DCAR_021105 | CarrotOmics Tripal4

Cds

>DCAR_021105cds ATGAACAAAGATCGCCCTGAGCCGCTTGATTTCTTCATCTGGACTGTTGA GGATGTAGGCTTGTGGTTGGAGCAGGTAAATCTTGGCAGCTACCGTCGAA TTTTCATGGAAAATGGTGTCAACGGAGAATATTTGGAAGTGGCTTGCTTG AAGGGGGAGCAAAGAGTGCGCCGCCCTTGGTGGGCTCCTCCTTGTTTCTC AATAGTATTCACTAAAGCTGCGAAGCGCAACAGGCAGGCAAGAGTAGTCT CCTTGAAGCTGGAAGCTTGA

Locus_tag

DCAR_021105

Name

DCAR_021105

Organism

Daucus carota subsp. sativus

Pep

>DCAR_021105pep MNKDRPEPLDFFIWTVEDVGLWLEQVNLGSYRRIFMENGVNGEYLEVACL KGEQRVRRPWWAPPCFSIVFTKAAKRNRQARVVSLKLEA*

Sequence Coordinates

DCARv2_Chr6:25845931..25847948+

Type

gene

Unique Name

DCAR_021105.gene

Sequence Residues

ATGAACAAAGATCGCCCTGAGCCGCTTGATTTCTTCATCTGGACTGTTGA
GGTACTTTTTTTTACTTCAAGTTTGTATCTTTTTGCTTTTAGATCTTATT
TCCACTTTACCCTTTTCGTGATTTTTCTGCTTTTGTTTATTCTTGTTTTA
CATGATATGTCAATTTTTCTGTATGCATATAATTATATGGCAAAGAGCTG
GTTAGTTTTTGCGAAATTGAGGTTAGGTGAAGCGAAATAGGATCATAGGT
TCTTGAAATAGGGAGCTTGTTTGGCCAATTGTGAGTTAGTTAAGAGGGTA
ATGTAGTCACATAATGTGAAATAGGATCAGAGGTTGTGTTGAAGTAGTGA
GCTTTATAGCTCGTTGTAAGTCAATGGTTGTTGCAGATAACCCTTGGGAT
GGTTTGTGTAAAAAATTTAAATTTTCGCCTTCTTTGGTGTTAATTACAAA
TTAGCAATCCAGGACTACAATATAGAGAGTATGTGATCACTGAGTTGGAC
TTCCTGTTATTTGCATACCTCTTTGTTTACCGTGTGTCTGCTTCTTGGAT
CAGGAAGGGACTTCTTGATACATATATGGTATACCGACATGATGAAGAGT
AGTTAGAGTGGGGAAATAAGAGTAAGCAGAAAAGGGTGAAGACTAAATGT
TAGGAGACAAATGGACAAATTAGGCTTACCTACTTGTTCTAACTGGTTGT
TTCATGAATTAGAAATCCTGCTAAAGTAAGAACAACGTGTCATATCTGTT
TGTAGGAACATTTGCTTACGTTTTTTGATATTGTGTTTCCTTCAAAGAAT
ACATTATTGCATAGAATTAGGACAGGGATGAAGAATAGTTTATCTCGCCC
TTACTTTTCTTACCGAGCTTACTTATACAAGTGCATAAACAAGTTTTTAG
TGATCATTAGAGTTGAATGTAAATTAGCATGTAAAATGCTGACTCTTCAA
GTTTTAATGTATAAGTAGACAAGAGGGTTATGTCATAAGATTCCATAATT
TATAGAGTACCATTGATCTCAGAACGAATAGGCAGAAACTCGTTTGTATA
GTTTGCTTGTTTGATCCAACTCAACAGTAAAATTAGCGTAACTATTGTTA
ATGCTTTATATTGTATCTAAATATTTCTGAGCAACTAATCTCTTAAAAAA
GCGTTTGCGCAAGAAAAGTAAATAACGCCTAAAATTGTTGTAACTATTGC
CGTACTGTATCTAAATATTTCTGAGCAACTAATCTCTTAAAAATATGGGT
GGCAAAAGAAGTAAATAACCACTAAATCTGTGGCTAAGAGCTATAAAGTA
GTGATCTATGAAGGTCAACTGAGTAATATAGGTTGACCTCAAGTGTGCAG
ATGACCTATATTTAGTCTTAAAGAGTGTACAAAGCAGCTCTTATAGCCTA
TAGGCCATATTATAGTGTGATAAGTAGCTGAGTATGTGTCTGCTTTTGAT
TTACCAGGATGTAGGCTTGTGGTTGGAGCAGGTAAATCTTGGCAGCTACC
GTCGAATTTTCATGGAAAATGGTGTCAACGGAGAATATTTGGAAGGTATG
TCGATGTTCACGACAGAACAAATACTTAGGTTTATAAGACAGTGCCACAT
GAAATGGGGGGACTTCATAACTCTTTGCAAGGAACTAAGGCGAATTAAAG
GTCTCTCTCTCTCTCTCACACACACACACACACACTCACACACACACACA
CACACACCAGAATCATACAATTTTTTTTAATAATGATAAGAAAAACATGC
CCCCTTCCTTCCTCGGACACACACACTCCAGGCATCAACGAATAATACAA
ATAAAGTAATAGGGATAAGAAATACAAGGAAAATCAATTGATAAATATGT
GTTTGTCAACTCTTGACTAGTAAATTTTGATATCAGTGGCTTGCTTGAAG
GGGGAGCAAAGAGTGCGCCGCCCTTGGTGGGCTCCTCCTTGTTTCTCAAT
AGTATTCACTAAAGCTGCGAAGCGCAACAGGCAGGCAAGAGTAGTCTCCT
TGAAGCTGGAAGCTTGA

Sequence Length

2017

Sequence MD5 Checksum

91ca0548579ab2cb5fd2aeaf086720ee

Relationship

The mRNA DCAR_021105 is a part of Gene DCAR_021105
The Genetic Marker MK016713 SSR0288 is located in Gene DCAR_021105

Database Reference Annotations

GFF_source:.

Publication

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Analysis

Is Analysis

False

Is Obsolete

False