Daucus carota vT2T Genome; Chromosome level assembly

Chromosome_count_all
9
Name
Daucus carota vT2T Genome; Chromosome level assembly
Type
genome assembly
Description

In this study, we assembled a 430.40 Mb high-quality gapless genome to the telomere-to-telomere (T2T) level of ‘Kurodagosun’ carrot. In total, 36,268 genes were identified and 34,961 of them were functionally annotated. The proportion of repeat sequences in the genome was 55.3 %, mainly long terminal repeats (LTRs). Depending on the coverage of the repeats, 14 telomeres and 9 centromeric regions on the chromosomes were predicted.

Sequencing technology Oxford Nanopore PromethION; DNBSEQ-T7; PacBio.

This genome is available in the CarrotOmics Blast Search

Program, Pipeline, Workflow or Method Name
nextDenovo; NECAT; Flye; hifiasm
Program Version
v2.5.0; v20200119; v2.9-b1768; v0.16.1
Data Source Name
ASM3012742v1
Data Source Version
1
Biological Sample
SAMN34574545
Germplasm
Kurodagosun inbred line.