XM_017373990.1 | CarrotOmics Tripal4

Gbkey

mRNA

Gene

LOC108204509

Model_evidence

Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns

Name

XM_017373990.1

Organism

Daucus carota subsp. sativus

Product

polygalacturonase At1g48100

Transcript_id

XM_017373990.1

Type

mRNA

Unique Name

XM_017373990.1

Sequence Residues

TAGCCCAAGGCGTGACCACAATCGAAATACACACTATTATTGTATGGTGC
ACATAATATTGGAATAGACTTCAACCACCACATCTTACTATATATACATG
ACTTCACCAGCTGAGATATTGCATGCAATTGCAAGTACCTCTGCAAACTA
AACTTAAGTTACTTAACCAATTAAGTTGACCTTTTGCAACTTCCCTTGCC
CTCAGGACTCATAAAGCCTTATAGCATCTAAAAAATCCACATTTCATTTT
CTCTGATCACTGTCAAAAACTTCAGCTTCTTGTCTATTCAAATTATGGCA
TCTATGCGCTTAACACTGCTGCTTTTATTCTTCACACTCAATTTTGTGAT
GTTTCACAGCCAAGCTAGATATCATTATCATAAAAAGCGCAAGCATTCGC
CTCCAACGTCGCAAATTTCTCAGCCTCCGTCTGGTGCACCAGCAGCGGGA
GCACCAGGACCATCTAATCAGCCTCCGAAGGCTGATCCTAATGTAAATCC
TGGTGTTTTTGACGTCAGAAATTTTGGTGCTGTCGGAGATGGCATGACTG
ATGACACAGAGGCATTCAAGGCAGCTTGGGACGCCGCGTGCCAATTTGAA
TCCGGAGTTCTTCTTGTTCCTAAGAGTTACTCTTTTATGATTCAGTCCAC
AATTTTCACTGGCCCTTGTAAAGGTGGTCTTGTTTTCAAGGTTGATGGCA
CAGTAATGCCACCAGATGGACCTGAATTATGGCCATCAAAGAATAGCAAA
CATCAGTGGCTGGTCTTTTACAGACTCGACGAGATGTCGTTGCAAGGCGG
TGGTGAGATTAATGGAAGAGGCGAAAAATGGTGGAACCTCCCCTGCAAGC
CTCATAGGGGACCTAACGGAAGCACATTGCCAGGACCATGTGACAGCCCA
GTTGCTATCAGGTTCTTCATGAGCAACAATTTGACAGTGCAAGGACTTAA
AATCATCGACAGCCCTCAGTTCAACTTCAGATTTGATAAATGCACCAATG
TCCATGTCGAATCAATTCACATTACAGCTCCAGCTCTGAGTCCAAACACT
GATGGGATTCATATAGAAAACGCCAACAATGTCCGGATATATGATTCCAC
AATATCTAATGGGGACGACTGTGTATCAATTGGATCGGGATGTTATGATG
TAGACATAAGAAACATTACATGTGGACCTGGCCACGGAATTAGCATTGGG
AGTTTAGGCAACCACAATTCGCGAGCCTGTGTTTCAAACATCACGGTCAG
GGACTCGGTGATAAAGAACACAGACAACGGAGTTAGGATCAAGACATGGC
AAGGAGGTTCTGGCGCAGTATCTGGAATCACATTCGACAACCTTCACATG
GAAAATGTTAGAAATCCAATTATGATTGACCAATTCTATTGCCTCACCAA
AGACTGTAAAAACGGAAGCTCAGCTGTCCTCGTGTCCGACATTCAGTACT
CGGGTATCAAAGGAACCTATGATATCAGAAGCCCTCCTATGCATTTTGCC
TGCAGTGATTCAGTTCCATGCACAAATATAACACTTTCTGATGTGGAACT
CCTTCCTGCAAAAGGAGAGATGGTTCTTGATCCGTTTTGTTGGAATGCTT
ATGGAGATTTCGAAGCACTAACCATACCACCAGTGTCCTGTTTGTTGGCG
GGAAATCCTCGTTCAATCTTGGAAAATTCATTAGGCCTTTGCTAATTAAC
TACCTATATATTGTACAGATTTTGCATCAATGTGTTGATCATGTAATACT
TTTTCCTTTTTCAGATTAACCAATCATGATTTCCTGTAATGTATATGTAA
TCTGTGAAGAGGGATCTTATTATTAAACCCTTCACATCATTATGAGTGTG
ACTTACATATATAAATGAAAGCTTTCGGTTTTAATTATTAA

Sequence Length

1891

Sequence MD5 Checksum

481ecd5eef1359f626a2a3faa0daad4b

Relationship

The XM_017373990.1 derives from mRNA XM_017373990.1
The mRNA XM_017373990.1 is a part of Gene LOC108204509
The XP_017229479.1 is a part of mRNA XM_017373990.1
The XM_017373990.1.exon6 is a part of mRNA XM_017373990.1
The XM_017373990.1.exon5 is a part of mRNA XM_017373990.1
The XM_017373990.1.exon4 is a part of mRNA XM_017373990.1
The XM_017373990.1.exon3 is a part of mRNA XM_017373990.1
The XM_017373990.1.exon2 is a part of mRNA XM_017373990.1
The XM_017373990.1.exon1 is a part of mRNA XM_017373990.1

Database Reference Annotations

Analysis

Is Analysis

False

Is Obsolete

False