XM_017371051.1 | CarrotOmics Tripal4

Gbkey

mRNA

Gene

LOC108202572

Model_evidence

Supporting evidence includes similarity to: 3 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns

Name

XM_017371051.1

Organism

Daucus carota subsp. sativus

Product

protein GIGANTEA, transcript variant X3

Transcript_id

XM_017371051.1

Type

mRNA

Unique Name

XM_017371051.1

Sequence Residues

AGAGGAAAATATCATAGCCACGTTGGCAGATTGCACAACTAGAGGAAGAG
AGAGAGGCCAGTTAAAGATCTCATCTCTCTCCTCTCATCTCTCTCTATCT
CTCCCAAACTGCTTTGCTTAAAAAACACTCTCAAAACTCATTTTACAGAC
AGTAAACCTAAGCCCAAAAACTCAAGAACATAAACTCCATCTCATCCACA
AAGATTCTCAGCCTTATATTTCTTCACCTAGGAATCCAGATATCAACTGT
ACACATATATTTATCCAGTCATGGAACGGTAACTGAAGCCGACTGAAGCT
TGCAGCTTCCAACGTGTTGGTTTTACGAGCTTTCCCCTGAAAAAAGTAAC
AATGGCTACCTCTTGTGAGAGGTGGATTGATGGTCTTCAGTTCTCCTCAG
TGTTTTGGCCGCCTCCACATGACAAACATCAAAAGAAGGCTCAAATCACT
GCATATGTTGATTACTTTGCTCAATTCACATCAGAACAGTTTCCTGACGA
TATAGCCGAGCTAATACGGAACCGTTACCCTTCAAACGAAAAACGCCTCT
TTGATGATGTCCTAGCAACATTTGTCCTTCATCATCCAGAGCATGGACAC
ACTGTCATTCTCCCTATTATTTCATGTATTATTGATAGCACAATGGAATA
TGACAAGACTGCACCCCCTTTTTCGTCTTTCATTTCGTTGGTCTGCCCTA
GCAGTGTGGACGAGTACTCTGAGCAGTGGGCTTTGGCTTGTGGTGAAATC
CTGCGAATATTAACTCATTATAACCGGCCAATTTACAAGGTTGAGCGCCA
GCACAGTGAAGCAGATAGAAGTAACAGTGGCAGTCATGCTACGACAAGTA
ACTCTATAGACGGGGAATCAATTCCACCACCTGTACAACATGAAAAGAAA
CCACTCCGGCCCCTTTCCCCCTGGATAACTGATATATTGCTCGCTGCCCC
ACTTGCTATTAGAAGTGACTACTTTCGTTGGTGTGGTGGTGTGATGGGCA
AATATGCTGCTGGAGAGCTTAAGCCACCATCTATATCTTCTTCATGTGGA
TCTGGAAAGCACCCTCAGCTAATGCCATCAACTCCGAGATGGGCTGTAGC
TAATGGCGCTGGTGTGATATTAAGTGTTTGTGATGAAGAAGTGGCACGCT
ATGAGACTGCTACTTTAACTGCAGCTGCCGTTCCTGCTCTCCTCCTCCCC
CCTCCAACGACATCTATGGATGAACATCTTGTTGCAGGGCTGCCGGCTTT
GGAGCCATATGCCCGGTTATTTCATAGATACTATGCTATTGCTAGTCCAA
GTGCCACCCAAAGACTTCTTCTTGGGCTTCTAGAAGCACCACCATCATGG
GCTCCAGATGCCCTGGATGCAGCTGTGCAACTTGTTGAGCTCCTGAGAGC
AGCCGAAGACTACGCGTCTGGAATGAGGCTTCCAAGGAACTGGATGCATT
TGCATTTCTTGCGAGCAATTGGGACTGCAATGTCCACGAGAGCAGGTATC
GCGGCAGATGCAGCAGCTGCTTTATTGTTTCGTGTACTTTCACAACCTGC
TTTGCTTTTTCCTGCGCCAAGACAAGTTGAAGGGATTGAAGCTCACCCTG
AACCAATGGGTTCCATTTCATGGCAGAAAAAGCAGAGAGAACAGCCATCT
GCTGAAGCAACTATAGAAGCTACTGCCCAAGGGATTGCATCACTGCTTTG
TTCTCATGGTCCTGAGGTTGAATGGAGAATATGTACTATATGGGAAGCAG
CTTATGGCCTAATTCCTTTAAGTTCATCAGCTGTTGATCTTCCAGAAATT
ATAGTCGCAACTCCATTACAACCACCGATCTTATCTTGGAACCTCTATAT
TCCTCTACTTAAAGTATTAGAGTATCTTCCTCGTGGTAGTCCTTCCGAAG
CATGTCTCATGAAGATTTTTGTTGCATCCGTAGAGGCAATTCTCCAAAGA
ACATTTCCACCCGAGCCCTCCAGAGAAGAAGAAAGGAAAACAAGATATTC
TTTTGGGTCTGCCTCTAAAAATCTTGCTGTCGCAGAGCTTCGCACAATGG
TCCACTCTCTATTTGTAGAATCTTGCGCCTCAGTAGAGCTTGCTTCTCGC
CTACTTTTTGTTGTGTTAACTGTGTGTGTTAGTCATGAAGCACAGCCCAA
CAGGGGCAAAAGGCCAAGAGGCGAAGACACTTACCCTTCTGAAGAATTTA
CCGAGGAGATGTTGGCAGTAAATAGAACACAACGAGACCGAGGAACCCAG
AAATTAAAAAGACAAGGACCTGTTGCAGCATTCGATTCTTATGTCCTTGC
TGCTGTCTGTGCTCTTGCTTGTGAAATCCAGCTCTTCCCTTTAATCTCAA
GGGTTGGTAATAAGGCTGCTTCAAATGGTATAAAAGATGTAGTCAAACCT
GTGAAAGTCAACGAGCCTCGTAGCGACTTTCGCAATAGCGTCGACTCTGC
TGTTTGTCATACTCGCAGGATATTGTCAATTTTAGAAGCGCTCTTTGCTT
TGAAGCCGTCTTCAGTTGGCACATCTTGGAGTTACAGTTCAAACGAAATT
GTTGCAGCTGCTATGGTTGCCGCTCATATTTCTGAACTATTCAGACGGTC
AAAGGCTTGTATGCAAGCTCTCTCTGTGTTAATGCGCTGCAAGTGGGATA
ATGAAATACACTCCAGAGCATCTTCTCTATATAATCTTATTGATATCCAT
AGAAAAGCTGTAGCATCTATTGTTAACAAGGCACAGCCGCTTAAAGCACA
CTTAATGCATGCACCTATTAGGAAGGAGTCTTCTTTAATTGTCCCTGAAC
AAATTCAAAATGAAATTTCAAGTTCTTCGTGCTCCGACTCTTCACGGGGT
TTACAGTCTCAAGATTCTGGAAATTCAAGATCTTTATTTAAGTGTAGGAA
AGTTTCCCATCCATGCGATGAGACCAGAAGTAACTCGGGCAAAGAAGTCG
CAAGTTTCCCATTTAATGCTTCAGATTTGGCCAACTTTCTTACAATGGAC
AGGCACATAGGATTTAATTGCAGTGCAAAAGTCCTTTTAAGATCTCTGCT
GACAGAGAAACAAGAATTATGTTTCTCTGTCGTTTCTTTGCTATGGTACA
AATTGATTGCAGCACCAGAAACACAACCTACTGCAGAAAGTACTTCTGCC
CAGCAAGGATGGAGACAGGTAGTTGATGCTCTCTGCAATGTGGTAAAAGC
ATCACCGACAAAAGCTGCAACAGCTGTTGTTCTTCAGGCAGAGAAAGAGT
TGCAAACATGGATTGCTAAAGACGATGACCACGGTCAAAAGATGTGGAGG
ATCAACCAGCGCATTGTAAAACTGATTGTAGAGCTAATGAGAAATCATGA
AACTCCTGAGTCCTTGATAATATTAGCTAGTGCTTTGGACCTCCTTCGAC
GTGCTACAGACGGAATGCTTGTTGATGGAGAAGCATGCACTTTGCCTCAG
CTGGAGCTTCTAGAAGCAACAGCAAGAGCAATCGAACCAGTACTTGAGTG
GGGTGAATCTGGGGCTGCAGTGGCTGATGGGCTCTCAAACCTGTTAAAGT
GTCGCCTTCCAGCTACAGTACGGTGTCTTTCTCACCCAAGTGCTCATGTC
CGTGCTCTCAGCATATCAGTTCTTCGAGCTATTCTCCATGCTGGTTCAAT
ACATTCTGGTGGTAAACAAGTGGAGATAAGTAGCATCGTCCATAACCCTG
CTTATCAGTACCTCAATGTAGACATTATTGACTGGCAAGCTGATATCGAG
AAGTGTCTAACATGGGAAGCTCATAGTCGACTTGCAACAGGGATGCATAT
GCAATTTCTCGATACTGCTGCCAAGGAATTAGGATGTACATTATCCATTT
GAACTTCGAAACTAACTCTACGTGCAAAAGGCTCCCACATCCTTGCATTT
TTGGCCCTTGTTACCCCTTCGAAGACTTGCAATTGCCTGAAGGATGTCTG
AATTTTAAAGGACAAAATTGTGTCCCTCGTGATGATCATGTATAGTGGAT
TATTCATGTTTAGAGATGTATTTGCAAGTACATGCTTACCTTTCGCCCTT
TGGGTTAGTTTTAATATGGATTACTTTGACTCAGGAAATGATGTTGAATA
TAACTTGGTTCAGAGTTTTCTAGCTCGACTGTAATAATGTTTGTTTGCGC
CCCTTAA

