DCAR_013459

Cds

>DCAR_013459cds ATGTCTACTAGCATCTTTGAAACCCCATTACCAAGAAGTGATCTTTTTTT ATGTAGCAACAGTTTAGTTTCTCAAAGTTTTAAACTTTTTGATAATTCCA GGAGTTTTGGGTTGAAAAGCCTAAGACCCAGATGTCAGAAAGATAGAATT TTGTATCCAAAGCCCTTGAATTTTGGGTTTTGTAGGGTGAGTAGGAGAAA GAGGAAGCCTACTTTTGTGTTGAATTCTGTGCTGAGTGTTGATAAAGAGT TGGAGAGTGATGAAAGTGTGGGATTGGGTAGGAGTAGAGAGTATGATGCT ATTGTGATTGGGTCTGGGATTGGTGGTTTGGTTGCAGCAACACAGTTGGC TGTGAAGGGTGCTAAGGTTCTAGTGCTTGAAAAGTATTTGATTCCTGGTG GGAGCTCTGGATATTACGAAAGAGATGGTTTTACATTCGATGTTGGATCA TCTGTGATGTTTGGCTTCAGTGATAAGGGGAATCTTAACTTGATAACTCA AGCATTGGCGGCAGTTGGCTGTAAGATGGAGGTGATACCTGACCCCAGTA CTGTCCATTTTCATCTACCTAGTAATCTTTCTGTCCTAGTACATAGAGAA TATAATGAGTTCTTCTCCGAACTGACAAGCAAATTTCCACATGAAAAGGA AGGAATATTTAAATTTTATGGTGAATGCTGGAAGATTTTTAATGCCTTGA ACTCATTGGAACTGAAGTCACTCGAGGAACCAATCTACCTGTTTGGGCAG TTCTTTAAAAAGCCTATGGAATGCCTAACACTGGCATACTATTTGCCTCA AAATGCTGGAGACATAGCTCGGAAGTTCATAAAAGATCCGGAGGTTCTGT CCTTTATAGATGCTGAGTGCTTTATTGTGAGTACCGTTAATGCGTTGAAG ACACCAATGATCAACGCAAGCATGGTTCTGTGTGACAGACACTATGGGGG AATTAACTATCCTGTTGGTGGGGTTGGTGGGATCGCAAAATCATTAGCAA AAGGATTAGTCGACCAGGGAAGCGAAATACAATACAAAGCAAATGTTAAG AGCATTATAGTTGAAAATGGAAAAGCCGTAGGAGTTCGGCTGGCGAATGG AAATGAGATATTTGCTAAGAACATAATTTCAAATGCTACCAGATGGGATA CTTTTGGGAAGCTTCTAAAACAGGATGAATTACCTAAAGAAGAAGAAAAT TTTCAGAAACTTTACATAAAGGCCCCGTCATTTCTTTCTATTCACTTGGG AGTTAAATCTGATGTTTTGCCTCCAGATACGGATTGCCACCATTTTGTGC TCGAGGATGATTGGTCAAATTTAGAGGTTCCATATGGTAGTATATTCCTG AGCATTCCGACTGTCCTTGATTCATCATTAGCTCCAGAAGGGAATCATAT TCTTCACATATTTACAACTTCTTCCATAGAGGACTGGCAGGGGATGTCTC AAAAAGATTATGAGAAGAAGAAGGAGCTTGTAGCTGACGAGATTATAAGC CGACTGGAAAAGAAACTATTTCCTGGTCTCCAGTCTTCCATTGTTTTAAA GGAGGTCGGGACACCTAAGACACACAGGCGCTACCTTGCTCGTGATAGTG GTACCTATGGACCTATGCCACAGGGTACCCCAAAGGGTTTACTAGGAATG CCATTTAATACAACTGCAATTGACGGTTTGTACTGTGTGGGGGATAGTTG CTTTCCAGGACAAGGTGTTATAGCCGTTGCATTCTCAGGAGTGATGTGTG CTCATCGAGTTGCTGCTGATTTAGGGCTTGAGCAGAAATCTCCCATTTTG GATGCTGCTCTCCTTCGTCTACTGGGTTGGTTCAGGACACTAGCATAA

