Recent advance in carrot genomics

Keywords
  • carrots
  • chromosome mapping
  • databases
  • evolution
  • genetic variation
  • genomics
  • genotyping
  • microsatellite repeats
  • organelle genome
  • sequence analysis
  • single nucleotide polymorphism
Publication Dbxref
AGL:5775089
Title
Recent advance in carrot genomics
Publication Type
Journal Article
Series Name
Acta Horticulturae
Publication Year
2017
Issue
1153
Page Numbers
61-68
Publication Date
2017
Citation
Iorizzo M, Ellison S, Van Deynze A, Stoffel K, Ashrafi H, Iovene M, Cavagnaro P, Cheng S, Zheng P, Zheng Z, Senalik D, Spooner DM, Simon PW. Recent advance in carrot genomics. Acta Horticulturae. 2017; (1153)61-68.
Language Abbr
eng
Publication Model
[electronic resource].
Authors
Iorizzo M, Ellison S, Van Deynze A, Stoffel K, Ashrafi H, Iovene M, Cavagnaro P, Cheng S, Zheng P, Zheng Z, Senalik D, Spooner DM, Simon PW
Abstract
In recent years there has been an effort towards the development of genomic resources in carrot. The number of available sequences for carrot in public databases has increased recently. This has allowed the design of SSRs markers, COS markers and a high-throughput SNP assay for genotyping. Additional molecular tools include the first high-throughput DArT array and the full sequence of organelle genomes. These molecular resources have been successfully used to gain new insights into carrot genetic diversity, organelle genome evolution and to establish the first dense sequence-based linkage maps. Sequencing of the carrot genome is currently ongoing. Its release, will establish a solid framework for carrot genomic studies, opening a new challenging and exciting era for the carrot scientific community.
Relationship
The Publication Iorizzo M, Ellison S, Van Deynze A, Stoffel K, Ashrafi H, Iovene M, Cavagnaro P, Cheng S, Zheng P, Zheng Z, Senalik D, Spooner DM, Simon PW. Recent advance in carrot genomics. Acta Horticulturae. 2017; (1153)61-68. is a part of Publication Briard M. Ed.. International Symposium on Carrot and Other Apiaceae. Acta Horticulturae. 2017 Mar; 1153.
Database Reference Annotations
Is Obsolete
False