DCAR_014519 | CarrotOmics Tripal4

Cds

>DCAR_014519cds ATGGCAGCTAGGCTCTCTGTCGGGTTGTTCCGTGTAGGAAAATATGAAAT CCAGGTTCCCAAACAGATGACTGCTGTTAAAACAATTCGGGAACTATCTC CTTCATTTATAGGCCTAAGGCTGGGAAATAAGCGGAAATTGAGCATGTGT TTCGCGGTGGAGGAAAATGAGAGTCCAGTAGCTGCTGCAGAAGCTGAAGA GAGCTCGCGAGAACTTGAGAGAAAAATAATAGAATCCTTCACTGTCGCAG GAGGCAATCGTGCTGAGGAAAGAATGGCGAGGAAGAAAACAGAACGGTTC ACTTACTTGGTCGCGGCTGTCATGTCTAGCTTCGGGATCACATCGATGGC TGTCTTCGCCGTCTACTCAAGGTTCGCTTGGCAAATGGAGGGTGGAGAGG TTCCTCACTCAGAGATGCTTGCCACATTTTCACTTGCTTTCGGGGCTGCA GTTGGCATGGAGTACTGGGCAAGATGGGCGCACAAAGCGCTATGGCACGA TTCGTTGTGGCATATGCACGAGTCACACCATAAACCAAGAGAAGGAGCAT TTGAGCTGAACGATGTTTTCGCTATAATAAACGCGGTTCCAGCCATAGCG CTTCTCGCCTATGGCTTCTTCCACAAAGGCCTCTTTCCTGGCCTTTGTTT CGGTGCTGGACTTGGAATCACGGTGTTCGGGATGGCCTACATGTTTGTCC ACGATGGTCTTGTTCACAAAAGGTTCCCTGTGGGCCCTGTAGCCAATGTG CCCTACTTGAGAAAAGTTGCCGCTGCCCACCAGCTGCACCACATGGAGAA GTTCAACGGAGTGCCGTTCGGGTTGTTTTTGGGACCTCAGGAATTGGAAC AAGTCGGCGGAAATGAAGAGCTGGAGAAAGAGATCAATCGAAGAATCAAA TCCTCTAACTAA

Gene

BCH-2

Locus_tag

DCAR_014519

Name

DCAR_014519

Organism

Daucus carota subsp. sativus

Pep

>DCAR_014519pep MAARLSVGLFRVGKYEIQVPKQMTAVKTIRELSPSFIGLRLGNKRKLSMC FAVEENESPVAAAEAEESSRELERKIIESFTVAGGNRAEERMARKKTERF TYLVAAVMSSFGITSMAVFAVYSRFAWQMEGGEVPHSEMLATFSLAFGAA VGMEYWARWAHKALWHDSLWHMHESHHKPREGAFELNDVFAIINAVPAIA LLAYGFFHKGLFPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPVANV PYLRKVAAAHQLHHMEKFNGVPFGLFLGPQELEQVGGNEELEKEINRRIK SSN*

