DCAR_000244 | CarrotOmics Tripal4

Cds

>DCAR_000244cds ATGGAGGCTTTGATCGAGCTCTGTGACTTGATTTCTCACAATCCTGTTAA ATTTGCGGACAAGCTTGCTTGGATTTGTGGCCGATGTCCTCCGCCTGATG CTTTTCGAGGTCAATCGCCTAGGGTTACACGGTCGCAGCTCAATGCTGTG CTTGCCCTGGCTTTGTTCCTTTCGAAATGTCCTAATCACCAAGACTCGCG TCCCAGGCTTCTTGTTGTTGAGTTTCTGAAGTCGATTACGGTGTCCTTTA ATTTGTCGTTTTGGCCACAGTCGTTTAATGCTGTGGCTGTTGGTTCCTTT TACAATGATTTCTTGAGTTATGTTTGTAAAGCAACCGATATGTCGTCTGA ATTAAGCAAAGACGTTGCAGGAGTTACGGGAGATATTTTGATCTCGGCAT ACAACACGAAAGATGGGGATATAGGGACTATAAAAGCTTTCTTGAATGCC TTGTCGAAAAACTTCCTTCCCATTCTTCCTTCTGATGTTGATAAGTTAGT TACTATACTAATGAATTCTTATGATAATACTTTCCCAAATTCTCCCAGAG ATTTCCCTGATGGCTCTCCCTCTCAGACCTCACCGCCTAGTTCCTCTTCT AGTGGTACAAATTCAGGGATAGTAGATACTACACCAAAGGGGTCGGGGGT GAATGGCAGCAGCAGTGCTTGGAAGAGTACTGTTGATCTGCTGGGTACTG CTGTTGGGTCCAACGAGGGAGAGCTAGCCTCTTCCCAAAAATTGATTGCC TCTTTCGAGAAGGAGTCTGTTGATAACCTTGAAAAACAAGAAACTGCCTT TAAATTAATTGGGCACATATTGGATAAATCCCAGATTGATCAAAAGCTTT TGGAACAAGTGAGACGTATTGCAAAAGAGCAAATTCAGTCAATGCTGGCT TTTCTAAAGATACAGAAGTTTGATTCTTCGGAGCCAAAGTCTTTGTTAAA AGTTAGAATCAATACAAAGCTCTCAGTTTACCAAGCTGCAGCTGCGTTAC AAATCAAGAGTCTCACATCTATTGATTCTGATGGAAAATCATCAAAGAGA TTATTGCATGGAACTCTTGCACTTTTGATAGAAGCTGCTGAAGCATGTTT ATACTCTGTATGGCGAAAATTAAGAGTTTGTGAAGAGCTTTTTGGTGCAA TTCTTGCTGGGATCTCTCAGATTGCTGTTACCCGCGGAGGTCAGCTGCTG CGTGTTCTTCTCATTCGCTTCAAACCCCTTGTTCTTACTATGTGTGCTCA GGCTGATACCCGGGGAAGCAACCATGGAGTCATGTTTGAGAGTGTTTTGA AGACAAGTTGTGAGATAATTGAATTCGGCTGGAGCAAGGACCGGTCACCA GTTGACACATTTATAATGGGTTTAGCTACAAGCATTCGTGAACGTAATGA TTATGAAGAAGAGGTTTGTTGTCTTCTATTGATTCTCAAGGCTAACACTA TAACTTGA

Locus_tag

DCAR_000244

Name

DCAR_000244

Organism

Daucus carota subsp. sativus

Pep

>DCAR_000244pep MEALIELCDLISHNPVKFADKLAWICGRCPPPDAFRGQSPRVTRSQLNAV LALALFLSKCPNHQDSRPRLLVVEFLKSITVSFNLSFWPQSFNAVAVGSF YNDFLSYVCKATDMSSELSKDVAGVTGDILISAYNTKDGDIGTIKAFLNA LSKNFLPILPSDVDKLVTILMNSYDNTFPNSPRDFPDGSPSQTSPPSSSS SGTNSGIVDTTPKGSGVNGSSSAWKSTVDLLGTAVGSNEGELASSQKLIA SFEKESVDNLEKQETAFKLIGHILDKSQIDQKLLEQVRRIAKEQIQSMLA FLKIQKFDSSEPKSLLKVRINTKLSVYQAAAALQIKSLTSIDSDGKSSKR LLHGTLALLIEAAEACLYSVWRKLRVCEELFGAILAGISQIAVTRGGQLL RVLLIRFKPLVLTMCAQADTRGSNHGVMFESVLKTSCEIIEFGWSKDRSP VDTFIMGLATSIRERNDYEEEVCCLLLILKANTIT*

