BGI Tandem Repeats Annotation

Name
BGI Tandem Repeats Annotation
Type
Analysis
Description

Tandem repeats were detected using Tandem Repeats Finder v4.07b.

The annotation file used for JBrowse can be downloaded from the link below.

Data from this analysis can be viewed in JBrowse here.

Software Name
Tandem Repeats Finder
Software Version
4.07b
Data Source Name
BGI
Relationship
The Analysis BGI Tandem Repeats Annotation is a part of Genome Assembly Carrot Genome Assembly DCARv2
Publication
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
File
File Type
DCARv2 BGI Tandem Repeats Annotation JBrowse GFF3 GFF3
Organism
Daucus carota subsp. sativus
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