XM_017379334.1 | CarrotOmics Tripal4

Gbkey

mRNA

Gene

LOC108208800

Model_evidence

Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns

Name

XM_017379334.1

Organism

Daucus carota subsp. sativus

Product

protein SCAR3-like, transcript variant X3

Transcript_id

XM_017379334.1

Type

mRNA

Unique Name

XM_017379334.1

Sequence Residues

GTCACTTCTGTCTGCCTTTAAATGTCTTGCTATGTATACCTATAGTTACG
TACATAATTGTATCTCTATATAGCAGTTCAGCTGCTCCAATCTCCTCACC
TACTTCTCCGTATTAACTTTACAGTTTCTGGAGAGGGACTGTGATTGAAT
CTAGAGAGAGAAAGTGGGTGGCTCTAGAAAGAAAAAATGATTGATTCTAG
AGAGGGAAAGTAGGTGATTCGAGGGGGGGGGGGGGAGAGAGAGAGAGGGA
GAGAGGGGGAGAGAGAGAGAGATGCCACTAGTGAGAGTTGAGGTGAGGAA
TGAGTACACGTTAGGAATGAGGGAGGTGTATAAAGATGAAGATGACCCGA
AAGCACTGTTAGAGGGAGTAGTTGTTGCTGGACTTGTTGGCGTTTTACGA
CAATTAGGCGATCTCGCTGAATTCGCAGCAGATGTGTTTCATGGATTACA
AGAACAAGTGACGAATACATCATCCAGAAGTAATCAGTTAAAGATTCGTG
CACGAAAAATTGAAGCTGCAGTTTCTCCTCTTGAAAAATCTATATTATCT
CAGAGAAGCCACTTACACTTTGCTTACACAACTGGTTCCCACTGGCATGC
ACATATTCAAAGTGAACGAAATCACTTCATATATAGTGACTTGCCAATTT
TTGTTATGGATTTATACGGAAAATGTCGTAGACCTCCACACCTGCATTTG
CTAGACAAGTTTGACACTGGTGGCCCAGGATCTTGCCTAAAGAAATTTTC
AGATCCAGCCTTTTTTAGGAGAGAATCGGCTGGTTTTGATGGAGCATATG
CTGAAAATTTTTCAAGGCATAAGAAGGCTCGTAAAAGAAAGAAGAAGAGA
ACATGGGTTCCGGACGACGACGAACCGCAGAGTGTTAATCATGGCACACC
AACATCCAGTCACAGCGGCAGATTGCATTACGCTTCTCAGAACTTTCATT
CTCCGTCTCAGACCGTCTCGACATATGATGCTGCAAAACAATTTGAAATA
GAAACTCATTTAATCCCTTCATATTCAAGAAATGCAGAACCTGAAGAGTA
TGTTTTTAATCCAAGTAACACTTCAAAGTTTGACGGATGTGAACCTGAGG
AAATCTCTTCTCGGTGGATGATGAATCATAGTGATAACTTTGACACATTT
TCTCTTGATGAGCAAACCAGAGTTGTAGCTAATGATGTTCAGGAACAAAC
TGGTGCAGCATCATCTTGTATTACTTGGGATGAAAAGATAGAAATAGTGG
AACCTACAGGACCACAATATCATTTTAATGAAAATGTGTATGGTCACCCT
ACGAATTCTGACCCAATTCTTTTAGAGGGGGATGCTTCTAATTTTGAAAC
TGAATGCTGCAGTAACAAAAGCCCACCAAAATCAGTCTGTGCTGCACATC
AATTTGATGAGTATGAGAGTGACATAGACATTTACATGGATTCACGTAAT
ACCATGGAGTCAGAATCTGAAACTGATTTAGAATGTCAAACGAAGCGAGA
AGTGGAGCAGTATTCAGATATGAACACCATAGCAATCGATGAAAATCTAA
ATAGGATTAACCCTGAGTACATGGAAAGCAATTCTGCAAATGCTCCTACT
CATGTTCCACCTCGTATCTCCACAGATGGTGATATTTCAGACAACCACCA
CCACTCATTTGTCCTTGAATCTAGCTCTGTCCTAAGCAAAGAAATATCCA
CTGCTAAGCCCATTTCCGTAACCCCAGTATGTAATGCACAGGTACAGTCT
CGTGACACAGGCAAATCTTCAATTCTGGACAGTCTGTCTTCTAGTGAGTT
AATCGATAGTGATGATATGACTAGCTCCAAAACAGAAACTGCTGTCAGAA
ATTTGTCGTCCTTTGACTCGAATGAACTAGTAATTCAGGCTTTAAACAGT
GATAAAGTCTTAAGCAATGCATATGGGTCACAAGATTCTCCGTCACTGCC
TTCTGTTACTGGAACAAACTTTTGGACAAATGGTGGACTACTGGGGCTTC
AACCATCAAAACCCCCTGACTTCAGTACGCCAGGTCCTATGAATCATGAC
TCCATGGGTCCAAGCCGAGGTAAAACTTTTGAGGGCAATAAACTTGCACC
AGAAACCGATATCTCTGAGGGTTTTAAAGTGCCTAAACAGAAAAGTAGCT
CTAAACACTGCATATCGCTCTATAATGATCAGGAAGATAGTACCTCTGTC
ATGAAAACATCTTTGAGTTCTTCACAAACTCATTCAGAAAGTAAAAATCA
