MK000046 ZEP
Marker_type
CAPS
Name
MK000046 ZEP
Organism
Type
genetic_marker
Unique Name
MK000046_ZEP
Sequence Residues
AGGTGTGCAGAAAAATAGGAGACACGTGGCAACCAAATTTACACAATTGG
TGGAGGAGGACATTCACAAATTCTTGGCCATGGATTGGTGAACTACACTT
ATAATACACACTACCAAATCTATTGCAGCTTCATCAGTATCAAGAACCAA
TCAAGAAATAGAAAGAAATTTGAAGCTGGGTGTGTTTTGTAAGCATGGCT
TCAGCTGTGTTCTACACTTCAATGAACTCATCACCTGCACTTTTTTCAAG
AACCCATTTCCCAAATTCAATCTCAAAGGACTTTTCTGATGAATTCTTGA
ATACCCATCAAGTTAATTATTACTTGCCAGCAAGAAAGATTGGATCTTTG
AAGAGGGTTGCAAGTAAAGTTAGAGCTGCTGTGACTGATGCGCCTGTGGT
GAGTCAAAGTGGTGGGGAGAATTTGAGAGAGGGGAAGAAGAAGTTGAAGA
TTCTGGTGGCTGGAGGGGGGATTGGGGGCTTGGTTTTCGCCTTGGCGGCG
AGGAGGAAGGGGTTTGAAGTGGTGGTGTTTGAGAGGGATTTGACTGCTAT
TAGAGGTGAGGGGCAGTATAGGGGACCTATTCAGATACAAAGTAATGCTT
TGGCTGCTTTGGAAGCTATTGATTGGGATGTTGCTGATGAGGTTATGAAA
GCTGGTTGTATTACTGGTGACAGAATTAATGGATTGGTTGATGGTGTTTC
TGGCAATTGGTACTGCAAGTTTGATACGTTCACACCTGCAGCAGAACGGG
GCCTTCCAGTCACAAGAGTTGTAAGTCGCATGACGCTGCAAAAAATTCTG
GCCACCGCTGTTGGGGATGAAATTATATGTAATGGTAGTAATGTAGTGGA
CTTTGAGGATGATGGAAAGAAGGTTACTGTTATTCTGGAGGATGGACAGC
GCTGTGAAGGGGATCTTTTGGTTGGCGCTGATGGAATATGGTCAAAGGTA
CGGAGAAATTTGTTTGGATACACAGAGCCTACATATTCAGGTTACACTTG
TTATACAGGGATTGCAGATTTTGTGCCTGCGGATATTGATACGGTTGGGT
ACCGAGTATTTCTGGGCCACAAACAATACTTCGTTTCTTCAGATGTGGGT
GGGGGAAAGATGCAGTGGTATGCATTCTATAATGAACCTGCTGGTGGCAA
AGATAAAGAAAATGGTAAAAAGGAAAGGCTCCTTCAAATATTTGGTGGTT
GGTGCGATAATGTAATAGATTTGTTAATGGCTACCGACGAAGAAGCAATT
CTTCGTCGTGACATATATGACCGGGAACCAACTTTTAATTGGGGAAAGGG
TCGTATAACCTTGCTTGGGGACTCGGTTCATGCTATGCAGCCAAATCTAG
GTCAAGGGGGGTGCATGGCCATTGAGGACAGCTATCAACTAGCAATGGAG
CTTGATAAAGCATACAACCGAAGTGCTGAATCGGGAAATCCTATCGATAT
CGAATCTTCACTTAGGAGCTATGAAAGTTCTAGGAAAATACGTGTCTCGG
TTATTCATGGACTTGCTAGAATGGCTGCAATCATGGCCTCAACATATAAA
GCATATTTGGGTGTAGGACTTGGTCCATTGTCGTTCTTGACCAAGTTGAG
AATACCACATCCAGGGAGAGTTGGGGGAAGATTTTTTATTGACATCGGGA
TGCCATTGATGTTAAGTTGGGTACTAGGTGGCAATGGATCAAACCTTGAA
GGGAGACCATTACAGTGCAGGCTTTCTGACAGAGCAAACAGCGATTTGAA
AAGGTGGTTTGAAGATGACGATGCATTGGAGCGTGCTACAAAAGGAGAGT
GGGTTCTATTTCCTGTCGGGAATACATCTGCTTCTTCAGAAGCAATATTT
CTCAGCAAGGATGAAGGAAAACCTTGTATAGTCGGGAGCGTATTGCACCC
AAACATTCCAGGAACATCAATTGCCATACCTTCACCCCAGGTTTCCAGCT
TGCATGCTAAAATAACTTGTAAGAATGGTGCCTTTTCTGTTACTGATTTG
CGAAGTGAACATGGTACCTACTTAAGCGATAATGAAGGCAGACGGTATCG
GATTCCCCCTAATTTTCCTACTCGCTTTCATCCATCAGATATTATCGGAT
TTGGTTCAGATGAAAAGGTAGCTTTTCGGGTAAAGGTGATGAAGTTTCCG
TCCCAGGTTGCAGAGAACACAGAAGGAAGTGGAGCTCTCCAAGCAGTATG
AGATTTTTCGACTAGGCTTTAGATATTGCAAACACCAAATTGTATAGCAT
TCTCCACGACGCAGCGGATGCACAAAGCTGCTGTTTTGTACAATGTAGGA
CCAAAGGTATAGCATGCATGAAAGGACAGGATCCATAGCTTTGTTTGTGT
ATTGGCATTCCCATGTTTTGCTTTGATGCAGTGGGTTATACTTATACGAA
TTTATTTTTCAATGCAAACAAAGTTTGATGT
Sequence Length
2431
Sequence MD5 Checksum
07e65f3b700641b0acef6faf4adfbb12
Relationship
- The ZEP is an instance of Genetic Marker MK000046 ZEP
- The Genetic Marker MK000046 ZEP is adjacent to Primer ZEPdg1F
- The Genetic Marker MK000046 ZEP is adjacent to Primer ZEPdg2R
- The Genetic Marker MK000046 ZEP is located in Gene DCAR_025735
- The Genetic Marker MK000046 ZEP is located in Gene LOC108196307
Synonyms
- MK000046
- C003E10
Database Reference Annotations
Publication
- Just BJ, Santos CA, Fonseca ME, Boiteux LS, Oloizia BB, Simon PW. Carotenoid biosynthesis structural genes in carrot (Daucus carota): isolation, sequence-characterization, single nucleotide polymorphism (SNP) markers and genome mapping.. TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik. 2007 Feb; 114(4):693-704.
- Grzebelus D, Jagosz B, Simon PW. The DcMaster Transposon Display maps polymorphic insertion sites in the carrot (Daucus carota L.) genome.. Gene. 2007 Apr 01; 390(1-2):67-74.
- Brian James Just. Genetic mapping of carotenoid pathway structural genes and major gene QTLs for caroteniod accumulation in wild and domesticated carrot (Daucus Carota L.). Ph.D. Thesis. 2004. University of Wisconsin-Madison
- Cavagnaro PF, Chung SM, Manin S, Yildiz M, Ali A, Alessandro MS, Iorizzo M, Senalik DA, Simon PW. Microsatellite isolation and marker development in carrot - genomic distribution, linkage mapping, genetic diversity analysis and marker transferability across Apiaceae.. BMC genomics. 2011 Aug 01; 12:386.
Is Analysis
False
Is Obsolete
False