Gene

CRTISO-1

Locus_tag

DCAR_013459

Name

DCAR_013459

Organism

Daucus carota subsp. sativus

Pep

>DCAR_013459pep MSTSIFETPLPRSDLFLCSNSLVSQSFKLFDNSRSFGLKSLRPRCQKDRI LYPKPLNFGFCRVSRRKRKPTFVLNSVLSVDKELESDESVGLGRSREYDA IVIGSGIGGLVAATQLAVKGAKVLVLEKYLIPGGSSGYYERDGFTFDVGS SVMFGFSDKGNLNLITQALAAVGCKMEVIPDPSTVHFHLPSNLSVLVHRE YNEFFSELTSKFPHEKEGIFKFYGECWKIFNALNSLELKSLEEPIYLFGQ FFKKPMECLTLAYYLPQNAGDIARKFIKDPEVLSFIDAECFIVSTVNALK TPMINASMVLCDRHYGGINYPVGGVGGIAKSLAKGLVDQGSEIQYKANVK SIIVENGKAVGVRLANGNEIFAKNIISNATRWDTFGKLLKQDELPKEEEN FQKLYIKAPSFLSIHLGVKSDVLPPDTDCHHFVLEDDWSNLEVPYGSIFL SIPTVLDSSLAPEGNHILHIFTTSSIEDWQGMSQKDYEKKKELVADEIIS RLEKKLFPGLQSSIVLKEVGTPKTHRRYLARDSGTYGPMPQGTPKGLLGM PFNTTAIDGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADLGLEQKSPIL DAALLRLLGWFRTLA*

