XM_017379335.1 | CarrotOmics Tripal4

Gbkey

mRNA

Gene

LOC108208800

Model_evidence

Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns

Name

XM_017379335.1

Organism

Daucus carota subsp. sativus

Product

protein SCAR3-like, transcript variant X4

Transcript_id

XM_017379335.1

Type

mRNA

Unique Name

XM_017379335.1

Sequence Residues

TCGTGCACGAAAAATTGAAGCTGCAGTTTCTCCTCTTGAAAAATCTATAT
TATCTCAGAGAAGCCACTTACACTTTGCTTACACAACTGTTGATTTGCAG
GTTCCCACTGGCATGCACATATTCAAAGTGAACGAAATCACTTCATATAT
AGTGACTTGCCAATTTTTGTTATGGATTTATACGGAAAATGTCGTAGACC
TCCACACCTGCATTTGCTAGACAAGTTTGACACTGGTGGCCCAGGATCTT
GCCTAAAGAAATTTTCAGATCCAGCCTTTTTTAGGAGAGAATCGGCTGGT
TTTGATGGAGCATATGCTGAAAATTTTTCAAGGCATAAGAAGGCTCGTAA
AAGAAAGAAGAAGAAGAGAACATGGGTTCCGGACGACGACGAACCGCAGA
GTGTTAATCATGGCACACCAACATCCAGTCACAGCGGCAGATTGCATTAC
GCTTCTCAGAACTTTCATTCTCCGTCTCAGACCGTCTCGACATATGATGC
TGCAAAACAATTTGAAATAGAAACTCATTTAATCCCTTCATATTCAAGAA
ATGCAGAACCTGAAGAGTATGTTTTTAATCCAAGTAACACTTCAAAGTTT
GACGGATGTGAACCTGAGGAAATCTCTTCTCGGTGGATGATGAATCATAG
TGATAACTTTGACACATTTTCTCTTGATGAGCAAACCAGAGTTGTAGCTA
ATGATGTTCAGGAACAAACTGGTGCAGCATCATCTTGTATTACTTGGGAT
GAAAAGATAGAAATAGTGGAACCTACAGGACCACAATATCATTTTAATGA
AAATGTGTATGGTCACCCTACGAATTCTGACCCAATTCTTTTAGAGGGGG
ATGCTTCTAATTTTGAAACTGAATGCTGCAGTAACAAAAGCCCACCAAAA
TCAGTCTGTGCTGCACATCAATTTGATGAGTATGAGAGTGACATAGACAT
TTACATGGATTCACGTAATACCATGGAGTCAGAATCTGAAACTGATTTAG
AATGTCAAACGAAGCGAGAAGTGGAGCAGTATTCAGATATGAACACCATA
GCAATCGATGAAAATCTAAATAGGATTAACCCTGAGTACATGGAAAGCAA
TTCTGCAAATGCTCCTACTCATGTTCCACCTCGTATCTCCACAGATGGTG
ATATTTCAGACAACCACCACCACTCATTTGTCCTTGAATCTAGCTCTGTC
CTAAGCAAAGAAATATCCACTGCTAAGCCCATTTCCGTAACCCCAGTATG
TAATGCACAGGTACAGTCTCGTGACACAGGCAAATCTTCAATTCTGGACA
GTCTGTCTTCTAGTGAGTTAATCGATAGTGATGATATGACTAGCTCCAAA
ACAGAAACTGCTGTCAGAAATTTGTCGTCCTTTGACTCGAATGAACTAGT
AATTCAGGCTTTAAACAGTGATAAAGTCTTAAGCAATGCATATGGGTCAC
AAGATTCTCCGTCACTGCCTTCTGTTACTGGAACAAACTTTTGGACAAAT
GGTGGACTACTGGGGCTTCAACCATCAAAACCCCCTGACTTCAGTACGCC
AGGTCCTATGAATCATGACTCCATGGGTCCAAGCCGAGGTAAAACTTTTG
AGGGCAATAAACTTGCACCAGAAACCGATATCTCTGAGGGTTTTAAAGTG
CCTAAACAGAAAAGTAGCTCTAAACACTGCATATCGCTCTATAATGATCA
GGAAGATAGTACCTCTGTCATGAAAACATCTTTGAGTTCTTCACAAACTC
ATTCAGAAAGTAAAAATCAACATACTGCCATTTGTCAGCATAATGATAGT
CAGTTCCAGAATCTACTTTTCTCTGAAGCCAGTATTATGATACCTGGAAC
TAAAAAACCGGATAATCTGAATTTTGAAGCTGCTAAATCTCTTGGATATA
TTGACAAGAATTCATCTCGGATTTTTGAATTAAGCAATGAAGTACTTGAT