Sequence Coordinates

DCARv2_C10705145:727..2393-

Type

gene

Unique Name

DCAR_000244.gene

Sequence Residues

ATGGAGGCTTTGATCGAGCTCTGTGACTTGATTTCTCACAATCCTGTTAA
ATTTGCGGACAAGCTTGCTTGGATTTGTGGCCGATGTCCTCCGCCTGATG
CTTTTCGAGGTCAATCGCCTAGGGTTACACGGTCGCAGCTCAATGCTGTG
CTTGCCCTGGCTTTGTTCCTTTCGAAATGTCCTAATCACCAAGACTCGCG
TCCCAGGCTTCTTGTTGTTGAGTTTCTGAAGTCGATTACGGTGTCCTTTA
ATTTGTCGTTTTGGCCACAGTCGTTTAATGCTGTGGCTGTTGGTTCCTTT
TACAATGATTTCTTGAGTTATGTTTGTAAAGCAACCGATATGTCGTCTGA
ATTAAGCAAAGACGTTGCAGGAGTTACGGGAGATATTTTGATCTCGGCAT
ACAACACGAAAGATGGGGATATAGGGACTATAAAAGCTTTCTTGAATGCC
TTGTCGAAAAACTTCCTTCCCATTCTTCCTTCTGATGTTGATAAGTTAGT
TACTATACTAATGAATTCTTATGATAATACTTTCCCAAATTCTCCCAGAG
ATTTCCCTGATGGCTCTCCCTCTCAGACCTCACCGCCTAGTTCCTCTTCT
AGTGGTACAAATTCAGGGATAGTAGATACTACACCAAAGGGGTCGGGGGT
GAATGGCAGCAGCAGTGCTTGGAAGAGTACTGTTGATCTGCTGGGTACTG
CTGTTGGGTCCAACGAGGGAGAGCTAGCCTCTTCCCAAAAATTGATTGCC
TCTTTCGAGAAGGAGTCTGTTGATAACCTTGAAAAACAAGAAACTGCCTT
TAAATTAATTGGGCACATATTGGATAAATCCCAGATTGATCAAAAGCTTT
TGGAACAAGTGAGACGTATTGCAAAAGAGCAAATTCAGTCAATGCTGGCT
TTTCTAAAGGTAAATATTTTTTTTCTCTCTGTTATTTTTTTCCTTTTACA
ATTTTAGTATCTTGTCATTAGAATTGTTGTTATTAGTAGAAACCAACATC
TATACTTTATAAACTCTGTGCAGATACAGAAGTTTGATTCTTCGGAGCCA
AAGTCTTTGTTAAAAGTTAGAATCAATACAAAGCTCTCAGTTTACCAAGC
TGCAGCTGCGTTACAAATCAAGAGTCTCACATCTATTGATTCTGATGGAA
AATCATCAAAGAGATTATTGCATGGAACTCTTGCACTTTTGATAGAAGCT
GCTGAAGCATGTTTATACTCTGTATGGCGAAAATTAAGAGTTTGTGAAGA
GCTTTTTGGTGCAATTCTTGCTGGGATCTCTCAGATTGCTGTTACCCGCG
GAGGTCAGCTGCTGCGTGTTCTTCTCATTCGCTTCAAACCCCTTGTTCTT
ACTATGTGTGCTCAGGTAAAGTTCTTGGTTAAGCTGAGGTTATTGGTCAT
CTTCTGTAGTCAGCTCACATATGTGATAATCCGTGTTCTTTGTGCATATG
CTCATGCAGGCTGATACCCGGGGAAGCAACCATGGAGTCATGTTTGAGAG
TGTTTTGAAGACAAGTTGTGAGATAATTGAATTCGGCTGGAGCAAGGACC
GGTCACCAGTTGACACATTTATAATGGGTTTAGCTACAAGCATTCGTGAA
CGTAATGATTATGAAGAAGAGGTTTGTTGTCTTCTATTGATTCTCAAGGC
TAACACTATAACTTGA

Sequence Length

1666

Sequence MD5 Checksum

33a4a271b615c256e46ee9657147aba6

Relationship

The mRNA DCAR_000244 is a part of Gene DCAR_000244

Database Reference Annotations

GFF_source:.

Publication

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Analysis

Is Analysis

False

Is Obsolete

False