XM_017371046.1 | CarrotOmics Tripal4

Gbkey

mRNA

Gene

LOC108202572

Model_evidence

Supporting evidence includes similarity to: 3 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns

Name

XM_017371046.1

Organism

Daucus carota subsp. sativus

Product

protein GIGANTEA, transcript variant X2

Transcript_id

XM_017371046.1

Type

mRNA

Unique Name

XM_017371046.1

Sequence Residues

AGAGGAAAATATCATAGCCACGTTGGCAGATTGCACAACTAGAGGAAGAG
AGAGAGGCCAGTTAAAGATCTCATCTCTCTCCTCTCATCTCTCTCTATCT
CTCCCAAACTGCTTTGCTTAAAAAACACTCTCAAAACTCATTTTACAGAC
AGTAAACCTAAGCCCAAAAACTCAAGAACATAAACTCCATCTCATCCACA
AAGATTCTCAGCCTTATATTTCTTCACCTAGCGGTAACTGAAGCCGACTG
AAGCTTGCAGCTTCCAACGTGTTGGTTTTACGAGCTTTCCCCTGAAAAAA
GTAACAATGGCTACCTCTTGTGAGAGGTGGATTGATGGTCTTCAGTTCTC
CTCAGTGTTTTGGCCGCCTCCACATGACAAACATCAAAAGAAGGCTCAAA
TCACTGCATATGTTGATTACTTTGCTCAATTCACATCAGAACAGTTTCCT
GACGATATAGCCGAGCTAATACGGAACCGTTACCCTTCAAACGAAAAACG
CCTCTTTGATGATGTCCTAGCAACATTTGTCCTTCATCATCCAGAGCATG
GACACACTGTCATTCTCCCTATTATTTCATGTATTATTGATAGCACAATG
GAATATGACAAGACTGCACCCCCTTTTTCGTCTTTCATTTCGTTGGTCTG
CCCTAGCAGTGTGGACGAGTACTCTGAGCAGTGGGCTTTGGCTTGTGGTG
AAATCCTGCGAATATTAACTCATTATAACCGGCCAATTTACAAGGTTGAG
CGCCAGCACAGTGAAGCAGATAGAAGTAACAGTGGCAGTCATGCTACGAC
AAGTAACTCTATAGACGGGGAATCAATTCCACCACCTGTACAACATGAAA
AGAAACCACTCCGGCCCCTTTCCCCCTGGATAACTGATATATTGCTCGCT
GCCCCACTTGCTATTAGAAGTGACTACTTTCGTTGGTGTGGTGGTGTGAT
GGGCAAATATGCTGCTGGAGAGCTTAAGCCACCATCTATATCTTCTTCAT
GTGGATCTGGAAAGCACCCTCAGCTAATGCCATCAACTCCGAGATGGGCT
GTAGCTAATGGCGCTGGTGTGATATTAAGTGTTTGTGATGAAGAAGTGGC
ACGCTATGAGACTGCTACTTTAACTGCAGCTGCCGTTCCTGCTCTCCTCC
TCCCCCCTCCAACGACATCTATGGATGAACATCTTGTTGCAGGGCTGCCG
GCTTTGGAGCCATATGCCCGGTTATTTCATAGATACTATGCTATTGCTAG
TCCAAGTGCCACCCAAAGACTTCTTCTTGGGCTTCTAGAAGCACCACCAT
CATGGGCTCCAGATGCCCTGGATGCAGCTGTGCAACTTGTTGAGCTCCTG
AGAGCAGCCGAAGACTACGCGTCTGGAATGAGGCTTCCAAGGAACTGGAT
GCATTTGCATTTCTTGCGAGCAATTGGGACTGCAATGTCCACGAGAGCAG
GTATCGCGGCAGATGCAGCAGCTGCTTTATTGTTTCGTGTACTTTCACAA
CCTGCTTTGCTTTTTCCTGCGCCAAGACAAGTTGAAGGGATTGAAGCTCA
CCCTGAACCAATGGGTTCCATTTCATGGCAGAAAAAGCAGAGAGAACAGC
CATCTGCTGAAGCAACTATAGAAGCTACTGCCCAAGGGATTGCATCACTG
CTTTGTTCTCATGGTCCTGAGGTTGAATGGAGAATATGTACTATATGGGA
AGCAGCTTATGGCCTAATTCCTTTAAGTTCATCAGCTGTTGATCTTCCAG
AAATTATAGTCGCAACTCCATTACAACCACCGATCTTATCTTGGAACCTC
TATATTCCTCTACTTAAAGTATTAGAGTATCTTCCTCGTGGTAGTCCTTC
CGAAGCATGTCTCATGAAGATTTTTGTTGCATCCGTAGAGGCAATTCTCC
AAAGAACATTTCCACCCGAGCCCTCCAGAGAAGAAGAAAGGAAAACAAGA
TATTCTTTTGGGTCTGCCTCTAAAAATCTTGCTGTCGCAGAGCTTCGCAC
AATGGTCCACTCTCTATTTGTAGAATCTTGCGCCTCAGTAGAGCTTGCTT
CTCGCCTACTTTTTGTTGTGTTAACTGTGTGTGTTAGTCATGAAGCACAG
CCCAACAGGGGCAAAAGGCCAAGAGGCGAAGACACTTACCCTTCTGAAGA
ATTTACCGAGGAGATGTTGGCAGTAAATAGAACACAACGAGACCGAGGAA
CCCAGAAATTAAAAAGACAAGGACCTGTTGCAGCATTCGATTCTTATGTC
CTTGCTGCTGTCTGTGCTCTTGCTTGTGAAATCCAGCTCTTCCCTTTAAT
CTCAAGGGTTGGTAATAAGGCTGCTTCAAATGGTATAAAAGATGTAGTCA
AACCTGTGAAAGTCAACGAGCCTCGTAGCGACTTTCGCAATAGCGTCGAC
TCTGCTGTTTGTCATACTCGCAGGATATTGTCAATTTTAGAAGCGCTCTT
TGCTTTGAAGCCGTCTTCAGTTGGCACATCTTGGAGTTACAGTTCAAACG
AAATTGTTGCAGCTGCTATGGTTGCCGCTCATATTTCTGAACTATTCAGA
CGGTCAAAGGCTTGTATGCAAGCTCTCTCTGTGTTAATGCGCTGCAAGTG
GGATAATGAAATACACTCCAGAGCATCTTCTCTATATAATCTTATTGATA
TCCATAGAAAAGCTGTAGCATCTATTGTTAACAAGGCACAGCCGCTTAAA
GCACACTTAATGCATGCACCTATTAGGAAGGAGTCTTCTTTAATTGTCCC
TGAACAAATTCAAAATGAAATTTCAAGTTCTTCGTGCTCCGACTCTTCAC
GGGGTTTACAGTCTCAAGATTCTGGAAATTCAAGATCTTTATTTAAGTGT
AGGAAAGTTTCCCATCCATGCGATGAGACCAGAAGTAACTCGGGCAAAGA
AGTCGCAAGTTTCCCATTTAATGCTTCAGATTTGGCCAACTTTCTTACAA
TGGACAGGCACATAGGATTTAATTGCAGTGCAAAAGTCCTTTTAAGATCT
CTGCTGACAGAGAAACAAGAATTATGTTTCTCTGTCGTTTCTTTGCTATG
GTACAAATTGATTGCAGCACCAGAAACACAACCTACTGCAGAAAGTACTT
CTGCCCAGCAAGGATGGAGACAGGTAGTTGATGCTCTCTGCAATGTGGTA
AAAGCATCACCGACAAAAGCTGCAACAGCTGTTGTTCTTCAGGCAGAGAA
AGAGTTGCAAACATGGATTGCTAAAGACGATGACCACGGTCAAAAGATGT
GGAGGATCAACCAGCGCATTGTAAAACTGATTGTAGAGCTAATGAGAAAT
CATGAAACTCCTGAGTCCTTGATAATATTAGCTAGTGCTTTGGACCTCCT
TCGACGTGCTACAGACGGAATGCTTGTTGATGGAGAAGCATGCACTTTGC
CTCAGCTGGAGCTTCTAGAAGCAACAGCAAGAGCAATCGAACCAGTACTT
GAGTGGGGTGAATCTGGGGCTGCAGTGGCTGATGGGCTCTCAAACCTGTT
AAAGTGTCGCCTTCCAGCTACAGTACGGTGTCTTTCTCACCCAAGTGCTC
ATGTCCGTGCTCTCAGCATATCAGTTCTTCGAGCTATTCTCCATGCTGGT
TCAATACATTCTGGTGGTAAACAAGTGGAGATAAGTAGCATCGTCCATAA
CCCTGCTTATCAGTACCTCAATGTAGACATTATTGACTGGCAAGCTGATA
TCGAGAAGTGTCTAACATGGGAAGCTCATAGTCGACTTGCAACAGGGATG
CATATGCAATTTCTCGATACTGCTGCCAAGGAATTAGGATGTACATTATC
CATTTGAACTTCGAAACTAACTCTACGTGCAAAAGGCTCCCACATCCTTG
CATTTTTGGCCCTTGTTACCCCTTCGAAGACTTGCAATTGCCTGAAGGAT
GTCTGAATTTTAAAGGACAAAATTGTGTCCCTCGTGATGATCATGTATAG
TGGATTATTCATGTTTAGAGATGTATTTGCAAGTACATGCTTACCTTTCG
CCCTTTGGGTTAGTTTTAATATGGATTACTTTGACTCAGGAAATGATGTT
GAATATAACTTGGTTCAGAGTTTTCTAGCTCGACTGTAATAATGTTTGTT
TGCGCCCCTTAA