AACAGTCAAGGTAAAGTATGTTTTTCTCTTGAGGACAATCCTCTCAACTC
TTTCACAAGTGGTATATCTGAAAGAAATAGTGTGCATCAAACATTTCAAA
CCTTCTCTGATAGGATCTTCACAGAGCAGTTTGGAACTAAATTTTCATTC
ATATCACCGTCATCTTCTCCACCGCTTGAACATATGAAGATATCTTTTCA
GCCTATAGATGGATTTGAGGTATCAAAGCTGAAACTGGATTTCCCTGGTG
GAAATGAGTCTCTAGAAGGTGGTAGAGATGTCTTTCCTTCTTTTCAACTA
GTCCCAGAAGTGTCTCTTTCATTGCTGGACATTAATTCAGACTCTGATGA
CACTTTTTGTGATTCAAATTCTCACGGGTCAGATGATTCTATCACTCATT
ACTCAGTGTCATATTTTGAAGAATGGGGAACAATAGAATATCCTAAATGC
GATGATAGTGATATGTCTGATGCTTTATGCATAAACTCAATAGAATCAGT
TTCAAGTAACTTGGATTTTGGGAGAATTGCTCCGGGAGTAATCACCAGCA
ATAGTGGACTTCCAAATCTATTTTATGAGAAAGTTATGGAACATTCAGAA
ACAGATCTTCCAAGTTTTGATACTTTAGATGATTCAATCAATGAGGAATT
ACAGAATGATTCTAAAGCAAAGATTGAACTGGATTCAGGACCACTTAAGG
ATTCCACACTGTCACCTACTCTCCCTCCAACAGAGTGCGGTATGAACGAA
AATCCAGATATGGCAACTGAGAACCAAGTTCCTTCTGTTAAAGCCCTAAA
ACATGAATTTGATCAGAAGCTTCAATTTTCCACAATCTCCCACCAACAGA
AAGTAGAACCATTTAATCATGGAAATATGGAGACAATTGGATGTACGAAA
AATAAAAAGCATCCAGATGGCCAGAAGCTCAATTTACAGAAGGATTCTAA
TCAGTCCCCAAACAGCAAGGTGACAGATGAAAACGAAGATTTCCTTCAAC
AGATTAGGTCAAAATCCCTTAGCCTTAGGCGCACAATAATCGAACGGCCT
AATCTTGGTCCGGGAGTGCCTACAAATGTTTCGGTCACTGCAATTTTGGA
AAAGGCAAATGCGATTCGCCAGGCTGTTGGAAGCGATGATGGGGAAGATA
ACGATAGTTGGAGTGAGTGAGCGAGCCAACATGATGTGTTGTAATTTAAA
GTTTATCGGTGATGCACTGATGCTCTGGTATATGTGTGAATAGTTACACC
TCTATATATTCATCTGTACTTATTTTGTAGGGTATATGTTGTATCGTTTT
CAGGTTTATTTTCTAAAATAGCATGACTTTATGTTGTAATAAGTTGGATC
AGACAGCTAGTTCCACTACATTGTAATTCCTAATTCTGCATGGTGCCTAA
AATAATAGATAGCACCTAGCTTCGCACTTATTGAATTCATCCCTTCTGCC
GTTGCAAGTTATACAATGACTAACAGAATTTAAAGTTTC

Sequence Length

3439

Sequence MD5 Checksum

2dc5729f6a43bf20dbfc9e951ec73a1e

Relationship

The XM_017379335.1 derives from mRNA XM_017379335.1
The mRNA XM_017379335.1 is a part of Gene LOC108208800
The XM_017379335.1.exon1 is a part of mRNA XM_017379335.1
The XM_017379335.1.exon2 is a part of mRNA XM_017379335.1
The XM_017379335.1.exon3 is a part of mRNA XM_017379335.1
The XM_017379335.1.exon4 is a part of mRNA XM_017379335.1
The XM_017379335.1.exon5 is a part of mRNA XM_017379335.1
The XM_017379335.1.exon6 is a part of mRNA XM_017379335.1
The XM_017379335.1.exon7 is a part of mRNA XM_017379335.1
The XM_017379335.1.exon8 is a part of mRNA XM_017379335.1
The XM_017379335.1.exon9 is a part of mRNA XM_017379335.1
The XP_017234824.1 is a part of mRNA XM_017379335.1

Database Reference Annotations

Analysis

Is Analysis

False

Is Obsolete

False