ACATACTGCCATTTGTCAGCATAATGATAGTCAGTTCCAGAATCTACTTT
TCTCTGAAGCCAGTATTATGATACCTGGAACTAAAAAACCGGATAATCTG
AATTTTGAAGCTGCTAAATCTCTTGGATATATTGACAAGAATTCATCTCG
GATTTTTGAATTAAGCAATGAAGTACTTGATAACAGTCAAGGTAAAGTAT
GTTTTTCTCTTGAGGACAATCCTCTCAACTCTTTCACAAGTGGTATATCT
GAAAGAAATAGTGTGCATCAAACATTTCAAACCTTCTCTGATAGGATCTT
CACAGAGCAGTTTGGAACTAAATTTTCATTCATATCACCGTCATCTTCTC
CACCGCTTGAACATATGAAGATATCTTTTCAGCCTATAGATGGATTTGAG
GTATCAAAGCTGAAACTGGATTTCCCTGGTGGAAATGAGTCTCTAGAAGG
TGGTAGAGATGTCTTTCCTTCTTTTCAACTAGTCCCAGAAGTGTCTCTTT
CATTGCTGGACATTAATTCAGACTCTGATGACACTTTTTGTGATTCAAAT
TCTCACGGGTCAGATGATTCTATCACTCATTACTCAGTGTCATATTTTGA
AGAATGGGGAACAATAGAATATCCTAAATGCGATGATAGTGATATGTCTG
ATGCTTTATGCATAAACTCAATAGAATCAGTTTCAAGTAACTTGGATTTT
GGGAGAATTGCTCCGGGAGTAATCACCAGCAATAGTGGACTTCCAAATCT
ATTTTATGAGAAAGTTATGGAACATTCAGAAACAGATCTTCCAAGTTTTG
ATACTTTAGATGATTCAATCAATGAGGAATTACAGAATGATTCTAAAGCA
AAGATTGAACTGGATTCAGGACCACTTAAGGATTCCACACTGTCACCTAC
TCTCCCTCCAACAGAGTGCGGTATGAACGAAAATCCAGATATGGCAACTG
AGAACCAAGTTCCTTCTGTTAAAGCCCTAAAACATGAATTTGATCAGAAG
CTTCAATTTTCCACAATCTCCCACCAACAGAAAGTAGAACCATTTAATCA
TGGAAATATGGAGACAATTGGATGTACGAAAAATAAAAAGCATCCAGATG
GCCAGAAGCTCAATTTACAGAAGGATTCTAATCAGTCCCCAAACAGCAAG
GTGACAGATGAAAACGAAGATTTCCTTCAACAGATTAGGTCAAAATCCCT
TAGCCTTAGGCGCACAATAATCGAACGGCCTAATCTTGGTCCGGGAGTGC
CTACAAATGTTTCGGTCACTGCAATTTTGGAAAAGGCAAATGCGATTCGC
CAGGCTGTTGGAAGCGATGATGGGGAAGATAACGATAGTTGGAGTGAGTG
AGCGAGCCAACATGATGTGTTGTAATTTAAAGTTTATCGGTGATGCACTG
ATGCTCTGGTATATGTGTGAATAGTTACACCTCTATATATTCATCTGTAC
TTATTTTGTAGGGTATATGTTGTATCGTTTTCAGGTTTATTTTCTAAAAT
AGCATGACTTTATGTTGTAATAAGTTGGATCAGACAGCTAGTTCCACTAC
ATTGTAATTCCTAATTCTGCATGGTGCCTAAAATAATAGATAGCACCTAG
CTTCGCACTTATTGAATTCATCCCTTCTGCCGTTGCAAGTTATACAATGA
CTAACAGAATTTAAAGTTTC

Sequence Length

3920

Sequence MD5 Checksum

5d0d19d3772f255eec84a8eb38646239

Relationship

The XM_017379334.1 derives from mRNA XM_017379334.1
The mRNA XM_017379334.1 is a part of Gene LOC108208800
The XM_017379334.1.exon1 is a part of mRNA XM_017379334.1
The XM_017379334.1.exon2 is a part of mRNA XM_017379334.1
The XM_017379334.1.exon3 is a part of mRNA XM_017379334.1
The XM_017379334.1.exon4 is a part of mRNA XM_017379334.1
The XM_017379334.1.exon5 is a part of mRNA XM_017379334.1
The XM_017379334.1.exon6 is a part of mRNA XM_017379334.1
The XM_017379334.1.exon7 is a part of mRNA XM_017379334.1
The XM_017379334.1.exon8 is a part of mRNA XM_017379334.1
The XM_017379334.1.exon9 is a part of mRNA XM_017379334.1
The XM_017379334.1.exon10 is a part of mRNA XM_017379334.1
The XP_017234823.1 is a part of mRNA XM_017379334.1

Database Reference Annotations

Analysis

Is Analysis

False

Is Obsolete

False