Sequence Length

4112

Sequence MD5 Checksum

fd082049bab511be09869973065ff4c6

Relationship

The XM_017371046.1 derives from mRNA XM_017371046.1
The mRNA XM_017371046.1 is a part of Gene LOC108202572
The XP_017226535.1 is a part of mRNA XM_017371046.1
The XM_017371046.1.exon15 is a part of mRNA XM_017371046.1
The XM_017371046.1.exon14 is a part of mRNA XM_017371046.1
The XM_017371046.1.exon13 is a part of mRNA XM_017371046.1
The XM_017371046.1.exon12 is a part of mRNA XM_017371046.1
The XM_017371046.1.exon11 is a part of mRNA XM_017371046.1
The XM_017371046.1.exon10 is a part of mRNA XM_017371046.1
The XM_017371046.1.exon9 is a part of mRNA XM_017371046.1
The XM_017371046.1.exon8 is a part of mRNA XM_017371046.1
The XM_017371046.1.exon7 is a part of mRNA XM_017371046.1
The XM_017371046.1.exon6 is a part of mRNA XM_017371046.1
The XM_017371046.1.exon5 is a part of mRNA XM_017371046.1
The XM_017371046.1.exon4 is a part of mRNA XM_017371046.1
The XM_017371046.1.exon3 is a part of mRNA XM_017371046.1
The XM_017371046.1.exon2 is a part of mRNA XM_017371046.1
The XM_017371046.1.exon1 is a part of mRNA XM_017371046.1

Database Reference Annotations

Analysis

Is Analysis

False

Is Obsolete

False