Sequence Coordinates

DCARv2_Chr4:21219024..21221147+

Type

gene

Unique Name

DCAR_014519.gene

Sequence Residues

GGGGAAATTAACGAGTTTTTAGCATCTACCCCTGTTTGGATGAGGAGTCC
AAGTGCATTGATACAAAGTTGACAATCTAGTCCACATATAACACATGTGG
CTCACCTCCTTTTATACCCCCCAACACTCACATGTTACCTCCCCTGCCTT
CTTGCATCTCTCCCAACACACTCTCTATTGATATCAATTTTCTAGCTCAC
CTCTCGGTAATCCTCCTGGTAATCCATGGCAGCTAGGCTCTCTGTCGGGT
TGTTCCGTGTAGGAAAATATGAAATCCAGGTTCCCAAACAGATGACTGCT
GTTAAAACAATTCGGGAACTATCTCCTTCATTTATAGGCCTAAGGCTGGG
AAATAAGCGGAAATTGAGCATGTGTTTCGCGGTGGAGGAAAATGAGAGTC
CAGTAGCTGCTGCAGAAGCTGAAGAGAGCTCGCGAGAACTTGAGAGAAAA
ATAATAGAATCCTTCACTGTCGCAGGAGGCAATCGTGCTGAGGAAAGAAT
GGCGAGGAAGAAAACAGAACGGTTCACTTACTTGGTCGCGGCTGTCATGT
CTAGCTTCGGGATCACATCGATGGCTGTCTTCGCCGTCTACTCAAGGTTC
GCTTGGCAAATGGAGGTACATTTTTTACATGCATACGTGGAGGTCATCTT
ATGTATTTCTCGCGATGCTTTCTAAACACTGAAAAGGATTTCGCAAAATG
TATACAGGGTGGAGAGGTTCCTCACTCAGAGATGCTTGCCACATTTTCAC
TTGCTTTCGGGGCTGCAGTAAGTAATCTCTTCTTAATCCAAAACAAATCC
CGCAGCTCATTTCTAAGAAATATGATCAATTTAACTTATGACCTGTCTGG
GAACCTGAATTCATTTGAAATTGTGGATTTAATCAAATACCGGTTTGGGA
ATTTGGATTTGGATTTCATTTGAAATCCACACATTCAAATATTAGTATAA
ATCTGAGAATTTGAAATGACAACTCAAATCTTGTCAATTGAAATCCATCA
TTTCAAATTGAATACATGTTTCCAAACGGCCTCTTACTGAAATTCACTGC
TCTAGGTTGGCATGGAGTACTGGGCAAGATGGGCGCACAAAGCGCTATGG
CACGATTCGTTGTGGCATATGCACGAGGTATTCAAAATCTGCGGCCATCT
AAACCAATCCGAATCAATCTAATTACGTATTTATATGTGCGCATCTGAAA
TGCAGTCACACCATAAACCAAGAGAAGGAGCATTTGAGCTGAACGATGTT
TTCGCTATAATAAACGCGGTTCCAGCCATAGCGCTTCTCGCCTATGGCTT
CTTCCACAAAGGCCTCTTTCCTGGCCTTTGTTTCGGTGCTGTATGTCTAA
ATCTTCTGTTTCCTCAATTTCAGAGAAAATAAACTAGTGTATTTCTGTCT
TGCATAATTTAAGGGCGTGACTGTTGTTTGTTTGTTTATGAACTAACAGT
GACAGCTACTGTATTTATTCCAGGGACTTGGAATCACGGTGTTCGGGATG
GCCTACATGTTTGTCCACGATGGTCTTGTTCACAAAAGGTTCCCTGTGGG
CCCTGTAGCCAATGTGCCCTACTTGAGAAAAGTTGCCGCTGCCCACCAGG
TTTGTTCACACTCTATTCTTTATTCCCCGTAGTCGTATTCGTGTCATACA
CTGGATACTCGGAAAATCGCGTATTGAACACATTTGTAGTCGAGTCCGGG
TAACTCAGCTGTTTGATATATATGTGTTGTGCCTGTATAGCTGCACCACA
TGGAGAAGTTCAACGGAGTGCCGTTCGGGTTGTTTTTGGGACCTCAGGTT
CGAGTCCTCTTTTGAGTACTTCATATGTGTTATTATTCAGGTTTAATCTA
AATTAAAGTGTTATGTTTAGATGATAATTAATATAAAGAAATTATTTGAT
TGGCTGCAGGAATTGGAACAAGTCGGCGGAAATGAAGAGCTGGAGAAAGA
GATCAATCGAAGAATCAAATCCTCTAACTAATAATAATCAGTTTTGTATG
ATAGTACAACTTCATACTATAGAGTATACATTAATGAAATGAAAGTATAT
TTTTCTGGTTCTTACTTAGTTGTCTTGGCTTCTGTTGCTCATAACATCCG
CGGAATCGAATTCTCACTCCCCA

Sequence Length

2123

Sequence MD5 Checksum

43784303913027b207af61a17f54ad6f

Relationship

The mRNA DCAR_014519 is a part of Gene DCAR_014519
The Genetic Marker MK017961 4_21219396 is located in Gene DCAR_014519
The Genetic Marker MK000044 CHXB3 is located in Gene DCAR_014519

Database Reference Annotations

GFF_source:.

Publication

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Analysis

Is Analysis

False

Is Obsolete

False