DCAR_004769 | CarrotOmics Tripal4

Cds

>DCAR_004769cds ATGAATCCAGCATCCTCAAACCCTAGAAATTATAATAACTCCTCCTCCAA TATCAGAAGAAGGTTCACCTACAGGTTTCTCCGAACCCTAAAACAAGTCA ACAGCATAACAGCTGGCAGATCATCATCCAGCTGGTCGAGTAGAAGAAGA AGATCCCTTGAGATCAAACATGCTGCTAATATGTGCATGGCCGCTACGGT GGGGGGAAGAAGGGCATGGAGCCGGGCCATGCTTTCCAAGATTCGCAGGC GAAGAAGAAGAAGGAGATGTTCCATAAATGAAACATGCTGGACAGGAGAG CTGAGGGAAATAGTTCCCGGAGGTGAAGATCTGGATACCAGGAGCTTACT GGACGAAACAGCCCATTACATCAAGTGCCTTACTACCCAGGTTCAGGTTA TGAACGATATTCTTCGTCTTTACTCCTCCTCCTCCTGA

Locus_tag

DCAR_004769

Name

DCAR_004769

Organism

Daucus carota subsp. sativus

Pep

>DCAR_004769pep MNPASSNPRNYNNSSSNIRRRFTYRFLRTLKQVNSITAGRSSSSWSSRRR RSLEIKHAANMCMAATVGGRRAWSRAMLSKIRRRRRRRRCSINETCWTGE LREIVPGGEDLDTRSLLDETAHYIKCLTTQVQVMNDILRLYSSSS*

Sequence Coordinates

DCARv2_Chr1:51101716..51103775+

Type

gene

Unique Name

DCAR_004769.gene

Sequence Residues

TTAATTGCAATACTTGACTATTATTCTTATTTTTTTGGAGAAACAAAAAA
GGAGAAATAGGAGCACCACATAAAGCAAGTGGGTAGCGGAAGCATGTGCG
ATCATATGGTGGTTGGGTCTTTCAAGCCCCACTTCTAGACCCTATAAATC
CACATTTCTTGAAAATGATAGATCCCAACATATATATACATACTGCTTAC
CATAATTTATTAATATGAAATTATCATAACCACTATTTAATTATCTTATC
TACATGATTAAAGAGGAGCTTGATGCTTAAGCCCCTCCACCATTTTCCCA
CCTCCCATATCTAATCCCTCTCTAGCAGCTCCTCTTTCTTTTTCATTTTT
ATTTCTTTTTACACCCCTTCATCCTATAATTTGAGTTGTTATTCACCACA
TATTTTATCTTTATAGAATATTATTCGCTTTCATTTCTTGTGGTAATTAT
TCTAAATAATATATTCCGCATAATACGAGGGGAAAACCCATTTTATGTGA
TGGCTAAACTATGTTATAGTGTATGATATTACGAAAAAACATTATAAATA
AACACACACGCATGTACAGATGTTGTGTCAGAAACGGAGAGAGGTGCAGT
GAATCCCTTTTGTCCTGGGAGTGTTTAAAGGCCCCCTTTGTGTCAGAAGA
AAATCTTTTATTCTTGTGTCAGAAACCCTAAATATGTATATATTGCTCCA
CAACTACATACACACATAATTAGCTAGCTAGGTTATACGCCACACCATGA
ATCCAGCATCCTCAAACCCTAGAAATTATAATAACTCCTCCTCCAATATC
AGAAGAAGGTTCACCTACAGGTTTCTCCGAACCCTAAAACAAGTCAACAG
CATAACAGCTGGCAGATCATCATCCAGCTGGTCGAGTAGAAGAAGAAGAT
CCCTTGAGATCAAACATGCTGCTAATATGTGCATGGCCGCTACGGTGGGG
GGAAGAAGGGCATGGAGCCGGGCCATGCTTTCCAAGATTCGCAGGCGAAG
AAGAAGAAGGAGATGTTCCATAAATGAAACATGCTGGACAGGAGAGCTGA
GGGAAATAGTTCCCGGAGGTGAAGATCTGGATACCAGGAGCTTACTGGAC
GAAACAGCCCATTACATCAAGTGCCTTACTACCCAGGTTCAGGTTATGAA
CGATATTCTTCGTCTTTACTCCTCCTCCTCCTGATCCATCTTCCTTCCTT
CCATCCACACTTATTCTATATACCCAACATATTTATGTATATATATATAT
ATTATTATTTATCTTCTTCTTCTCGTAATTAATTAAGTGGATACACATGA
GTCCCCAATGGAGCGTGACTGTAATAATAAATATATTATTATTATTATTA
ATGAAATATTGTTGATTATACTTCATTCAAGGGCGCCGGTGGAACAAGTT
AATCATGAATGTAAAAATCATATATATCTCCAAATAGTACACTGTTATGA
AGGTTGTATATATGTATATTGATCGGTGTTCGGAGTCGATGAATTACGAT
CAACGATATGGGCAGAAAATGTGAAGCCGTTATTGTGGGAAATGTTTACC
CTAGCTAATTTGGGTTTTATTTTTCATTACAATGGAATTTCCTATTGTAT
ATATACTATATGATGATTCCATATCTATCTCTACTTGTGCATAATTTTGA
TTTATATATCAAGGTTATCTGGTTTTTGCTTTTTTGAACAACAAGTAGTC
ACTCGTCTCCATAACTACTGCACTAGTAGCACTGTATCCGTGGTTTTGTT
TGTAGCTAGCTAGGACCTAGCTAGGTTGGTGTGAAAGCATATGCTTGCTT
GTTCGCTGGCAATTACACACAACGCGTCGTTGCTATCTATCTCGCCCGTT
GCTCAACAAGTTTGCTTTCGGATTATTCTTTTACTTTTGTTTTTCAAGAG
CTACCTCTCTCGTACGGTTTTGAGATATAAGTATTTAGTGATTCGTATTT
CACTATATCTGCCATGATACCTATTCCACTATTCTTTTTTGACAAAAAAT
ACAAGTTCGTCTGAAGAAAATTATATTTTCTTAAATGACCCTGATGAATG
AATATCGAG

Sequence Length

2059

Sequence MD5 Checksum

5c38a61cc98806ea6b65b1bdbad5791e

Relationship

The mRNA DCAR_004769 is a part of Gene DCAR_004769
The Genetic Marker MK002165 ESSR-060 is located in Gene DCAR_004769

Database Reference Annotations

GFF_source:.

Publication

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Analysis

Is Analysis

False

Is Obsolete

False