Sequence Coordinates

DCARv2_Chr4:30016895..30022167-

Type

gene

Unique Name

DCAR_013459.gene

Sequence Residues

AATTATTGTCCATGTTCTATTTACTATCCTTTTTAGTAATTTGACTACAT
ATTTTAATCATTATAATTGTTAGATTGAATTGGATTCTTGCTTCTTGTGA
AATTCATCTGATTCAATCATTCATAAGTTTATAAATCTGTTTATCAGGGA
AAAAACCACAGACGATTGCATTGTTTTCGGATAATACAACAAGATAAAAC
GTGGATTCCAAATTTATTCCCCTTCACTAAAATATAAAAACTAACAGCAA
AACCAAATTTGAGCGGTGATGCCCAAACCGGTTGCAAGTGAATTTGATTA
TTTTTTTTATATTTTACACGCACACAAGGCACACACACATAAACCAATCT
TTTTTGTCTCATATACTTGACAGATGCTAGAATCCTGCTATCACATAATC
CATGGCATCTTTCTCTTCACTACCAAATACACCCCCATATAAACCATACA
CACACTCACCTTCCTCCCCAAAGCAAATTAATCTCTCCATCTTTCTTGAT
TTGGGCACCCACAATTCGACACCCAGAAGCTAAATTCAAGAATTAGTATG
TCTACTAGCATCTTTGAAACCCCATTACCAAGAAGTGATCTTTTTTTATG
TAGCAACAGTTTAGTTTCTCAAAGTTTTAAACTTTTTGATAATTCCAGGA
GTTTTGGGTTGAAAAGCCTAAGACCCAGATGTCAGAAAGATAGAATTTTG
TATCCAAAGCCCTTGAATTTTGGGTTTTGTAGGGTGAGTAGGAGAAAGAG
GAAGCCTACTTTTGTGTTGAATTCTGTGCTGAGTGTTGATAAAGAGTTGG
AGAGTGATGAAAGTGTGGGATTGGGTAGGAGTAGAGAGTATGATGCTATT
GTGATTGGGTCTGGGATTGGTGGTTTGGTTGCAGCAACACAGTTGGCTGT
GAAGGGTGCTAAGGTTCTAGTGCTTGAAAAGTATTTGATTCCTGGTGGGA
GCTCTGGATATTACGAAAGAGATGGTTTTACATTCGATGTTGGATCATCT
GTGATGTTTGGCTTCAGTGATAAGGTTAGCTACTGATTGGTTTTCGCCTT
TCGGTTATGAGAAATATGTGCAAATTAGTTTAATGTGGTTGTAAAGGATT
CTTATGGTATATTTATATTTATGATGACATAAAATTGGTTTTAAAATCGT
CTAGTCTAACTTTTAACTTCGCATCGATTGAAAAAATGTTCTGCCTAATA
TATATTGCTCTGAATTGGTTAATGTAGTTGATACTGTATAGTGATATTTG
GTAAGCACGTTCTTGTAATTACTAAGGGTGTCTGTATATGATGGTTTAAC
CTTCTTCTGCATTAAGTAGAGTTACTTGCCCAATGTTAGCAAGAATATCT
TTTGCTTAGAGTTGGAACATACAGACTTGCTCCAGTGCCTGTATCCTTGA
CTAGATCATACACGCTAAAAAGAGCTTTTAATGGTGACCACTGTTCACAT
TATAATTTAAGCATCAATACTGTATTGCTTTTTAGTTGGTTGTCAATTAT
GATTTCATTGTTTTTTTGAAATGATCGACATGCCTAACAACGCTGGATAC
AGTATTACATTATAACTACAAATAATCTCCTATGTAAGATGTAGTGTGAC
AAAGTTTTCAGACAATCTAGTAACTTGCTATTCGGCCTTGTCTAACGGTT
AAGTATCGAGTATTTGCCTCCATAACTCTATCTAGTTCTTTGGCAGGGGA
ATCTTAACTTGATAACTCAAGCATTGGCGGCAGTTGGCTGTAAGATGGAG
GTGATACCTGACCCCAGTACTGTCCATTTTCATCTACCTAGTAATCTTTC
TGTCCTAGTACATAGAGAATATAATGAGTTCTTCTCCGAACTGACAAGCA
AATTTCCACATGAAAAGGAAGGAATATTTAAATTTTATGGTGAATGCTGG
AAGGTTTGTTTTCCTTAAGGTGACTGCGATTGCTTAGAGTTCTTTATTAT
AGTAACTATGGCAGATGTTTAACAAACTCTATGTGTATGTTGTAGATTTT
TAATGCCTTGAACTCATTGGAACTGAAGTCACTCGAGGAACCAATCTACC
TGTTTGGGCAGTTCTTTAAAAAGCCTATGGAATGCCTAACACTGGGTAAT
TACTAGTGCATAAACTTCATGGAAATTCGAATAGCACCCGTATTACAGTC
AGTTTGTGACACGTTGATAGACTCAACAATATTTTGTAATGTAATGAGCA
ATATAATAGCTATTTACAATTGCCTGTCCCAGAAGCTTGATATTCTTTTG
CTTTACCTACCTAGTTCTTGATCTTCTTTTATATTGATGCCATGTTACGC
AACAATATTTGTGAACAGTCATGGTATCATGTTATTAAAATTATGAATCT
CTGTTTTATTTAGTGGCTGACATTTGTTTAAACTATTATTCCTTAAGTTG
CAAAGTATTTTGAAAACCAATCCGATAACATCAGGAGATACTATTTAACA
TGATATGCTATGCAGCATACTATTTGCCTCAAAATGCTGGAGACATAGCT
CGGAAGTTCATAAAAGATCCGGAGGTTCTGTCCTTTATAGATGCTGAGGT
