATTCAATAATAATGGAAAAT
TGCATTGAAATTGTGTATTTGTGTATTCATATCGAAATTATAATGTGTGA
CAGGATCTAGGTGGTCGACTTCTGACTGTGAACAAGGCTGCTCCTAGAGG
ATCACCACCTCAGAGGGTTTTTGAACCTTCTTTCAGAATATATGTCGGTA
ACCTGCCGTGGGAAGTGGATAATGGTCGGCTAGAGCAAGTGTTTAGTGAA
CATGGTAAGGTAATTGATGCCAGAGTTGTATATGACCGTGAGACTGGGCG
TTCTCGTGGTTTTGGATTCGTAACAATGGCTAGTGAGACAGAAGTCAATG
ATGCCATAGCTGCTCTGGATGGGCAGGTAAGAGCCCTGGGAATAGTCTAA
TTTTTGTATTTGTTTCCACTTAATTAAAACTCAATATCTATCAACTTTAT
CTTTAAAACATGATTCCATCTTAAAACTGTCTTCAAGTCTTGGTTATTTT
TTTATTGATATAAGAAACATTTGCAATGCAGTTATTCGACTAAAATGCAT
CCCATCATTCTAGCTAGAAAAACAAATAGAAATCCGTAGTCAAACTCCAT
GTAAACCATTGTGTGTCAGTAAACTTAATATATATCTTGACATTGAGACT
TGTGGTTGCAGAGTTTGGGTGGAAGAGCTATTCGGGTGAATGTGGCAGAG
GAACGTCCAAGACGCAACTTCTTCTAG

Sequence Length

2327

Sequence MD5 Checksum

4e965948e239ea18da035e8b7e3c64ca

Relationship

The mRNA DCAR_021742 is a part of Gene DCAR_021742
The Genetic Marker MK002141 ESSR-036 is located in Gene DCAR_021742

Database Reference Annotations

GFF_source:.

Publication

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Analysis

Is Analysis

False

Is Obsolete

False