DCAR_011197 | CarrotOmics Tripal4

Cds

>DCAR_011197cds ATGGCACTCAGATCCTTCTTTCACCTTCTGGCCTCCCTCTTACTTGTTTC AACAATGGTTTTATCAGAAAGTGAACAACTCCTGGAGAGTGGCATTATTA CCAAAGTACCACCACATGCACAGAGTCCCCTCAAGTCACCTATTGCTCCT GCTCCTGCTCCTACTCCAGTAGCTGCCCCAGTGAAGGCACCACCACCTGT AGCTCCTACTCCAGTCAAGATTCCACCTCCTCCGGTACAATCCAAGGCCC CACCACCACCACAACCACCAGTCCCAGTCAAGGTGCCACCACCACCACGT CCATCTGTGAAGCCACCTTCTCCTCCAATTTCACCACCACCCCCTTCACC ACCAAGAAACACTAAAGAGTGTTACCCTCCATGCTTGGTGAGGTGCAAGC TACACTCAAGAAAGAATGTGTGCCTAAGAGCTTGTGTGACATGCTGTGAC AGATGCAAATGTGTGCCTCCAGGACAGTTTGGAAACAAAGAGAAATGTGG CAAATGCTATGCTAATATGACCACTCATGGTGGCAAAAGCAAGTGCCCTT GA

Locus_tag

DCAR_011197

Name

DCAR_011197

Organism

Daucus carota subsp. sativus

Pep

>DCAR_011197pep MALRSFFHLLASLLLVSTMVLSESEQLLESGIITKVPPHAQSPLKSPIAP APAPTPVAAPVKAPPPVAPTPVKIPPPPVQSKAPPPPQPPVPVKVPPPPR PSVKPPSPPISPPPPSPPRNTKECYPPCLVRCKLHSRKNVCLRACVTCCD RCKCVPPGQFGNKEKCGKCYANMTTHGGKSKCP*

Sequence Coordinates

DCARv2_Chr3:33529422..33530849-

Type

gene

Unique Name

DCAR_011197.gene

Sequence Residues

CAAAAGATATTGATATGATCTCGCGTACATTATTCATTTCAATTTTATGA
TTTTGAAGGCATCCATCTTTTTTTTTTATAACCTCAGAACGATCCTAAAA
TTAACCACGCTTCCACAACATGCAGGTGGTTCGCTACAGTAAATCTGTCA
ATGGTGTTTGGTTCGATTTCAGTTTTCATATTTAGAAGCCGCACATTTGT
GATTCTGCTTGCAATTTTAAGTGCAAACCGCATCATGTATATCCCTACTT
GAGAGATTAATTTTAATGCACACTTGAACAAAACTCTAAATTAAAGCAGA
CTGGTGACTGGCCTGGTGTTATCAGCTAAACAGTGATGGCTCACCGCCTC
ACCTCAAGCAGCTGTCACCCATTCCTTAAATATGATCTTAATGGGCCATT
CCTACCTTGCAACAACCCTCCTATCTCTTCTCATCTCTCTACTTATATCA
CTCCACTCACTCCCCATTCTGCTCAAAACCACCTTCTAACAACATGGCAC
TCAGATCCTTCTTTCACCTTCTGGCCTCCCTCTTACTTGTTTCAACAATG
GTATGGTGTGTTTATATGAAAATCAATAAAATACTACAGCTAAAAGTTCA
TTTAGTTTCTGACCATGTTTTACTTCATTTTATGGTGTTTGTAGGTTTTA
TCAGAAAGTGAACAACTCCTGGAGGTAAAACATAAGTACAACACACTGTA
AATCACTAGCTTACAAGATATTTCATTAAGCTCCTTGTATTTTTTTGACT
TTTGTGAACTTTTATCTTGTTCTCTAGAGTGGCATTATTACCAAAGTACC
ACCACATGCACAGAGTCCCCTCAAGTCACCTATTGCTCCTGCTCCTGCTC
CTACTCCAGTAGCTGCCCCAGTGAAGGCACCACCACCTGTAGCTCCTACT
CCAGTCAAGATTCCACCTCCTCCGGTACAATCCAAGGCCCCACCACCACC
ACAACCACCAGTCCCAGTCAAGGTGCCACCACCACCACGTCCATCTGTGA
AGCCACCTTCTCCTCCAATTTCACCACCACCCCCTTCACCACCAAGAAAC
ACTAAAGGTAGTAGCTTTATCTCATAAATGCATTCCATTCATATTATTAT
TAATTTGTGTCATCTGAAGATTGAGTGGACATACATATTTTTGGGTGCAG
AGTGTTACCCTCCATGCTTGGTGAGGTGCAAGCTACACTCAAGAAAGAAT
GTGTGCCTAAGAGCTTGTGTGACATGCTGTGACAGATGCAAATGTGTGCC
TCCAGGACAGTTTGGAAACAAAGAGAAATGTGGCAAATGCTATGCTAATA
TGACCACTCATGGTGGCAAAAGCAAGTGCCCTTGAACATTTTACTCCCAA
ATGCTATGTAATATGCATGTAACTCTAAATATTAAGAATTTTTAAGTATC
AATGTATCATGGGGAAAAGCTAAGTAT

Sequence Length

1427

Sequence MD5 Checksum

074393463455bc23aaca40c448e96c6a

Relationship

The mRNA DCAR_011197 is a part of Gene DCAR_011197
The Genetic Marker MK002162 ESSR-057 is located in Gene DCAR_011197

Database Reference Annotations

GFF_source:.

Publication

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Analysis

Is Analysis

False

Is Obsolete

False