DCAR_009493 | CarrotOmics Tripal4

Cds

>DCAR_009493cds ATGAAAGTTTATACCACTGCGGAAAAGGAATTGATAATGGAACCATCTCT GAAGTGGGCAGGGAACCCAAATGTCCTCGTAGCAATAAAGGCGTTTGGGC TAAGAGCCACTGTTCAGGCGGTTGACTTGCAAGTATTTGCTTGTCCACGT GTTACCTTGAAGCCATTAGTTCCAAACTTTCCTTGTTTTGCAAAAATCTT AGTCTCACTCATGGAGAAGCCTCATGTTGACTTTGGACTAAAATTGCTTG GAGCAGATGTAATGTCCATTCCAGGCTTGTATCGATTTGTCCAGGATCTT ATCAAGGACCAGGTTGCAAATATGTATTTATGGCCAAAAGCACTTGAAGT GCAAATAATGGATCCTGCAAAGGCCGCCAAGAGACCTGTAGGCATTCTCC AAGTGAAGGTTGTGAGGGCACTAAAGCTTAAAAAGAAAGATTTTTTGGGT GCTTCAGATCCTTATGTGAAATTAAAGCTTAGCGAAGACAAACTTCCATC GAAGAAAACAACAGTAAAACACAAAAACTTGAACCCTGAATGGAATGAAG AATTCCATGTAGTTGTCAAGGATCCTGAGTCTCAGGTTCTGGAGATTGTT GTGTATGACTGGGAGCAGGTTGGCACACATGACAAAATGGGTATGAATGT TGTCCCGATAAAGGATCTTTTGCCTGATGAATCCAAAGTTCTAACTCTTG ATTTGCGGAAAAACATGGACCCTGGGGATGTTCAAAATGAAAAACTACGT GGTCAGCTTGTTGTTGAAGCAATTTACAAACCTTTCAAGGGTAGTGAGAT TCCACTTGATACTGAGAATTCTGACGAGGTGCAAAAGGCTCCTGATGGAA CACCTGCTGGTGGTGGTTTGCTTGTAATTATTATTCACGAGGGTCAAAGT ATTGAAGGGAAAAACCACACGAATCCATCAGCTCGTCTATTATTCAGAGG AGAAGTTAAAAAAACCAAGACAGTGAAGAAGAACCGGGATCCAAGATGGG ACGAGGAGTTCCAATTCATGCTGGAGGAGCCACCTACTAACGACAGGATT CATGTTGAAGTTGTTAGTACTTCAAGCAGGATGAGTCTATATCCTAAGGA AACACTGGGTTACGTAGACATATACCTGTCAGACGTGATAAAGAACAAGA GGATAAACGAGAGGTACCACCTCATTGATTCAAAAAATGGTATGATTCAG ATCGAGATGCAATGGAGGACTTCATCCTGA

Locus_tag

DCAR_009493

Name

DCAR_009493

Organism

Daucus carota subsp. sativus

Pep

>DCAR_009493pep MKVYTTAEKELIMEPSLKWAGNPNVLVAIKAFGLRATVQAVDLQVFACPR VTLKPLVPNFPCFAKILVSLMEKPHVDFGLKLLGADVMSIPGLYRFVQDL IKDQVANMYLWPKALEVQIMDPAKAAKRPVGILQVKVVRALKLKKKDFLG ASDPYVKLKLSEDKLPSKKTTVKHKNLNPEWNEEFHVVVKDPESQVLEIV VYDWEQVGTHDKMGMNVVPIKDLLPDESKVLTLDLRKNMDPGDVQNEKLR GQLVVEAIYKPFKGSEIPLDTENSDEVQKAPDGTPAGGGLLVIIIHEGQS IEGKNHTNPSARLLFRGEVKKTKTVKKNRDPRWDEEFQFMLEEPPTNDRI HVEVVSTSSRMSLYPKETLGYVDIYLSDVIKNKRINERYHLIDSKNGMIQ IEMQWRTSS*

