DCAR_001635 | CarrotOmics Tripal4

Cds

>DCAR_001635cds ATGGCAGTTTTAGAACAAAGTGATCATCAACTTGAGCAAGGAACATTGTC TTTCTTGATAGAATCTTTGTTTTGTGATGAACAAGTTGAGGTTGAGAGCT TATTAGAAGGAGAGATTAGTAATAAAGATTACAACTTTGTCGAAAATTCG AGAAATCAAACAAGCCCTCCTCTGGTTTTGGTGGAAAATGATTTGGCTTG GGAAGATGAAGAGCTGGATTCTCTGTTTTGTAAAGAAAGGCAAGCACATT TCTGTTTTCTTGGTGAAACAATGGGATCTTGCTCTTTAAATGTGGTGGAT AGAGGGAATGCTGTGGATTGGATGCTAAAAGTGAGAGCCCATTATGGATT CTCAGCTCTTACAGTAGTTTTGGCCATGAATTACTTTGATAGATTTGTCT CCGGTGTCGAGTTTCAAGAAGATGAGCCCTGGATGGTTGGAGAGTCAGAA TATGTTTTCGAGGCTAAAACAATTCAGAATATGGAGCTTCTGGTGATGTC GACTCTCCGATGGAGAATGAGTGCAGTGACCCCACTCTCATTTCTTGATC ACATCACAAGGAGGCTTGGTTTAAAGAGTGATCTCCACTGGGAGTTCTAC AGAAATTCTGAAACTCTCCTCCTATCTGTTGTAGCAGATTGGAGATTCAC AAGTTATTTACCGTCTGTGCTGGCCACTGCAACAATGCTTCATGTTATAC ATCAAGTTGAGCCCTGCAATGCCATTGAATATCAGAATCAGCTTCTGGCT ATTTTCAGAACCACCAAGGAGGAAATTAAGGAATGCTGTGAACTCGTTTC GTATGTATCAAACAGTTTTTACGTAAATGGAAATAATTCTCAGAAGAGAA AGTATGAAGAAAATTTTGAAATCCCAGGCGGCCTTAGCAAGACTACTGAT GCATCTTTCAACACTAAATCTAAGATTCACAAGAGACAGTGTGAAGAAGA AAAAGAAGTAAATTGTGAAATCCCAAGCAGCCTTAGTGGGATTACTGATG CATCTTTCAGCACTGCTAATTCTGCAGATAATGATATTTCCAGTGCATGG TCAGTTTCATGTTCACCAGAGTCAGCAGTGAAACACCAAATGATTAAAAA ACAGAAGTTGCACATGCCAGCACTCAGAAGTTTGGCAATGGATATCTTTT AA

Locus_tag

DCAR_001635

Name

DCAR_001635

Organism

Daucus carota subsp. sativus

Pep

>DCAR_001635pep MAVLEQSDHQLEQGTLSFLIESLFCDEQVEVESLLEGEISNKDYNFVENS RNQTSPPLVLVENDLAWEDEELDSLFCKERQAHFCFLGETMGSCSLNVVD RGNAVDWMLKVRAHYGFSALTVVLAMNYFDRFVSGVEFQEDEPWMVGESE YVFEAKTIQNMELLVMSTLRWRMSAVTPLSFLDHITRRLGLKSDLHWEFY RNSETLLLSVVADWRFTSYLPSVLATATMLHVIHQVEPCNAIEYQNQLLA IFRTTKEEIKECCELVSYVSNSFYVNGNNSQKRKYEENFEIPGGLSKTTD ASFNTKSKIHKRQCEEEKEVNCEIPSSLSGITDASFSTANSADNDISSAW SVSCSPESAVKHQMIKKQKLHMPALRSLAMDIF*

