XM_017374610.1 | CarrotOmics Tripal4

Gbkey

mRNA

Gene

LOC108204919

Model_evidence

Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns

Name

XM_017374610.1

Organism

Daucus carota subsp. sativus

Product

DNA repair endonuclease UVH1, transcript variant X2

Transcript_id

XM_017374610.1

Type

mRNA

Unique Name

XM_017374610.1

Sequence Residues

TTAAAAAATATGGTCCAGTTTCACGAACACATCATCACGGACCTTCTAGA
AGACCCCGCCGGCGGCATGGTCATTCTCTCCGGCGGCCTCTCTCTCCACA
AACTCATCTCAAATCTCGTCTCTCTCCACCACACTTCCCAAGGCACTCTC
CTCATCCTCGCCTCCTCCCCTTCCCAGAGACAGTCCATCCTCCTCAACAC
CCCCAATCCCCCCGCCCCCGACAATCTCGCCGAAAATATCGGAGCCCGGG
CTCCGACAATCTCGGAGATCACTTCCGAGCTCCCGTCGAACCAGCGCGCG
TCGCTGTACACTTCAGGCGGCGTCGTTTTCGTGACCTCGAGGATATTAAT
TGTCGATCTGTTGTCGAATCGGTTGGAGCCGACGGTGATTGCTGGACTGA
TTATACTTAATGCGCATACGTTGTCTGCGACGTCGACGGAGGCGTTTATT
GTTCGGATTATGAGGACGGGGAATAAGAATTTGTATGTTAGGGCGTTTTC
GGATAATGCTCAGGCGATGGTTTCGGGTTTCTCGAAAGCCGAGAAGACGC
TGAAGTGCTTGTACTTGAGGAAATTGCATTTGTGGCCGAGGTTTCATGTG
TATGTGAAGCAGGATTTGGAGAAGGAGCCTCCGGAAGTTGTTGATGTTCG
GGTTCCGATGACTAACTACATGATGGAGATTCAGAAGGCATTGATCGAGG
TTATGGATGCGTGTTTGAAGGAAATGAGGAAGACTAATAAGGTTGATGTG
GAGGATTTGACGGTAGAGAGTGGATTGTGTAAGTCGTTTGATGAGATTCT
TAGGAGGCAGTTGGATCCGATTTGGCATACTTTGGGGAAAAAGACGAAGC
AACTTGTTTCGGATTTGAAGACGTTGAGGAAATTGTTGGATTATCTTGTT
AGGTATGATGCTGTGACCTATTTGAAGTATTTGGATTCCTTAAGAGCATC
CGAGAGTTTCCGGTCTGTATGGATATTTGCAGAGTCAAGTGTTAAGATTT
TTGAGTATGCGAAGAAGCGAGTTTACTATTGCAAGAGGTTGGAGGATGGG
AAAATAGTTGGACAGAGTAAGACCAAAACACCTAAAAAGAGAAAACTGCA
AGATAAGAACAAGGACAATGAAGATTCTTTACCAGCAAGTACAAATATTC
AAGTAGTTTTGGAGGAAGTTCTAGAGGAGGCACCAAAGTGGAAAGTCTTT
CTTGAAATCCTTGAAGAGATAAAGAATGATAGACTGAAACAAGCTTCGTC
GACGGAAGATTCCGTCACAGAAGAAATTGACGAGGGAACTATTTTAGTAG
CTTGCAAAGATGACCACTCATGTGTGCAGCTTGAAGAATGCCTTACCAAA
GGTCCCCGCAAGGTCATGCAAGATGAGTGGGAGAAATATTTGCTAAGCAA
AGTAGAACTGCAAAGTTTGCCAAAACACAACGGTAAGAAGAAATCGAAGG
AATCTAAAGGAATTGGGGTTCTTGATGGGACGATCCGAAAGATATCTGGA
AATAATACAGATGTCAGTAGCATTAGCAAGCAGGAAAATGATGCATTGCT
TGCAGCAGCCACTGATTTACGTAAACAGGTCAAAAAAGACAAGGACAGAG
ATAATTCTGAAATGTTGGAGGACAAAGCAGAACATCAAAAAGGAAAGAAG
AAAAGGGCCTCAAAAAATATGCCAACCACTTCAAATATCGATGATAAAAA
TAGTGCTGCAGCTGCAATGAATAAAAGATCAGATAAAGTTTCCTCTGAAA
GTCACAAGAGAACAGATCCAGAGGTTATTGGTGATGTCCATACAAGCATA
GTTAAGGATTTTTCTGCCGACAGAGGGATTATTTGGAAGCATATGCAAAG
