DCAR_004896 | CarrotOmics Tripal4

Cds

>DCAR_004896cds ATGATAGCCGAAATGGAAGTAGCCAATGCGATAGAACTAGGGAGGTCCCT CCAAGTACCTTCCGTCCAAGAGATAGCCAAGGAAACATTGGCTCCAATAC CGTCCCGATACGTACGTTTCGATCAAAAATGTTTAGTCTCCGATTCAGAT TCACTGCAAGTCCCTGTAATTGATATGAACATGTTACTTGATTGTGAATT AATGAACTCTGAGCTGAGAAAATTGCACCAGGCGTGTAAAGAGTGGGGTT TCTTTCAGCTGATAAACCACGGAGTCTCCAATTCGTTACTGGAGAGGCTT AAGACGGAGATTGGTGGGTTTTTTAGGCTGCCTCTGGAAGAGAAGAAAAA GTTTGGTCAGCTAGACGGAGATATAGAAGGATATGGACAACTATTCGTAG TCTCGGAGGAGCAGAAGCTTGATTGGGCGGACATGCTCTACTTGGGCACT CGACCTGCGCATCTCAGGAAACCACACTTGCTGCCACAGTTCTCTCCTTC CTTCAGACTCTACAAGTGA

Locus_tag

DCAR_004896

Name

DCAR_004896

Organism

Daucus carota subsp. sativus

Pep

>DCAR_004896pep MIAEMEVANAIELGRSLQVPSVQEIAKETLAPIPSRYVRFDQKCLVSDSD SLQVPVIDMNMLLDCELMNSELRKLHQACKEWGFFQLINHGVSNSLLERL KTEIGGFFRLPLEEKKKFGQLDGDIEGYGQLFVVSEEQKLDWADMLYLGT RPAHLRKPHLLPQFSPSFRLYK*

Sequence Coordinates

DCARv2_Chr2:1293041..1294929-

Type

gene

Unique Name

DCAR_004896.gene

Sequence Residues

ATGATAGCCGAAATGGAAGTAGCCAATGCGATAGAACTAGGGAGGTCCCT
CCAAGTACCTTCCGTCCAAGAGATAGCCAAGGAAACATTGGCTCCAATAC
CGTCCCGATACGTACGTTTCGATCAAAAATGTTTAGTCTCCGATTCAGAT
TCACTGCAAGTCCCTGTAATTGATATGAACATGTTACTTGATTGTGAATT
AATGAACTCTGAGCTGAGAAAATTGCACCAGGCGTGTAAAGAGTGGGGTT
TCTTTCAGGTATTTGTTATTTTATTTAAAAATTGATTCATGATCCAACAT
TTTCTTACAATTTTTCGTGTTTTGGAAGCTGATAAACCACGGAGTCTCCA
ATTCGTTACTGGAGAGGCTTAAGACGGAGATTGGTGGGTTTTTTAGGCTG
CCTCTGGAAGAGAAGAAAAAGTTTGGTCAGCTAGACGGAGATATAGAAGG
ATATGGACAACTATTCGTAGTCTCGGAGGAGCAGAAGCTTGATTGGGCGG
ACATGCTCTACTTGGGCACTCGACCTGCGCATCTCAGGAAACCACACTTG
CTGCCACAGTTCTCTCCTTCCTTCAGGTTACAAAACTCATCTCGCTCAAC
ATATCTTATACTCCGTCCGAACCATTCAAATGTTTACATTTGGGTTGGGC
ACGAAGGTCAATAATATATATAAAATAGAGTGAAAAAGTAAGAGAAGTGA
GAATTGTAGTGGGAAATGTATAAAGCAAGTAGAGTGGAGAAAAATAGTGG
GGTTAGTTAATTTTTATATTAAAATTTTTTATTATATTTAGAAAGTTTTG
AAACGTAAAGAATTGGATGGGACATCCAGAAAAAGGAAGTGTAAAAAAAT
GATTGGCACAGATAGACTAGTATTTATGTAAGCTGAACTAGTACGACAAG
CTATATAGATGAATATGTATTTAAAGTGGAGAGTGGAATTGTAATTATGA
TGCAGAGATGCTGTACTGGCCTACTCCGAAGAGGTGCAGAGTTTGTCTAT
GAAAATTCTTAAGCTAATGGCAAAAGCTCTAGGAATATTGGATCCTGCTG
ACATGGAAGTGCTGTTTGAAGAAGGCTTGCAGGGAATGAGGATGAACTAT
TATCCTCCCTGCCCTCAGCCTGACCAGGTTGTCGGACTCACGCCTCATAG
TGATGCAGACGGCCTAACCATCCTTCTCCAGCTTAATGAAACCGATGGGC
TCCAGGTCAGGAAAGACGGCCTTTGGATCCCAGTTAAGCCGCTGCCTTCA
GCTTTCATAGTAAACATTGGAGACATCTTGGAGGTAATTGTCAATCATGT
TTTCTCATTGCTTCAGTACATGAATAACTTATGGGAAAATGTTTCATGCA
CAAAATTGGGTACAAAAACATTCTGAAAATGAGTATGTGTTAAATTTTGA
TTGGAATGACCCCCTTGTATATACATAAACCATACCCTCCTCAACTGCTA
TGTCATTTTGTATCCAATTTTGTGGATGTAGCACTACTCTAAGTTATTTG
GCCCAACTGCAGTATTCATATGATTTATATTGTAGGTTGTAACCAACGGA
ACTTACCCGAGCATTGAGCATAGAGGTGTTGTGGACTCAGTAAAGGAAAG
ACTGTCCATTGCCACATTCTTGCATCCTAAGATAGACGGTGAATTTGGTC
CAGCACCAAGTCTTCTGTCACCACAAAATCCTCCAAAGTTTAGAAGGGTT
GGTACTGCAGAATTCCTCAAGGGATATCTAGCTCAGAAGCTTTCTGGCAA
ATGTTATCTGGACACTTTAAGGATGTAATTAATCTAATGTACTAGGTTTC
AATAATCCTTTCAATAAAAGGCTACCTGCCGAAAGTTCTTAAACATCATT
TATGGTGTTGTAATTGATGTGTTAGACTCTACAAGTGA

Sequence Length

1888

Sequence MD5 Checksum

4a74bb97c54ea317c563e06816a3afd5

Relationship

The mRNA DCAR_004896 is a part of Gene DCAR_004896
The Genetic Marker MK003487 K0931 is located in Gene DCAR_004896
The Genetic Marker MK006405 K3849 is located in Gene DCAR_004896

Database Reference Annotations

GFF_source:.

Publication

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Analysis

Is Analysis

False

Is Obsolete

False