Sequence Coordinates

DCARv2_Chr3:8029657..8031868-

Type

gene

Unique Name

DCAR_009493.gene

Sequence Residues

ATGAAAGTTTATACCACTGCGGAAAAGGAATTGATAATGGAACCATCTCT
GAAGTGGGCAGGGAACCCAAATGTCCTCGTAGCAATAAAGGCGTTTGGGC
TAAGAGCCACTGTTCAGGTATCGGAAAGCACACACACAGAAATTATACAT
TAGGACTCCTAATTTCTGTGAGTAATGTTGGTCTGGTGCATTTCAGGCGG
TTGACTTGCAAGTATTTGCTTGTCCACGTGTTACCTTGAAGCCATTAGTT
CCAAACTTTCCTTGTTTTGCAAAAATCTTAGTCTCACTCATGGAGAAGGT
AAAGGAAACTCTAAATATACTTCTGATTGAATTAAATTTACTTCCATGTG
AACTTCTGCTTCTCCAAGTTTTTCACTTTTAATCTGCAGCCTCATGTTGA
CTTTGGACTAAAATTGCTTGGAGCAGATGTAATGTCCATTCCAGGCTTGT
ATCGATTTGTCCAGGTACTATCATAAGGCTTATGTTGTCAAAATTCTTAT
TGTCTTTGGATAGACTTGTGTTTAACCTTCTTGAAGTTCAACAAAGTTGT
AGAAATTTTATGCTCCAGCAGCGCAGCAACTAATTTTTTACCTAATTATT
GTTTATTGTTTTTGTGACGTATAACTTCTCAAAATATTCCTCAACATTTG
TTCTGATTTCTCAATCCGTTCTTCCAGGATCTTATCAAGGACCAGGTTGC
AAATATGTATTTATGGCCAAAAGCACTTGAAGTGCAAATAATGGATCCTG
CAAAGTAAGTGCATACATTCTAGTCTTCGCCTCAGGCATCACCATGTCGT
TTGCTCAGACCAAATATATTTTGTTGCTGCCTACTGACAGGGCCGCCAAG
AGACCTGTAGGCATTCTCCAAGTGAAGGTTGTGAGGGCACTAAAGCTTAA
AAAGAAAGATTTTTTGGGTGCTTCAGATCCTTATGTGAAATTAAAGCTTA
GCGAAGACAAACTTCCATCGAAGAAAACAACAGTAAAACACAAAAACTTG
AACCCTGAATGGAATGAAGAATTCCATGTAGTTGTCAAGGATCCTGAGTC
TCAGGTTCTGGAGATTGTTGTGTATGACTGGGAGCAGGTAACAGTTTTTC
CTCTCATTTAAATGCTTCTTTTTGTGGAAGGCAAGCAAGTTTTGACAAAA
CACACACACACACACACACTGTCCTTGACGAGGTCAAGCCTTTAATTATC
ATTTGTGGACATTTTTCCGGGCTCAGGTTGGCACACATGACAAAATGGGT
ATGAATGTTGTCCCGATAAAGGATCTTTTGCCTGATGAATCCAAAGTTCT
AACTCTTGATTTGCGGAAAAACATGGACCCTGGGGATGTTCAAAATGAAA
AACTACGTGGTCAGCTTGTTGTTGAAGCAATTTACAAACCTTTCAAGGGT
AGTGAGATTCCACTTGATACTGAGAATTCTGACGAGGTGCAAAAGGCTCC
TGATGGAACACCTGCTGGTGGTGGTTTGCTTGTAATTATTATTCACGAGG
GTCAAAGTATTGAAGGGAAAAACCACACGAATCCATCAGCTCGTCTATTA
TTCAGAGGAGAAGTTAAAAAAACCAAGGTAATTACATCTATGATGCTCTG
CATACTCTCAGAGTCTTAGTACTGGGTACTTTATTTTGGTAATCCTATCT
TGTAATAGCATAGTATATCATAACAAAATCACTTTTGAAAATGCTCTGCT
TGTTCCTTGATCACTGCAGACAGTGAAGAAGAACCGGGATCCAAGATGGG
ACGAGGAGTTCCAATTCATGCTGGAGGAGCCACCTACTAACGACAGGATT
CATGTTGAAGTTGTTAGTACTTCAAGCAGGATGAGTCTATATCCTAAGGT
ACAGATAACAACATCTGTTTATACGTAACAAACTCCATTATGATCTCCAT
AAAAATAAGTCAGAATAAAATGCAAATATTATATTTTATGGTGGACTTTA
GAGAACTTGAGTTAGTGGAACACCTTGAATTCGAGTGGCCATTTTATAAT
TGCAGATGTTTTATTTAAACTGTTTGTAGCAATGCTTATGATCTGAATCA
ACTCATATATTCAACATATTTTACTATAGGAAACACTGGGTTACGTAGAC
ATATACCTGTCAGACGTGATAAAGAACAAGAGGATAAACGAGAGGTACCA
CCTCATTGATTCAAAAAATGGTATGATTCAGATCGAGATGCAATGGAGGA
CTTCATCCTGA

Sequence Length

2211

Sequence MD5 Checksum

2b858022eb17042241cf0f72b09f3c6b

Relationship

The mRNA DCAR_009493 is a part of Gene DCAR_009493
The Genetic Marker MK002335 K0008 is located in Gene DCAR_009493

Database Reference Annotations

GFF_source:.

Publication

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Analysis

Is Analysis

False

Is Obsolete

False