TGTTGATACTGAGGGAACAACAGAGTCTAATCTACTCCCACCAGTGCTTT
TCTATGCCATTGATAGTGATAGTCATGTACTTGACATCTTGGAACCCTCT
GTAATCATTGTTTACCATCCTGATGTGGCTTTTGTCAGGGAAATTGAAAT
CTATAAATCTGAAAATCCTTCAAGTAAGTTGAGAGTATATTTTCTTTTTT
ACGATGATTCCACGGAGGTTCAGAAGTTTGAGGCTAGTAATCGCAGAGAA
CATTCAGCCTTTGAGTCGTTGATTAGGCAGAAATCTATGATGATGCTCCC
AGCTTATCAGGAAGGCAGTTTTTCGGGGTTTGATCCTCCCATTGAGCCAG
CGTCTGTAGCTTCCCAAAATTCAATAACCAGGAAGGCAGGTGGAAGAAAG
AAAATTGAAAAAGAAATGCAAGTCATAGTGGATATGAGGGAGTTCATGAG
TAACCTTCCAAATGTACTACATCAGAAGGGTATGCGTATTATTCCCGTGA
CATTGGAAGTTGGAGACTACATTCTTTCTCCATTAATATGTGTGGAGAGA
AAAAGTATACATGATCTTTTTGGTAGTTTCGCATCAGGGCGTCTCTTCCA
TCAAGCAGAAATGATGATTCGTTATTATCGGATGCCTGTTCTTTTAATCG
AGTTTTCGCAAGACAAAAGCTTCTCATTTCAGTCAGCTAGTGATATTGGC
GAGGATGTTGCACCAACCAGTATAATATCCAAGTTGTCCCTGCTGGCTCT
GCATTTTCCTCGTCTGCGTATTGTTTGGTCACGTAGTTTGCATGCCACAG
CTGAGATTTTTGCTTCACTCAAAGCAAATCAGGATGAACCTGATGAATCC
AAGGCACTTAGGGTTGGTGTACCCTCTGAAGATGGTATTATAGAAGATGA
TGTGAGAGCAGAGAATTATAACACATCAGCAGTGGAGTTCTTGAGAAGGC
TTCCCGGGGTTACAGATTCCAACTACAGGGCTTTAATGGACGGGTGTAAG
AGTTTGTCCGAACTTGCGACCCTTCCTGTAGAGAGATTAGCTGAGTTGAT
GGGTGGTCAAAAAGCTGCCAAAACGTTAAAGGACTTTCTTGATGCGAAGT
ATCCAACTTTACTCTAGGCTTACACGGATGCTTCATTCTTGGAAGATACA
TTTGCAAAATTTTAACATTGTCGTCCCTAAGATTTAATTTTTCTTGTTGG
AGAATTAGGTTAAGAATATGGCTTTCAACATTTTATTCATCATTTCATTT
GTATGATTTAATGTAACTTTAGCAAGAAAAATGGATATGTCAAAAGGAGT
TGATTGTTCAAATCAATGTCAATTACTCAAAAGTTTCTTTA

Sequence Length

3191

Sequence MD5 Checksum

fbe61a288edf76608fdd7d6f2b3e8048

Relationship

The XM_017374610.1 derives from mRNA XM_017374610.1
The mRNA XM_017374610.1 is a part of Gene LOC108204919
The XP_017230099.1 is a part of mRNA XM_017374610.1
The XM_017374610.1.exon10 is a part of mRNA XM_017374610.1
The XM_017374610.1.exon9 is a part of mRNA XM_017374610.1
The XM_017374610.1.exon8 is a part of mRNA XM_017374610.1
The XM_017374610.1.exon7 is a part of mRNA XM_017374610.1
The XM_017374610.1.exon6 is a part of mRNA XM_017374610.1
The XM_017374610.1.exon5 is a part of mRNA XM_017374610.1
The XM_017374610.1.exon4 is a part of mRNA XM_017374610.1
The XM_017374610.1.exon3 is a part of mRNA XM_017374610.1
The XM_017374610.1.exon2 is a part of mRNA XM_017374610.1
The XM_017374610.1.exon1 is a part of mRNA XM_017374610.1

Database Reference Annotations

Analysis

Is Analysis

False

Is Obsolete

False