DCAR_005120 | CarrotOmics Tripal4

Cds

>DCAR_005120cds ATGAGCATTGAGCAACATGGGGATTTGCTAAATATGGAGTTTTGGGAGGG TTTGCCGGAGGAGATGAGGAAGTTGGCGGTGGAGCTTCATCAGACGAAAT GTAGGTTGAATGAGACGATTATTGTGTGTCATAGTGAGCCAGGTGCTTGG TATCCTCCGTTGTTCGAGACTTTACCGTGTCCGGAAATAGGGTATGGGAA ATATAGGATTGTGATTGGACGGACTATGTTTGAGACTGATAGGGTAAATG CTCACCATGTGGAGAGGTGTAATCGGATGGATTATGTTTGGGTTCCTACT GATTTTCATGTAACTACGTTTGTACAAAGTGGGGTTGATCCGTCCAAGGT TGTGAAAATTGTTCAACCAGTTGATTGGAAGTTCTTTGATCCGGTCAAGT ATAAGCCGTTTAACCTTCCCTCCAAAGGTACTCTGGTCTTAGGGTCAAGG CCAGCGAAGAAGTCGGACAATCATTTTGTGTTCTTGAGTGTTTTCAAGTG GGAGTATAGGAAGGGTTGGGATGTTTTGTTGCGGTCATACTTAAAGGAAT TTTCTGAAGCTGACGGGGTTTCCCTTTATTTGCTAACGAATCCCTACTAC ACTGAAAGTGATTTTGGTAATAAAATTTTGGAGTTCGTTGCGGGCTCTGA TTTGAAAAGACCGGCTCATGGGTGGGCTCCAGTTTATGTAATTGATAGCC ACATAGCTCAAATCGATTTTCCCAGAATATATAAAGCTGCTGATGCATTT GTTTTACCATCCAGAGGGGAAGGATGGGGCCGGCCAATTGTGGAAGCCAT GGCAATGTCTTTGCCAGTAATCATAACAAACTGGTCTGGACCAACAGAGT ACATGACAAAAGAGAATAGCTATCCATTGCCCGTAGAGAGAATGAGTGAT GTTATGGAAGGACCATTCCAAGGGCATCTTTGGGCCGAGCCTTCTGCTGA TAAATTACAGAATCTAATGAGACATGTGATGAGTAATCCTGAGGAAGCAA AGGCTAAAGGTCGTCAAGCTAGAGAGGATATGATTAACAGATACTCTCCA GAGATCGTTGCAGGCATTGTGAGAGACCATTTGCAACAAATTTTTGAAAA GACGTTATGA

Locus_tag

DCAR_005120

Name

DCAR_005120

Organism

Daucus carota subsp. sativus

Pep

>DCAR_005120pep MSIEQHGDLLNMEFWEGLPEEMRKLAVELHQTKCRLNETIIVCHSEPGAW YPPLFETLPCPEIGYGKYRIVIGRTMFETDRVNAHHVERCNRMDYVWVPT DFHVTTFVQSGVDPSKVVKIVQPVDWKFFDPVKYKPFNLPSKGTLVLGSR PAKKSDNHFVFLSVFKWEYRKGWDVLLRSYLKEFSEADGVSLYLLTNPYY TESDFGNKILEFVAGSDLKRPAHGWAPVYVIDSHIAQIDFPRIYKAADAF VLPSRGEGWGRPIVEAMAMSLPVIITNWSGPTEYMTKENSYPLPVERMSD VMEGPFQGHLWAEPSADKLQNLMRHVMSNPEEAKAKGRQAREDMINRYSP EIVAGIVRDHLQQIFEKTL*

Sequence Coordinates

DCARv2_Chr2:5066001..5067111+

Type

gene

Unique Name

DCAR_005120.gene

Sequence Residues

ATGAGCATTGAGCAACATGGGGATTTGCTAAATATGGAGTTTTGGGAGGG
TTTGCCGGAGGAGATGAGGAAGTTGGCGGTGGAGCTTCATCAGACGAAAT
GTAGGTTGAATGAGACGATTATTGTGTGTCATAGTGAGCCAGGTGCTTGG
TATCCTCCGTTGTTCGAGACTTTACCGTGTCCGGAAATAGGGTATGGGAA
ATATAGGATTGTGATTGGACGGACTATGTTTGAGACTGATAGGGTAAATG
CTCACCATGTGGAGAGGTGTAATCGGATGGATTATGTTTGGGTTCCTACT
GATTTTCATGTAACTACGTTTGTACAAAGTGGGGTTGATCCGTCCAAGGT
TGTGAAAATTGTTCAACCAGTTGATTGGAAGTTCTTTGATCCGGTCAAGT
ATAAGCCGTTTAACCTTCCCTCCAAAGGTACTCTGGTCTTAGGGTCAAGG
CCAGCGAAGAAGTCGGACAATCATTTTGTGTTCTTGAGTGTTTTCAAGTG
GGAGTATAGGAAGGGTTGGGATGTTTTGTTGCGGTCATACTTAAAGGAAT
TTTCTGAAGCTGACGGGGTTTCCCTTTATTTGCTAACGAATCCCTACTAC
ACTGAAAGTGATTTTGGTAATAAAATTTTGGAGTTCGTTGCGGGCTCTGA
TTTGAAAAGACCGGCTCATGGGTGGGCTCCAGTTTATGTAATTGATAGCC
ACATAGCTCAAATCGATTTTCCCAGAATATATAAAGCTGCTGATGCATTT
GTTTTACCATCCAGAGGGGAAGGATGGGGCCGGCCAATTGTGGAAGCCAT
GGCAATGTCTTTGCCAGTAATCATAACAAACTGGTCTGGACCAACAGAGT
ACATGACAAAAGAGAATAGCTATCCATTGCCCGTAGAGAGAATGAGTGAT
GTTATGGAAGGACCATTCCAAGGGCATCTTTGGGCCGAGCCTTCTGCTGA
TAAATTACAGAATCTAATGAGACATGTGATGAGTAATCCTGAGGAAGCAA
AGGCTAAAGGTCGTCAAGCTAGAGAGGATATGATTAACAGATACTCTCCA
GAGATCGTTGCAGGCATTGTGAGAGACCATTTGCAACAAATTTTTGAAAA
GACGTTATGA

Sequence Length

1110

Sequence MD5 Checksum

665daa8ba973e8c652e27b99ac79a0fa

Relationship

The mRNA DCAR_005120 is a part of Gene DCAR_005120
The Genetic Marker MK004384 K1828 is located in Gene DCAR_005120

Database Reference Annotations

GFF_source:.

Publication

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Analysis

Is Analysis

False

Is Obsolete

False