DCAR_013321 | CarrotOmics Tripal4

Cds

>DCAR_013321cds ATGGCGAAGAAGAATCAAGAAGAGATCGCGAAAGAAACGGCACTGGTTTT GAAAGAGATTAATAATGATAATAAACAAAATCAAGATTCTACAGCAGATG CTGATGCTAATGCTGCTGATCCATCATCACAATCATCTACTTGTGCTGTA TCGAACAATAATGAAGATGAGAATGATCATCATCCATACGCGTTTCATGT TTCGGGGCCTCGCAATGTTTCTTCTCCCAGTTGGAGAGAAATCATCAAAT CTAGCTGGAAGAATGGGAACTACAAAAGGACAGTTATTGCATGTTTCATA CAAGCAGTTTACCTTCTCGAACTTGACAGACAGGAAAATAAGACTGAAGA AAATGCTCTTGCTCCAAAGTGGTGGATACCTTTTAAGTACAAGCTGTCCC AAACCCTAATTGACGAGAGAGATGGATCCATATATGGTGCTATACTAGAA TGGGATCGTTCTGCTGCTTTAGCAGACTTCATCCTTATCAGACCAAGTGG TGCTCCTAGGGCTGTCTTAGTACTACGAGGTACATTACTTAAAAGCCAAA CAATTAGACGTGACATACAAGATGACCTCCGTTTTCTAGCTTGGGAAAGC CTAAAGGGTTCTGTCAGATTCAATGGAGCTCTAGAGGCTCTGAAATTGAT TGCAGATAAGTATGGAGGGGGCAATGTATGTGTTGCTGGCCATTCTTTAG GAGCAGGATTTGCACTACAAGTGGGAAAAGCATTAGCTAAACAAGGTGTC TTTGTGGAGACTCATCTGTTTAATCCACCTTCCGTCTCACTGGCAATGAG CTTGAAGAACATTGGCGAGAAAGCTGGTTTTGCTTGGAAGAGGCTTAAAT CAATGCTTCCATCTAGCAATGAAACCCCCGCTATCAGTGAAGTTGGGCAA AACGCGAGCATTCCTAGTAGTGGACTAAAGAATTGGGTACCTCATTTATA TGTGAACAACAGTGACTATATCTGCTGCTATTACACTGATCCTGCTGGCG GAGGAAACCAGGAAGTAGAAAACAAGGAGAATGCTGGTCCGAAAAATGGA CAAGCTGCGGCAAAGCTTTTTGTGTTATCAAAAGGCAAGCAGAAATTTCT AGAGGCACATGGATTGGAGCAGTGGTGGGGTGATGATTTGGAACTTCAAC AGGCTCTCAGTAACAGCAAGCTCATAAGCAAGCAGCTGAAGTCCTTGTAT ACACTACCAGCAGCTCCTAAACAAACTCAAGCTAAATAG

Locus_tag

DCAR_013321

Name

DCAR_013321

Organism

Daucus carota subsp. sativus

Pep

>DCAR_013321pep MAKKNQEEIAKETALVLKEINNDNKQNQDSTADADANAADPSSQSSTCAV SNNNEDENDHHPYAFHVSGPRNVSSPSWREIIKSSWKNGNYKRTVIACFI QAVYLLELDRQENKTEENALAPKWWIPFKYKLSQTLIDERDGSIYGAILE WDRSAALADFILIRPSGAPRAVLVLRGTLLKSQTIRRDIQDDLRFLAWES LKGSVRFNGALEALKLIADKYGGGNVCVAGHSLGAGFALQVGKALAKQGV FVETHLFNPPSVSLAMSLKNIGEKAGFAWKRLKSMLPSSNETPAISEVGQ NASIPSSGLKNWVPHLYVNNSDYICCYYTDPAGGGNQEVENKENAGPKNG QAAAKLFVLSKGKQKFLEAHGLEQWWGDDLELQQALSNSKLISKQLKSLY TLPAAPKQTQAK*