AGGTCAGAGCTGTCCTCTCAAAGTTTATGACTCATCTTTGATGCTTTTAC
TGTTTTGGAATCTGCCTTGCAAAAATTTATCCGAGATTATAAAATAAATT
TATTGGTAATCATGCAGTGCTTTATTGTGAGTACCGTTAATGCGTTGAAG
ACACCAATGATCAACGCAAGCATGGTAACTTGTTTGTCTAGATTCGGTCG
CTTTTTTTTTCTTCCTATTATGAATCTCATATACTGCATATGGCAGGTTC
TGTGTGACAGACACTATGGGGGAATTAACTATCCTGTTGGTGGGGTTGGT
GGGATCGCAAAATCATTAGCAAAAGGATTAGTCGACCAGGGAAGCGAAAT
ACAATACAAAGCAAATGTTAAGAGCATTATAGTTGAAAATGGAAAAGCCG
TAAGTCCAAACTTAGTCTAGACTTGATAATACTGGAATTTGTATACCCGT
GATGTTTTGAAAGATAAATATAACCTCATGTTAGCAACCTTCATCTCATA
GGTAGGAGTTCGGCTGGCGAATGGAAATGAGATATTTGCTAAGAACATAA
TTTCAAATGCTACCAGATGGGATACTTTTGGTAAAACTGCAACTATTTGA
ACTATGAGTTTTGCTCTGTTGTATGGTGATGATTATAAACTAAGGTTTCT
CAACCTCTTTGAAAAATATTGCCTAATCATATAAATAATTACACTACAGG
GAAGCTTCTAAAACAGGATGAATTACCTAAAGAAGAAGAAAATTTTCAGA
AACTTTACATAAAGGCCCCGTCATTTCTTTCTATTCACTTGGGAGTTAAA
TCTGATGTTTTGCCTCCAGATACGGATTGCCACCATTTTGTGCTCGAGGT
ATATGGTTACTTCAACAACTCGGTCTTTGACTGTGTTGGGATCCTGCTCA
AGCATGCATGTCGATGATATATAGTCACTTTGTTTATTTTCCCTGAAATT
TGATAGGATGATTGGTCAAATTTAGAGGTTCCATATGGTAGTATATTCCT
GAGCATTCCGACTGTCCTTGATTCATCATTAGCTCCAGAAGGGAATCATA
TTCTTCACATATTTACAACTTCTTCCATAGAGGACTGGCAGGTATTTTAT
ATATGTTCATATCATATGCAACGGTTCATGTTATTTGTATTTGAATTCTT
TTCTAGAAATGGATTTTCATAATGTTTTTCAAATTAAGTAACATGGTCCT
GGTTTTCAATGTTATAGGGGATGTCTCAAAAAGATTATGAGAAGAAGAAG
GAGCTTGTAGCTGACGAGATTATAAGCCGACTGGAAAAGAAACTATTTCC
TGGTCTCCAGTCTTCCATTGTTTTAAAGGAGGTACTCTATGAGATTATTT
GTAGTGTGCTTGATGATATTTAGATGTGTCATTCTTAATGAGAATCAGTG
CTCTCTCTATCTCTCTCTTTTATTAAAAGGAACTGGTAATTTGTAATTTT
TGCATTTTGTATTATCATTCTCCGTAGATTAATCATGGTAAGCATTTTTT
GTGCACAATCTAAGAGTTTATAGATTAATAGGTAAGATTTGACAGTTAAC
AGTAACCATTACAGGTCGGGACACCTAAGACACACAGGCGCTACCTTGCT
CGTGATAGTGGTACCTATGGACCTATGCCACAGGGTACCCCAAAGGGTTT
ACTAGGAATGCCATTTAATACAACTGTAAGTTTGATCACCTTAAGGTGTC
TTTATTAAAAACTTTAGAGGATATTGAGTGAACTTTGTCTGATGGAAATT
GCAGGCAATTGACGGTTTGTACTGTGTGGGGGATAGTTGCTTTCCAGGAC
AAGGTGTTATAGCCGTTGCATTCTCAGGAGTGATGTGTGCTCATCGAGTT
GCTGCTGATTTAGGTTAGTATGATGTTGACCTTTCCCTNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGTTGACCTTAC
CCTACAATAAAATATTCTTGAAGTCTTTGCTTGAAGTTCTATGTTTTAGT
TTTAGAATAATCTGAATGCAGTTTGGTGTATAATTAGTTTCTTTTAAATG
ACTGAATCACCCTCATCAGTCAACTTTAGAATGAACTGAAAGTGTATGCC
ATTTAATTACCTACGTTTCCATCTGCCAGGGCTTGAGCAGAAATCTCCCA
TTTTGGATGCTGCTCTCCTTCGTCTACTGGGTTGGTTCAGGACACTAGCA
TAAAGAGTTCAATCATAAAATGTGACTTACATGAAGGGCAGAAGGTTGCT
TCTGATACGAGGTCATGTTCAATTTGATATTTAGTCTCTCTTCGAAAAAT
TCAATTGAGGTATCAAGGAACT

Sequence Length

5272

Sequence MD5 Checksum

5850e17d63072876cbcdc45ed6f4dccb

Relationship

The mRNA DCAR_013459 is a part of Gene DCAR_013459
The Genetic Marker MK000035 CRTISO is located in Gene DCAR_013459

Database Reference Annotations

GFF_source:.

Publication

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Analysis

Is Analysis

False

Is Obsolete

False