XM_017386985.1 | CarrotOmics Tripal4

Gbkey

mRNA

Gene

LOC108214789

Model_evidence

Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns

Name

XM_017386985.1

Organism

Daucus carota subsp. sativus

Product

synaptotagmin-2-like, transcript variant X1

Transcript_id

XM_017386985.1

Type

mRNA

Unique Name

XM_017386985.1

Sequence Residues

ACTCTACCGACGAGCCTACACTATTATTGCATGACTTATTCTACTTTGGT
GGATGCTTCAATGCACATATGTATGTATGTTAAAGAAACAGTTGAATATC
AGGTAGGATATTAATCTTCTTTAACATTTCAGTTGATTTTTCTCAAAGAT
CATATCTTTTACATCTTTGTCTAGCTGAGTATCTTCTGCGGACATCCAAG
TCTCGGGAACCTATTGTGTTGCATGCATCTTATTTTCCCGAGACCATACT
GTGTATGTTTGGTTTGGTTTTAAGCTTGGAATTTTGGAAGGAAATCAAAG
TTTCATTTTTCAGCTTGTAATGTTTTTCTTCCGGGTGTGAGAAAATTGTT
GTGGAGAATTCTGGTGATCTGATTGAAAAAAGAAGAAGAACAAATTAGCA
GAGAGATGGGTATTGTGACCAGTGTTATGGGAATTTTTGGGTTTGGACTG
GGAATCACAATTGGCCTTGTTATCGGCTATTATCTCTTCATCTATTTCCA
GCCTACTAATGTTGAGAATCCTACTGTTCCTAGTTTGGATGAGAAAGACT
CTAAAGCTTTAAAGATGTTGATCCAAGAGCTACCAGTTTGGATCAAATAT
CCAGACCATGACCGCGTTGATTGGCTAAATAAGTTCATCGAGACCATGTG
GCCTTATTTGGACAAGGCAATTTGCAAGACTGTTAAGACTATTGTACAGC
CCATTATTGCCGAACAAATTCCGAAGTATAAAATTGATTCAGTTCAGTTT
GAAGTTCTATCTTTAGGAAGCCTACCTCCTGTTCTAACAGGAATGAAAGT
TTATACCACTGCGGAAAAGGAATTGATAATGGAACCATCTCTGAAGTGGG
CAGGGAACCCAAATGTCCTCGTAGCAATAAAGGCGTTTGGGCTAAGAGCC
ACTGTTCAGGCGGTTGACTTGCAAGTATTTGCTTGTCCACGTGTTACCTT
GAAGCCATTAGTTCCAAACTTTCCTTGTTTTGCAAAAATCTTAGTCTCAC
TCATGGAGAAGCCTCATGTTGACTTTGGACTAAAATTGCTTGGAGCAGAT
GTAATGTCCATTCCAGGCTTGTATCGATTTGTCCAGGATCTTATCAAGGA
CCAGGTTGCAAATATGTATTTATGGCCAAAAGCACTTGAAGTGCAAATAA
TGGATCCTGCAAAGGCCGCCAAGAGACCTGTAGGCATTCTCCAAGTGAAG
GTTGTGAGGGCACTAAAGCTTAAAAAGAAAGATTTTTTGGGTGCTTCAGA
TCCTTATGTGAAATTAAAGCTTAGCGAAGACAAACTTCCATCGAAGAAAA
CAACAGTAAAACACAAAAACTTGAACCCTGAATGGAATGAAGAATTCCAT
GTAGTTGTCAAGGATCCTGAGTCTCAGGTTCTGGAGATTGTTGTGTATGA
CTGGGAGCAGGTTGGCACACATGACAAAATGGGTATGAATGTTGTCCCGA
TAAAGGATCTTTTGCCTGATGAATCCAAAGTTCTAACTCTTGATTTGCGG
AAAAACATGGACCCTGGGGATGTTCAAAATGAAAAACTACGTGGTCAGCT
TGTTGTTGAAGCAATTTACAAACCTTTCAAGGGTAGTGAGATTCCACTTG
ATACTGAGAATTCTGACGAGGTGCAAAAGGCTCCTGATGGAACACCTGCT
GGTGGTGGTTTGCTTGTAATTATTATTCACGAGGGTCAAAGTATTGAAGG
GAAAAACCACACGAATCCATCAGCTCGTCTATTATTCAGAGGAGAAGTTA
AAAAAACCAAGACAGTGAAGAAGAACCGGGATCCAAGATGGGACGAGGAG
TTCCAATTCATGCTGGAGGAGCCACCTACTAACGACAGGATTCATGTTGA
AGTTGTTAGTACTTCAAGCAGGATGAGTCTATATCCTAAGGAAACACTGG
GTTACGTAGACATATACCTGTCAGACGTGATAAAGAACAAGAGGATAAAC
GAGAGGTACCACCTCATTGATTCAAAAAATGGTATGATTCAGATCGAGAT
GCAATGGAGGACTTCATCCTGAGCTAAATGCGGAATTTGTACAGTAGAGC
CTGCATTTTTCAACAATTGAAATGTCTTTCAACTGAGCAGCATTGATCAA
TGTAAAATGGTTTTGCATAAATTTCAATTCAAACTGTATATTTTCTTAAG
CTAAATAGCAGACATTATTTACAGTCATTGTGTAAACTATTCTCTACAAT
CACTTTCTGATACAAAGCCTGTACAGCTTATTTGTTGAGAAATGTGTGGG
GTGAATTGTGGTAATACAGATTACAGAAACAAAATTTATAGCA

Sequence Length

2293

Sequence MD5 Checksum

9e401d439714d70a9ab0f207e37c4772

Relationship

The XM_017386985.1 derives from mRNA XM_017386985.1
The mRNA XM_017386985.1 is a part of Gene LOC108214789
The XP_017242474.1 is a part of mRNA XM_017386985.1
The XM_017386985.1.exon12 is a part of mRNA XM_017386985.1
The XM_017386985.1.exon11 is a part of mRNA XM_017386985.1
The XM_017386985.1.exon10 is a part of mRNA XM_017386985.1
The XM_017386985.1.exon9 is a part of mRNA XM_017386985.1
The XM_017386985.1.exon8 is a part of mRNA XM_017386985.1
The XM_017386985.1.exon7 is a part of mRNA XM_017386985.1
The XM_017386985.1.exon6 is a part of mRNA XM_017386985.1
The XM_017386985.1.exon5 is a part of mRNA XM_017386985.1
The XM_017386985.1.exon4 is a part of mRNA XM_017386985.1
The XM_017386985.1.exon3 is a part of mRNA XM_017386985.1
The XM_017386985.1.exon2 is a part of mRNA XM_017386985.1
The XM_017386985.1.exon1 is a part of mRNA XM_017386985.1

Database Reference Annotations

Analysis

Is Analysis

False

Is Obsolete

False