Sequence Coordinates

DCARv2_Chr1:18593391..18595069-

Type

gene

Unique Name

DCAR_001635.gene

Sequence Residues

ATGGCAGTTTTAGAACAAAGTGATCATCAACTTGAGCAAGGAACATTGTC
TTTCTTGATAGAATCTTTGTTTTGTGATGAACAAGTTGAGGTTGAGAGCT
TATTAGAAGGAGAGATTAGTAATAAAGATTACAACTTTGTCGAAAATTCG
AGAAATCAAACAAGCCCTCCTCTGGTTTTGGTGGAAAATGATTTGGCTTG
GGAAGATGAAGAGCTGGATTCTCTGTTTTGTAAAGAAAGGCAAGCACATT
TCTGTTTTCTTGGTGAAACAATGGGATCTTGCTCTTTAAATGTGGTGGAT
AGAGGGAATGCTGTGGATTGGATGCTAAAAGTGAGAGCCCATTATGGATT
CTCAGCTCTTACAGTAGTTTTGGCCATGAATTACTTTGATAGATTTGTCT
CCGGTGTCGAGTTTCAAGAAGATGAGCCCTGGATGGTTCAGCTGGCTGCT
GTCACTTGTCTGACACTGGCTGCAAAACTTGAGGAGACCCAAGTTCCCCT
TCTACTTGACATTCAAGTATGCACCATCCTTAAACACACACACACACACA
CACACACACACACACACTCTTTAGTGATTTATGGATTCTAGAAAGTCAGA
TTTTGGTGATTTGGTGTAAAACATGCAGTTTTTTGCTAAGATTTTATATG
TTTCTTGATTTATTAGGTTGGAGAGTCAGAATATGTTTTCGAGGCTAAAA
CAATTCAGAATATGGAGCTTCTGGTGATGTCGACTCTCCGATGGAGAATG
AGTGCAGTGACCCCACTCTCATTTCTTGATCACATCACAAGGAGGCTTGG
TTTAAAGAGTGATCTCCACTGGGAGTTCTACAGAAATTCTGAAACTCTCC
TCCTATCTGTTGTAGCAGGTAAATCCCCCACTTTTTTTCTGCAGAAGAAT
AATGTTAATTTTAGGTTGCAGATAGATAATCACCAATTCATTGATGATTG
AAAATTATAGATTGGAGATTCACAAGTTATTTACCGTCTGTGCTGGCCAC
TGCAACAATGCTTCATGTTATACATCAAGTTGAGCCCTGCAATGCCATTG
AATATCAGAATCAGCTTCTGGCTATTTTCAGAACCACCAAGGTGAGTTAG
TCTGCACTTTGAACCTTCCATTTATTTTTCAAGGCGAGCGGGGTTTTGAA
AAAGTTCCCTACCCTATTCAAGTAGTCAAGTACTCATGCATACATGTCTC
CGACGAGATTTTAAAAATCTCCCCTAACACTTGGATTATTATTGCTTAAA
ATTTCATTTAAATTCTAAAGCAAATAAGAATTTTCTTTCAACAGGAGGAA
ATTAAGGAATGCTGTGAACTCGTTTCGTATGTATCAAACAGTTTTTACGT
AAATGGAAATAATTCTCAGAAGAGAAAGTATGAAGAAAATTTTGAAATCC
CAGGCGGCCTTAGCAAGACTACTGATGCATCTTTCAACACTAAATCTAAG
ATTCACAAGAGACAGTGTGAAGAAGAAAAAGAAGTAAATTGTGAAATCCC
AAGCAGCCTTAGTGGGATTACTGATGCATCTTTCAGCACTGCTAATTCTG
CAGATAATGATATTTCCAGTGCATGGTCAGTTTCATGTTCACCAGAGTCA
GCAGTGAAACACCAAATGATTAAAAAACAGAAGTTGCACATGCCAGCACT
CAGAAGTTTGGCAATGGATATCTTTTAA

Sequence Length

1678

Sequence MD5 Checksum

ef89e2513042b4dce4e3c15c3a3799c9

Relationship

The DCAR_001635 is a part of Gene DCAR_001635
The Genetic Marker MK016711 SSR0275 is located in Gene DCAR_001635

Database Reference Annotations

GFF_source:.

Publication

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Analysis

Is Analysis

False

Is Obsolete

False