Sequence Length

4157

Sequence MD5 Checksum

b7333f3500193c03c9203d6236c5613f

Relationship

The XM_017371051.1 derives from mRNA XM_017371051.1
The mRNA XM_017371051.1 is a part of Gene LOC108202572
The XP_017226540.1 is a part of mRNA XM_017371051.1
The XM_017371051.1.exon16 is a part of mRNA XM_017371051.1
The XM_017371051.1.exon15 is a part of mRNA XM_017371051.1
The XM_017371051.1.exon14 is a part of mRNA XM_017371051.1
The XM_017371051.1.exon13 is a part of mRNA XM_017371051.1
The XM_017371051.1.exon12 is a part of mRNA XM_017371051.1
The XM_017371051.1.exon11 is a part of mRNA XM_017371051.1
The XM_017371051.1.exon10 is a part of mRNA XM_017371051.1
The XM_017371051.1.exon9 is a part of mRNA XM_017371051.1
The XM_017371051.1.exon8 is a part of mRNA XM_017371051.1
The XM_017371051.1.exon7 is a part of mRNA XM_017371051.1
The XM_017371051.1.exon6 is a part of mRNA XM_017371051.1
The XM_017371051.1.exon5 is a part of mRNA XM_017371051.1
The XM_017371051.1.exon4 is a part of mRNA XM_017371051.1
The XM_017371051.1.exon3 is a part of mRNA XM_017371051.1
The XM_017371051.1.exon2 is a part of mRNA XM_017371051.1
The XM_017371051.1.exon1 is a part of mRNA XM_017371051.1

Database Reference Annotations

Analysis

Is Analysis

False

Is Obsolete

False