DCAR_032388 | CarrotOmics Tripal4

Cds

>DCAR_032388cds ATGGAAGCTCAGCAGAACAATGTCCATGATCAAGATGGCAACAACAACAA CAACATGAAAGCCCCCAGCTTTCTGTGCAGGCAAACCAGCACAAGATGGA CACCCACCAGTGATCAGATAAGAATCTTGAAAGAGCTCTACTATAACAAT GGAATTAGGTCACCTTCTGCTGATCAGATCCAACGGATCTCGGCTCGTCT CCGGCAGTATGGGAAGATAGAAGGGAAGAATGTGTTCTACTGGTTCCAGA ACCACAAAGCCCGCGAACGCCAGAAGAAGAGGTTCACTACTAGCACCGCC AATGATCATTTCATGAATATCTCATCAGCCCCCACAGCAGCACAACCGCC CAGCAGCTTCCACCGAAACATCAACACGCTGAATCCTGGCCACTGGAGAT CCACCGAAGATCATTCCATTCTCTACAACACTCCCTACCCTCCCTCTTAC ATCACTCATCACTCCCCTGGGATGATTCCGTCTTCTTCTCATGCACCGCC GTTTGCTGCAGTTGGTCATCACATGGCAAGCTATGGCTACGGATCCATGG CTATGGAGCAAAGTTTTAGGGAATGTTCAATATCACCAAAAGACGAAGAC AGCAGTGGAATCTCCAACAACATCTGTCCCTACCCATTTCTTGAGATGAT CAACTCAACCCTAGACGAAGAAGAAGACGAGGACGGCGGAGATGAGTCCA GGGAGATGGCCACTCTTCCTCTTTTCCCCATGCATGGCGAGGAGGAGTAC AATTTCACATCATCCAGCAGGGGTCACTTCTATGGTGGCTGGTATCCTTC TGATAGCTTTGCTGGTAGTTCAGCCAGGGCTTCCCTCGAGTTGAGCCTCA ACTCCGGAGGAACTAGCTAA

Locus_tag

DCAR_032388

Name

DCAR_032388

Organism

Daucus carota subsp. sativus

Pep

>DCAR_032388pep MEAQQNNVHDQDGNNNNNMKAPSFLCRQTSTRWTPTSDQIRILKELYYNN GIRSPSADQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTTSTA NDHFMNISSAPTAAQPPSSFHRNINTLNPGHWRSTEDHSILYNTPYPPSY ITHHSPGMIPSSSHAPPFAAVGHHMASYGYGSMAMEQSFRECSISPKDED SSGISNNICPYPFLEMINSTLDEEEDEDGGDESREMATLPLFPMHGEEEY NFTSSSRGHFYGGWYPSDSFAGSSARASLELSLNSGGTS*

Sequence Coordinates

DCARv2_S891:110451..112050-

Type

gene

Unique Name

DCAR_032388.gene

Sequence Residues

GCCTTTTAATCCAAGCAAGGTGATACAATCGGTATTGTTTAAAGTCCCCG
TTTTGTCCCTCACTTTATAATTATTAGCATCACGTACGAGCAAAAAAAGA
AAGAAAAAAAAAAAATGTGTGTGTCAACCTCAATAGTCCTTCTCTCCCAG
ATATCCTTATGATATCCTTCTCTGCACCTCTCAATCTCACTTGCTTCAAT
TCCTCTCCCACTCCATGTGCATTAATCCCCTCTTTATATACCCTTCTATC
TTCACCACATTCCTCAACCAATCAATCTCTCTCTCTCTCTCTCTCTCTCT
CAGTTGCTAATCATCACTTTGTTTCTCTCAAACTCACCAGCCACAAAAAT
ATTCAGTCATGGAAGCTCAGCAGAACAATGTCCATGATCAAGATGGCAAC
AACAACAACAACATGAAAGCCCCCAGCTTTCTGTGCAGGCAAACCAGCAC
AAGATGGACACCCACCAGTGATCAGATAAGAATCTTGAAAGAGCTCTACT
ATAACAATGGAATTAGGTCACCTTCTGCTGATCAGATCCAACGGATCTCG
GCTCGTCTCCGGCAGTATGGGAAGATAGAAGGGAAGAATGTGTTCTACTG
GTTCCAGAACCACAAAGCCCGCGAACGCCAGAAGAAGAGGTTCACTACTA
GCACCGCCAATGATCATTTCATGAATATCTCATCAGCCCCCACAGCAGCA
CAACCGCCCAGCAGCTTCCACCGAAACATCAACACGCTGAATCCTGGCCA
CTGGAGATCCACCGAAGATCATTCCATTCTCTACAACACTCCCTACCCTC
CCTCTTACATCACTCATCACTCCCCTGGTAAAATAAATACCTAGCTAGCT
ATTTCATTTTGTCGATTAGGGTTTCGAAGATTCGGTTTGTAACTTGATTT
GTGGCGTGCAGGGATGATTCCGTCTTCTTCTCATGCACCGCCGTTTGCTG
CAGTTGGTCATCACATGGCAAGCTATGGCTACGGATCCATGGCTATGGAG
CAAAGTTTTAGGGTATTTACCTGTTTCCTTTTTGCTAATTGATTACGCAC
ATACACCCGGGAGTTGAACTCCTGACCTCCTGCGAGGGGCGGAAAAACTC
AACCACCGCACCAACAATTTGTTGCCGGTATTTACCAGTTTATACATATA
TATAAACATAGACTGCGTTGTTGTGATCAAACTAACTGCGTGCAGGAATG
TTCAATATCACCAAAAGACGAAGACAGCAGTGGAATCTCCAACAACATCT
GTCCCTACCCATTTCTTGAGATGATCAACTCAACCCTAGACGAAGAAGAA
GACGAGGACGGCGGAGATGAGTCCAGGGAGATGGCCACTCTTCCTCTTTT
CCCCATGCATGGCGAGGAGGAGTACAATTTCACATCATCCAGCAGGGGTC
ACTTCTATGGTGGCTGGTATCCTTCTGATAGCTTTGCTGGTAGTTCAGCC
AGGGCTTCCCTCGAGTTGAGCCTCAACTCCGGAGGAACTAGCTAATCTGC
CCATCACTATTAATCAAATATGTAAGATATGATTAAGCTACCTACTAATT
AAGTGTATGTGTACGGATGGGAGCTACTAATTAAGTATTAGAAATTAAC

Sequence Length

1599

Sequence MD5 Checksum

39f14af8f7ec69ad3826b566e2958531

Relationship

The mRNA DCAR_032388 is a part of Gene DCAR_032388
The Genetic Marker MK016719 SSR0349 is located in Gene DCAR_032388

Database Reference Annotations

GFF_source:.

Publication

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Analysis

Is Analysis

False

Is Obsolete

False