DCAR_016533 | CarrotOmics Tripal4

Cds

>DCAR_016533cds ATGGAGGGTCGGGGTTTATTGTACTCTGCTGCTGCTGGATCAAGCTTAAA TGCTAATGCTTTGCTCCATAATCAGTTGCCCTTTTCTTTTCTTGATTCCA GATCTATGGTTAGTTTTAAGGATATAAGTGGAAGAATGCATTCGGAGAGA TCGTTCTTTCGGTCATTTGGTCAGGATGGTAATGAGGATGAAGACTTTGA TGAATACTTTCACCAACCTGAGAAGAAGAGGCGGCTTAAAGCTGACCAAA TCGAATTTCTAGAGAAAAGTTTCGAGGCTGACAACAAGCTTGAACCAGAA CGAAAGGTCAAACTTGCAAAAGACATTGGTTTGCAGCCTCGGCAGGTCGC AATATGGTTTCAGAACCGCCGAGCTCGCTGGAAGAATAAATCACTAGAAA GAGATTATGAAGTACTGCAGGATAGCTACAACAGTCTTAAAGCACAATAT GAAAACCTCGTCAAGGAGAAGGATAAGTTAAAAGATCAGGTTCTTGACCT AACAGACAAGCTCAAAGAAAAAGAGAAAGAATGTTTAGACGTTGTAAATA CCCAAACATTGTCCGAATCCCCACAACAAGAACGCGTTGGAATTGAGGTT TCCAAGGGTGAAGTATCAATTGAATCAATTTCAACCTACAAACAAGAGGA CAATCTCTCGGTCAAAAGTGACCTAGTCAATTCGGACAGCTCAAATTACA CTGATGGAGTTCGTTCCTCTCTTTTAGAGCCAGGCGATTCCTCAAACTTT TTTGATATGGACCAGTCAGATAGGTCTCAAGATGAAGAAGACAACTTAAG AAGGCTTCTGTTGCCTCCGCTAGCTTACATGTTTCCTATGATCGGAGACA TTAGTTCCCCGGACCTACCTGCCAGTACTTGTTCCTCTGGCTTACCAATT GAAGAAGAACCTTATGATTTCTGGGCTTACTAA

Locus_tag

DCAR_016533

Name

DCAR_016533

Organism

Daucus carota subsp. sativus

Pep

>DCAR_016533pep MEGRGLLYSAAAGSSLNANALLHNQLPFSFLDSRSMVSFKDISGRMHSER SFFRSFGQDGNEDEDFDEYFHQPEKKRRLKADQIEFLEKSFEADNKLEPE RKVKLAKDIGLQPRQVAIWFQNRRARWKNKSLERDYEVLQDSYNSLKAQY ENLVKEKDKLKDQVLDLTDKLKEKEKECLDVVNTQTLSESPQQERVGIEV SKGEVSIESISTYKQEDNLSVKSDLVNSDSSNYTDGVRSSLLEPGDSSNF FDMDQSDRSQDEEDNLRRLLLPPLAYMFPMIGDISSPDLPASTCSSGLPI EEEPYDFWAY*