Sequence Coordinates

DCARv2_Chr4:31056311..31059348+

Type

gene

Unique Name

DCAR_013321.gene

Sequence Residues

ATGGCGAAGAAGAATCAAGAAGAGATCGCGAAAGAAACGGCACTGGTTTT
GAAAGAGATTAATAATGATAATAAACAAAATCAAGATTCTACAGCAGATG
CTGATGCTAATGCTGCTGATCCATCATCACAATCATCTACTTGTGCTGTA
TCGAACAATAATGAAGATGAGAATGATCATCATCCATACGCGTTTCATGT
TTCGGGGCCTCGCAATGTTTCTTCTCCCAGTTGGAGAGAAATCATCAAAT
CTAGCTGGTATCTCTTTTGCTTTTTATTATATGCCCTTTTAATCTCCTTT
AAATTGTTCAATCGTACACCAAATTTCTTAATTTGTTTAGTTGTGTAAGT
ACTAAAATATTACTTGATAGAGACTTGTCAGCCTTTGTTTACCGGTATTT
ACTTGTTTTTGGGTATGTGATTGCTTAGGCTTAGAATCCTGGATTGGAGT
TTTGTACAATATTTGTCTAGCAATTTATCTTGGCTGGTTCATGGTTACAA
TAAAGTCGAAAAAATTTGCAAAGTAAAGCCATCCTTGTTTTCTTAAGAAT
TCATAAGTTCTCGCCTTATTGGTTGGGTAGTCCCATTGACTCCTCTTCAA
GTTGTATAGAGATTAGTTTGTATATTGAATTGGAAGAAAGAGTACGTATA
TTAGCCTCTTATTTGTCTTGGGAGGTTGGGATTTGATAGTTTCACAAATA
ATCTAATAAATCTCTACATTGCCCAATGGTTATTCGTCCAATGGTGGAAG
CTGTTTTTTTCCCTGTAAAATCTTGTAAAATATATGTGCTTAATTGTTTC
GTCCAACAGAGGAAGCTGTTTTGTCTTGGTAAAATCTTGTAAAATATATG
TGCTTAATTGTTCATATTCCCTTTTGTTCGCAACAATACTTGGTTTGATA
AACCATATGATATTGTAGTCAATCAATTGTTTTATTACAAATCTATAACA
TTTCTGACCAGTAAGTTTAAATATGAGCACATACAGCCATTTTTATACCG
AGGTAGAAATAAGTACTGCTGAATTGTTTCTTTGTCTAGATATATATATA
AACACATTAGTGTTACATATGAAATTGCATTGATGTTGTTTAATTTCTCA
TACTTTCCGATGTGATTTTGCAGTTCTTACATTTTCTCGCTCTTTAGGGA
AATAGCTATTGTTTCTCTGTTTGACATGGAAGATTGGAAGTTATATAAGA
GTTGTACAGTTTTTGCTATAGATAGTATAGTCTGACTTTACCCTTGTCCT
CTAACTTATTGACTCCTCTTAAAGTCATATTGGGATTAGCTTTTATTTAA
TTTGGCAAAAATAATCTGTATATTGGCCACTTATTTGTCTTAAGATGTGA
TAGTTGACAGATTAAAAATTCATCTATCTGCATCAGATCTAACTTTAAGG
TCTTTTATAGGATCCATCAGATTTCAGTAGATTGAAATTTTATCTCCTGC
CTGTTGGCTATACAACTGAATAACGGCTTAACAGAGTGAAAGTGATTGAC
GATATATGTAATTTGACATATTGATCAGCTTATATGTTGGACAACTTTAT
TGTAACAACCAAGTTTAAGGTCCAAAAGGAATAATGCATTTATATGGATA
ACGTTTTTGTTGCTTGAAAAAATTATATGAAATAAAGTAGCTGGTCATTG
TCATAAAATATGAATTCTCCAGAGGATTGTCTGAGTTGTGAGCTCCTTGA
GAATGAAAGATCAGCTTACTGGCATTCTTTTTTCTCAATAAAGGTGAAGA
GATATGGTTTGCATGGTAATAAGAATCTATATCAATTGCTTCCAATCACC
CTTGCTTATAGTATAAATCCGTCCCTGAGTATAAGAATATATGTATGATA
TTGGCACAGATAATCCTTGATGCCAACTAATATCTACATGAATGTAGATG
TCTATATATGATGAAAATGTGTTAGGTCAATGCACTCCTCAATCACAATT
TACCTATGTATAATTTGAAGTTTTTTGGAGAGTGAGATTTGTATTTGTCT
ATTTTCCATCCTAAGAAATATCATTCACTTACACTACATTGATTAATTTT
TGCAGGAAGAATGGGAACTACAAAAGGACAGTTATTGCATGTTTCATACA
AGCAGTTTACCTTCTCGAACTTGACAGACAGGAAAATAAGACTGAAGAAA
ATGCTCTTGCTCCAAAGTGGTGGATACCTTTTAAGTACAAGCTGTCCCAA
ACCCTAATTGACGAGAGAGATGGATCCATATATGGTGCTATACTAGAATG
GGATCGTTCTGCTGCTTTAGCAGACTTCATCCTTATCAGACCAAGTGGTG
CTCCTAGGGCTGTCTTAGTACTACGAGGTACATTACTTAAAAGCCAAACA
ATTAGACGTGACATACAAGATGACCTCCGTTTTCTAGCTTGGGAAAGCCT
AAAGGGTTCTGTCAGATTCAATGGAGCTCTAGAGGCTCTGAAATTGATTG
CAGATAAGTATGGAGGGGGCAATGTATGTGTTGCTGGCCATTCTTTAGGA
GCAGGATTTGCACTACAAGTGGGAAAAGCATTAGCTAAACAAGGTGTCTT
TGTGGAGACTCATCTGTTTAATCCACCTTCCGTCTCACTGGCAATGAGCT
TGAAGAACATTGGCGAGAAAGCTGGTTTTGCTTGGAAGAGGCTTAAATCA
ATGCTTCCATCTAGCAATGAAACCCCCGCTATCAGTGAAGTTGGGCAAAA
CGCGAGCATTCCTAGTAGTGGACTAAAGAATTGGGTACCTCATTTATATG
TGAACAACAGTGACTATATCTGCTGCTATTACACTGATCCTGCTGGCGGA
GGAAACCAGGAAGTAGAAAACAAGGAGAATGCTGGTCCGAAAAATGGACA
AGCTGCGGCAAAGCTTTTTGTGTTATCAAAAGGCAAGCAGAAATTTCTAG
AGGCACATGGATTGGAGCAGTGGTGGGGTGATGATTTGGAACTTCAACAG
GCTCTCAGTAACAGCAAGCTCATAAGCAAGCAGCTGAAGTCCTTGTATAC
ACTACCAGCAGCTCCTAAACAAACTCAAGCTAAATAG

Sequence Length

3037

Sequence MD5 Checksum

65f75fa37ab0ad86a7597593b8f9eee8

Relationship

The mRNA DCAR_013321 is a part of Gene DCAR_013321
The Genetic Marker MK001005 GSSR-006 is adjacent to Gene DCAR_013321

Database Reference Annotations

GFF_source:.

Publication

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Analysis

Is Analysis

False

Is Obsolete

False