NCBI Assembly ASM1680105v1; Panax notoginseng isolate WSSQ-2019; chromosome level assembly
Full_ncbi_xml
24837498
GCA_016801055.1
GCA_016801055.1
16801055
ASM1680105v1
44586
Panax notoginseng (eudicots)
44586
Panax notoginseng
haploid
haploid
Chromosome
3
JADPQE01
PRJNA658419
658419
SAMN16425310
16425310
WSSQ-2019
106.79
false
24836848
Major
Major
2021/02/04 00:00
1/01/01 00:00
2021/02/04 00:00
2021/02/04 00:00
2021/02/04 00:00
2021/02/04 00:00
Capital Medical University
representative genome
full-genome-representation
has-chromosome
latest
latest_genbank
representative
wgs
GCA_016801055.1
1118014
216472261
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/016/801/055/GCA_016801055.1_ASM1680105v1
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/016/801/055/GCA_016801055.1_ASM1680105v1/GCA_016801055.1_ASM1680105v1_assembly_report.txt
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/016/801/055/GCA_016801055.1_ASM1680105v1/GCA_016801055.1_ASM1680105v1_assembly_stats.txt
2C3X9988819850168010559800
0 12 5523 557 1118014 0 12 219 12 0 207 6 216472261 2660677618 2660147218 ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/016/801/055/GCA_016801055.1_ASM1680105v1/GCA_016801055.1_ASM1680105v1_assembly_report.txt ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/016/801/055/GCA_016801055.1_ASM1680105v1 ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/016/801/055/GCA_016801055.1_ASM1680105v1/GCA_016801055.1_ASM1680105v1_assembly_stats.txt 3 Chromosome representative genome Capital Medical University ]]>
Name
NCBI Assembly ASM1680105v1; Panax notoginseng isolate WSSQ-2019; chromosome level assembly
Type
genome assembly
Description
We report a high-quality reference genome of Panax notoginseng, whose genome size up to 2.66Gb with a contig N50 of 1.12Mb using third-generation PacBio sequencing technology, and which is the first chromosome-level genome of genus Panax.
Program, Pipeline, Workflow or Method Name
Canu v. APR-2020
Program Version
Canu v. APR-2020
Data Source Name
SAMN16425310
Database Reference Annotations
Biological Sample
SAMN16425310
Organism