DCAR_021999 | CarrotOmics Tripal4

Cds

>DCAR_021999cds ATGAAAATGATGGTTCTTGATGGCTACAATGAGTCTGGTTCTTTTTGCTT GGATTCTCTGTATTGTGAAGAAGAAGAGGTGGGGATTGAGAGCTTAGTAG AAGAAGATGGGCTTGTTGGTGCTGAGGATCTTGAGCGAGATTTGTGTTGG GATGTTGAAGAGCTTGAGTCTTTGCTTTGTAAGGAGAAGGAGACTCATCT GTTCTGTAATGAGAATGGGAAAGAAATAGAACGTGCTTGTGTGGCGAGGG GAGAGGTGGTTGACTGGATGATGAAAGTCAAGGCTCATTATGGATTTTCA GCTGTTACTGCTGTTTTGTCTATTAATTTCTTTGATAGATTTATGCTTTC CAGTGTTTGTTTTCAACAAGATAAGCCGTGGATGATCCACCTAGCTGCTG TGACATGTCTTTCTCTGGCTGCCAAAGTTGATGAAGTTCAGGTTCCTCTC CTCCTGGACCTCCAAGTGGAAGATTCAAAGTATGTTTTTGAGGCAAAAAC AATACAGAGAATGGAGCTACTGGTGATGTCTACACTTGAATGGAGGATGA ATCCAGTGACCCCACTCTCTTTTCTTGATCACATTACAAGAAGACTTGGT TTCAAAACTCATCTCCGGTGGGAGTTCTTCAGGAAATATTGGAGATCTGC ACGTTATTTACCATCTGCATTGGCCACATCAACAATGCTCCACATTATAC ATGAACTAGAGCCTTTGAATGCCATTGAATACCAAGATGAGGTTCTGAGT CTGCTCAAAACTACCAAGGAACAAATAAATGAATGTTACGGAGTGATAGT GAACATATCAAACACTTGTTGGACCAAAAATTATCACAAACGCAAGTACA ATGCAGCAAGTCCAAGTAGCCCAAGTGGGGTTATTGATGCATCATTCAGC TACTCTGATAGTTCAACTGATTCTTGGGATTCTGGATCATCATCAGTCTC TTCTTCACCTCATCATCAGCCATTCTTCAAGAAACTCAGGACTGGAGAAG ATAATAAAATGCAAATGCCCATTTCTTAA

Locus_tag

DCAR_021999

Name

DCAR_021999

Organism

Daucus carota subsp. sativus

Pep

>DCAR_021999pep MKMMVLDGYNESGSFCLDSLYCEEEEVGIESLVEEDGLVGAEDLERDLCW DVEELESLLCKEKETHLFCNENGKEIERACVARGEVVDWMMKVKAHYGFS AVTAVLSINFFDRFMLSSVCFQQDKPWMIHLAAVTCLSLAAKVDEVQVPL LLDLQVEDSKYVFEAKTIQRMELLVMSTLEWRMNPVTPLSFLDHITRRLG FKTHLRWEFFRKYWRSARYLPSALATSTMLHIIHELEPLNAIEYQDEVLS LLKTTKEQINECYGVIVNISNTCWTKNYHKRKYNAASPSSPSGVIDASFS YSDSSTDSWDSGSSSVSSSPHHQPFFKKLRTGEDNKMQMPIS*

Sequence Coordinates

DCARv2_Chr6:17680108..17681455+

Type

gene

Unique Name

DCAR_021999.gene

Sequence Residues

ATGAAAATGATGGTTCTTGATGGCTACAATGAGTCTGGTTCTTTTTGCTT
GGATTCTCTGTATTGTGAAGAAGAAGAGGTGGGGATTGAGAGCTTAGTAG
AAGAAGATGGGCTTGTTGGTGCTGAGGATCTTGAGCGAGATTTGTGTTGG
GATGTTGAAGAGCTTGAGTCTTTGCTTTGTAAGGAGAAGGAGACTCATCT
GTTCTGTAATGAGAATGGGAAAGAAATAGAACGTGCTTGTGTGGCGAGGG
GAGAGGTGGTTGACTGGATGATGAAAGTCAAGGCTCATTATGGATTTTCA
GCTGTTACTGCTGTTTTGTCTATTAATTTCTTTGATAGATTTATGCTTTC
CAGTGTTTGTTTTCAACAAGATAAGCCGTGGATGATCCACCTAGCTGCTG
TGACATGTCTTTCTCTGGCTGCCAAAGTTGATGAAGTTCAGGTTCCTCTC
CTCCTGGACCTCCAAGTAAGTCTTGTAGATTTTTTGAAATATTTGATTTT
CATGACTTGGTTTTGTCAAAATTGTGGTTTTTAAAGTTGGGTGTTTGTGT
TTCTTGATGTTAAATAGGTGGAAGATTCAAAGTATGTTTTTGAGGCAAAA
ACAATACAGAGAATGGAGCTACTGGTGATGTCTACACTTGAATGGAGGAT
GAATCCAGTGACCCCACTCTCTTTTCTTGATCACATTACAAGAAGACTTG
GTTTCAAAACTCATCTCCGGTGGGAGTTCTTCAGGAAATGTCAAGATCTC
ATCCTCTCTGTTGTTGCTGGTAAAATCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCGTGTAATCACAATTTACATACATTTTCTTGACATACA
CATATCAGATTGGAGATCTGCACGTTATTTACCATCTGCATTGGCCACAT
CAACAATGCTCCACATTATACATGAACTAGAGCCTTTGAATGCCATTGAA
TACCAAGATGAGGTTCTGAGTCTGCTCAAAACTACCAAGGTTTGCATTGA
CTACATTTTTCTTTTTCCACAACACATTTGTTCTGTAATTTAAGTGATGC
GGGTACTTTATACGGGACCCTATTTATTATGCACAGGAACAAATAAATGA
ATGTTACGGAGTGATAGTGAACATATCAAACACTTGTTGGACCAAAAATT
ATCACAAACGCAAGTACAATGCAGCAAGTCCAAGTAGCCCAAGTGGGGTT
ATTGATGCATCATTCAGCTACTCTGATAGTTCAACTGATTCTTGGGATTC
TGGATCATCATCAGTCTCTTCTTCACCTCATCATCAGCCATTCTTCAAGA
AACTCAGGACTGGAGAAGATAATAAAATGCAAATGCCCATTTCTTAA

Sequence Length

1347

Sequence MD5 Checksum

8ec3e8e7c413aaad54d99958028d903a

Relationship

The mRNA DCAR_021999 is a part of Gene DCAR_021999
The Genetic Marker MK016736 SSR0427 is located in Gene DCAR_021999

Database Reference Annotations

GFF_source:.

Publication

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Analysis

Is Analysis

False

Is Obsolete

False