MK000035 CRTISO
Marker_type
STS-Sanger
Name
MK000035 CRTISO
Organism
Type
genetic_marker
Unique Name
MK000035_CRTISO
Sequence Residues
AACCATACACACAATCACCTTCCTCCCCAAAGCAAATTAATCTCTCCATC
TTTCTTGATTTAAGCACCCACAATTTGACACCCAGAAGCTAAATTCAAGA
ATTAGTATGTCTACTAGCATCTTTGAAACCCCATTACCAAGAAGTGATCT
TTTTTTATGTAGCAACAGTTTATTGTCTCAAAATTATAAACTTTTTGATA
ATTCCAGGAGTTTTGGGTTGAAAAGCCTCAGACCCAGATGTCAGAAAGAT
GGACTTTTGTATCCAAAGCCCTTGAATTTTGGGTTTTGTAGGGTGAGTAG
GAGAAAGAGGAAGCCTAATTTTGTGTTGAATTCTGTGCTGAGTGTTGATA
AAGAGTTGGAGAGTGATGAAACTGTGGGATTGGGTAGGAGTAGAGAGTAT
GATGCTATTGTGATTGGGTCTGGGATTGGTGGTTTGGTTGCAGCAACACA
GTTGGCTGTGAAGGGTGCTAAGGTTCTAGTGCTTGAAAAGTATTTGATTC
CTGGTGGGAGCTCTGGATATTACGAAAGAGATGGTTTTACATTCGATGTT
GGATCATCTGTGATGTTTGGCTTCAGTGATAAGGGGAATCTTAACTTGAT
AACTCAAGCATTGGCGGCAGTTGGCTGTAAGATGGAGGTGATACCTGACC
CCAGTACTGTCCATTTTCATCTACCTAGTAATCTTTCTGTCCTAGTACAT
AGAGAATATAATGAGTTCTTCTCCGAACTGACAAGCAAATTTCCACATGA
AAAGGAAGGAATATTTAAATTTTATGGTGAATGCTGGAAGATTTTTAATG
CCTTGAACTCATTGGAACTGAAGTCACTCGAGGAACCAATCTACCTGTTT
GGGCAGTTCTTTAAAAAGCCTATGGAATGCCTAACACTGGCATACTATTT
GCCTCAAAATGCTGGAGACATAGCTCGGAAGTTCATAAAAGATCCGGAGG
TTCTGTCCTTTATAGATGCTGAGTGCTTTATTGTGAGTACCGTTAATGCG
TTGAAGACACCAATGATCAACGCAAGCATGGTTCTGTGTGACAGACACTA
TGGGGGAATTAACTATCCTGTTGGTGGGGTTGGTGGGATCGCAAAATCAT
TAGCAAAAGGATTAGTCGACCAGGGAAGCGAAATACAATACAAAGCAAAT
GTTAAGAGCATTATAGTTGAAAATGGAAAAGCCGTAGGAGTTCGGCTGGC
GAATGGAAATGAGATATTTGCTAAGAACATAATTTCAAATGCTACCAGAT
GGGATACTTTTGGGAAGCTTCTAAAACAGGATGAATTACCTAAAGAAGAA
GAAAATTTTCAGAAACTTTACATAAAGGCCCCGTCATTTCTTTCTATTCA
CTTGGGAGTTAAATCTGATGTTTTGCCTCCAGATACGGATTGCCACCATT
TTGTGCTCGAGGATGATTGGTCAAATTTAGAGGTTCCATATGGTAGTATA
TTCCTGAGCATTCCGACTGTCCTTGATTCATCATTAGCTCCAGAAGGGAA
TCATATTCTTCACATATTTACAACTTCTTCCATAGAGGACTGGCAGGGGA
TGTCTCAAAAAGATTATGAGAAGAAGAAGGAGCTTGTAGCTGACGAGATT
ATAAGCCGACTGGAAAAGAAACTATTTCCTGGTCTCCAGTCTTCCATTGT
TTTAAAGGAGGTCGGGACACCTAAGACACACAGGCGCTACCTTGCTCGTG
ATAGTGGTACCTATGGACCTATGCCACAGGGTACCCCAAAGGGTTTACTA
GGAATGCCATTTAATACAACTGCAATTGACGGTTTGTACTGTGTGGGGGA
TAGTTGCTTTCCAGGACAAGGTGTTATAGCCGTTGCATTCTCAGGAGTGA
TGTGTGCTCATCGAGTTGCTGCTGATTTAGGGCTTGAGCAGAAATCTCCC
ATTTTGGATGCTGCTCTCCTTCGTCTACTGGGTTGGTTCAGGACACTAGC
ATAAAGAGTTCAATCATAAAATGTGACTTACATGAAGGGCAGAAGGTTGC
TTCTGATACGAGGTCATGTTCAATTTGATATTTAGTCTCTCTTCGAAAAA
TTCAATTGAGGTATCAAGGAACTAGGGGAAGTTTTATTCTTACCTATGTT
GAATAGTACGTGGCTTTTTTCCAATATATGTTTTGTTTTGGTGGTTCCCA
AGTGTGTGAACCACAAAACATTTTTTTCCTCATATATAACAAAGTCAACT
TGTGATGTTAAAATCTTGTGTCATATATGCATTCCGTCTACTGATATATA
TTTTTTAAATTCATGGATC
Sequence Length
2269
Sequence MD5 Checksum
05c3e7a4d5db58aeedf1c0914021a3bb
Relationship
- The CRTISO is an instance of Genetic Marker MK000035 CRTISO
- The Genetic Marker MK000035 CRTISO is adjacent to Primer CRTISO-5'UTRendF
- The Genetic Marker MK000035 CRTISO is adjacent to Primer CRTISO-5'CDSendR
- The Genetic Marker MK000035 CRTISO is located in Gene DCAR_013459
- The Genetic Marker MK000035 CRTISO is located in Gene LOC108219304
Synonyms
- MK000035
- C069N01
Database Reference Annotations
Publication
- Just BJ, Santos CA, Fonseca ME, Boiteux LS, Oloizia BB, Simon PW. Carotenoid biosynthesis structural genes in carrot (Daucus carota): isolation, sequence-characterization, single nucleotide polymorphism (SNP) markers and genome mapping.. TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik. 2007 Feb; 114(4):693-704.
- Grzebelus D, Jagosz B, Simon PW. The DcMaster Transposon Display maps polymorphic insertion sites in the carrot (Daucus carota L.) genome.. Gene. 2007 Apr 01; 390(1-2):67-74.
- Cavagnaro PF, Chung SM, Manin S, Yildiz M, Ali A, Alessandro MS, Iorizzo M, Senalik DA, Simon PW. Microsatellite isolation and marker development in carrot - genomic distribution, linkage mapping, genetic diversity analysis and marker transferability across Apiaceae.. BMC genomics. 2011 Aug 01; 12:386.
- Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Is Analysis
False
Is Obsolete
False