Sequence Coordinates

DCARv2_Chr5:4477406..4479569-

Type

gene

Unique Name

DCAR_016533.gene

Sequence Residues

TTTGGAAACACAGAGTAAACGGAAGAAATGATAAGTAATTTATTATTTAT
AATCTATAGTACTGGTAGTATAATCCAGGTGGCAGCATATGACAGAGTGT
GAGGGAGACAGTGATGAGCTGGTGGGGACCCTGTCATGTTCCATTTCCCA
ACGCAAACCCTATCTGCCCACCCACTCTACTTGTACTCATAAGCATCCGA
CTCTTACTGTACTTTCTTTCTACTACAACTAACTCACATACATTTGACTC
TTCTCCCTCAGGACACCTCCCAACAAAAACACACACACACACACTTCTCC
TCCTGTAGTAATTTTGATGATGGAGTTGGGTGCTCGCAGGTGTTCCCATA
CTTCCCACATCACTGAAATCATCATCACCAGCTTCTTCCGTCATAAACTC
TAGATTCATCATCATCTTCTTCTTCTTCTTGGTTTTATTGTTTTGTATAT
TTTGTTTCAGCTTTCACTATGATAGATTGAAGTTTAGATATACAGAATCA
TACATATTGCTGATTTCAATGGAGGGTCGGGGTTTATTGTACTCTGCTGC
TGCTGGATCAAGCTTAAATGCTAATGCTTTGCTCCATAATCAGTTGCCCT
TTTCTTTTCTTGGTAATTTTTTCTCACCTTTTAAAAAAATAATAATAATT
GTGTTTGTGATTCAATCTTGATTGTTGTTCTGTATTTTCTTGGTTGTTAT
TGATTAATTGTTGTTCATGAGTCTGTAGTTTGTAGATCCATTAGCATCTA
TGTTGTTTATTGATAGTGTAATATAAAAAAACTTGATTATCTAGTGTTGC
TCTTTGATCTTTATGGATGATGTGCTTCTATGATTGATCTTATCTGATTT
CTAGTGTAAAGGTTTTATCTTTACAAGTTAATTCGAGTCAATTGAGGGGA
TTCAGCTTTACCCCTTTTCGTGTTAGTATTATGCCTCGTGTTTGTTAACA
AATAGCTGAAAAGAATAAGTGAAATTCTTGATTAAACTGCACATTAGTTC
ATGACATTTCTGTTTACAAGCCTCTTCGCATCGCAGCTTCAGAATGTAAA
ATATGAGTTATGGTGATTTGGATCATGTGATAATGTTGGTTGCTGCATTT
GTTCTCTGAATGATTGAGCAGAATCCTTATGTAAGTGTTCTGATGCTTTG
GTTCAGATTCCAGATCTATGGTTAGTTTTAAGGATATAAGTGGAAGAATG
CATTCGGAGAGATCGTTCTTTCGGTCATTTGGTCAGGATGGTAATGAGGA
TGAAGACTTTGATGAATACTTTCACCAACCTGAGAAGAAGAGGCGGCTTA
AAGCTGACCAAATCGAATTTCTAGAGAAAAGTTTCGAGGCTGACAACAAG
CTTGAACCAGAACGAAAGGTCAAACTTGCAAAAGACATTGGTTTGCAGCC
TCGGCAGGTCGCAATATGGTTTCAGAACCGCCGAGCTCGCTGGAAGAATA
AATCACTAGAAAGAGATTATGAAGTACTGCAGGATAGCTACAACAGTCTT
AAAGCACAATATGAAAACCTCGTCAAGGAGAAGGATAAGTTAAAAGATCA
GGTGAGACCATCTAGAATACGCTTTCCATATTATTTTCTGCTGTCCGGTC
CCCGATTTTGGGAAATTCTGATATGTATATACATGTAATAATTACTATTC
AGGTTCTTGACCTAACAGACAAGCTCAAAGAAAAAGAGAAAGAATGTTTA
GACGTTGTAAATACCCAAACATTGTCCGAATCCCCACAACAAGAACGCGT
TGGAATTGAGGTTTCCAAGGGTGAAGTATCAATTGAATCAATTTCAACCT
ACAAACAAGAGGACAATCTCTCGGTCAAAAGTGACCTAGTCAATTCGGAC
AGCTCAAATTACACTGATGGAGTTCGTTCCTCTCTTTTAGAGCCAGGCGA
TTCCTCAAACTTTTTTGATATGGACCAGTCAGATAGGTCTCAAGATGAAG
AAGACAACTTAAGAAGGCTTCTGTTGCCTCCGCTAGCTTACATGTTTCCT
ATGATCGGAGACATTAGTTCCCCGGACCTACCTGCCAGTACTTGTTCCTC
TGGCTTACCAATTGAAGAAGAACCTTATGATTTCTGGGCTTACTAAGCTG
TCATCAGTATTACTGTTTTAGTCTTCTGTTTGTTGGTTATAAGGTAAGCA
AATAAATCCATCA

Sequence Length

2163

Sequence MD5 Checksum

38a84cac24f02e527d949cea8b225338

Relationship

The mRNA DCAR_016533 is a part of Gene DCAR_016533
The Genetic Marker MK002157 ESSR-052 is located in Gene DCAR_016533

Database Reference Annotations

GFF_source:.

Publication

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Analysis

Is Analysis

False

Is Obsolete

False