DCAR_004482 | CarrotOmics Tripal4

Cds

>DCAR_004482cds ATGGCTTCTATTCGTAGAACATTATCTCCAGTTACCCGTCCTGGAATGTT AATGAATGGAGAAGCCAATTTAGTTGCATCTCCTCTTTCCAGGTCTTCCT CCTCTAACCAGAACCACACACTGCCAAATAGTAGTTCATCGGGATATGGC TTTTACACAGTTCAATCGTTTATATCAGATTTTTTCTCGCATAAATCATC TCGACCCCTGGAAAAGACAAAACTGAAGGGCCATGTTTGGAGAAGGGCTA TATTTCAATTCTTGGTGTGTTTTTTTCTTGGAATTTTTGTTGGGCTCACC CCATTTGTCTCCTTGGATATGTCCCCCAGTTACACACCTGAAGGGCCAGA GTTTCCTTTGAAGAAATTCTCACCTTTCATGGCGAATGAGAAAATGGTAG TAGATGAACTGCCTACAAAAAGTGAAAATGTTTCATTGAAGTTGCATTTG ACTGTCGAGGACAACAGTAATGTAACTTCTGATGCAAGTATTGCGCCCCA ATCATTTGGTGAGGCCTTAAATAAGCTTCTGATAATTGTGACTCCAACAT ATGCTCGGCCATTTGAAGCATATTATTTGAATCGTTTGGCTCACACGTTG AAATCGATTCCACCTCCTGTATTGTGGATCGTTGTCGAGATGAATTCTCA ATCTGTGGAAACAGCTGACTTGTTGAGAAAAACTGGAGTTATGTACAGGC ATCTCGCCTGCATTAAGAACTTGACAGAGATAAAATATAGGAGCTTGCAC CAAAGAAACCTGGCATTATCCCACATTGAGATGCATAGGCTTGATGGAAT AGTTTTTTTTGCAGATGATACGAACATTTATACTACTGAACTTTTTGAAC AGATGAGGCTAATCAGGCGGCTTGGAACATGGGCAGTGGCAAAATTGGTG CCTGGTACAAGCCAAATTGCGTTGGAAGGTCCAGTATGCAATGGAGGTCA TGTTCTAGGATGGCACAGTAGAGATGGGAGAAGAAGATCACGTAGATTCC ATGTGGGAATGTCTGGGTTTGCATTCAACAGTACCATACTTTGGGATTCA AAGAGATGGCACCGGCCTAATCCTAAACCTATTAGGCAGCTTGATACAGT CAAAGAAGAGGTCCAAGTGAGTACATTTGTTGAACAAATTGTTGAAGATG AAAGCCAAATGGAGGGCCTACCTCAGAACTGCTCAAAGGTCATGGTGTGG CATCTTCAAATCAAATCCCCGTCTTTGTATTCATATCCTCCTCACTGGCT CTTGAAAAATAATCTAAATGTAGTTCATCCACTCAACTCACAATTCTGA

Locus_tag

DCAR_004482

Name

DCAR_004482

Organism

Daucus carota subsp. sativus

Pep

>DCAR_004482pep MASIRRTLSPVTRPGMLMNGEANLVASPLSRSSSSNQNHTLPNSSSSGYG FYTVQSFISDFFSHKSSRPLEKTKLKGHVWRRAIFQFLVCFFLGIFVGLT PFVSLDMSPSYTPEGPEFPLKKFSPFMANEKMVVDELPTKSENVSLKLHL TVEDNSNVTSDASIAPQSFGEALNKLLIIVTPTYARPFEAYYLNRLAHTL KSIPPPVLWIVVEMNSQSVETADLLRKTGVMYRHLACIKNLTEIKYRSLH QRNLALSHIEMHRLDGIVFFADDTNIYTTELFEQMRLIRRLGTWAVAKLV PGTSQIALEGPVCNGGHVLGWHSRDGRRRSRRFHVGMSGFAFNSTILWDS KRWHRPNPKPIRQLDTVKEEVQVSTFVEQIVEDESQMEGLPQNCSKVMVW HLQIKSPSLYSYPPHWLLKNNLNVVHPLNSQF*

Sequence Coordinates

DCARv2_Chr1:48426096..48428714-

Type

gene

Unique Name

DCAR_004482.gene

Sequence Residues

ATGGCTTCTATTCGTAGAACATTATCTCCAGTTACCCGTCCTGGAATGTT
AATGAATGGAGAAGCCAATTTAGTTGCATCTCCTCTTTCCAGGTCTTCCT
CCTCTAACCAGAACCACACACTGCCAAATAGTAGTTCATCGGGATATGGC
TTTTACACAGTTCAATCGTTTATATCAGATTTTTTCTCGCATAAATCATC
TCGACCCCTGGAAAAGACAAAACTGAAGGGCCATGTTTGGAGAAGGGCTA
TATTTCAATTCTTGGTGTGTTTTTTTCTTGGAATTTTTGTTGGGCTCACC
CCATTTGTCTCCTTGGATATGTCCCCCAGTTACACACCTGAAGGGCCAGA
GTTTCCTTTGAAGAAATTCTCACCTTTCATGGCGAATGAGAAAATGGTAG
TAGATGAACTGCCTACAAAAAGTGAAAATGTTTCATTGAAGTTGCATTTG
ACTGTCGAGGACAACAGTAATGTAACTTCTGATGCAAGTATTGCGCCCCA
ATCATTTGGTGAGGCCTTAAATAAGCTTCTGATAATTGTGACTCCAACAT
ATGCTCGGCCATTTGAAGCATATTATTTGAATCGTTTGGCTCACACGTTG
AAATCGATTCCACCTCCTGTATTGTGGATCGTTGTCGAGATGAATTCTCA
ATCTGTGGAAACAGCTGACTTGTTGAGAAAAACTGGAGTTATGTACAGGC
ATCTCGCCTGCATTAAGAACTTGACAGAGATAAAATATAGGAGCTTGCAC
CAAAGAAACCTGGCATTATCCCACATTGAGATGCATAGGCTTGATGGAAT
AGTTTTTTTTGCAGATGATACGAACATTTATACTACTGAACTTTTTGAAC
AGATGAGGCTAATCAGGTATCATAACTTCTATATAATTTAAGTAACTGCA
TTTCATCATCTTTGTCTAATTCAAAAGCTTGATTTCAAATATGCGGATGT
TCCAACTTCTCGCTCTCACTTCTATATGAATCAACAACCATTATGTCTGT
GTGTGTTTTTTTTTTTTTGCAAGTGTCTGTTTTTGTTGGTTTTAACTTTG
AACGTCTTTTCTATTTGGTTGATCTGCATGAAGTATATGGGTGTCATGTT
TGTTAGAACTAAATATGAAAAAGGATATGTCAGACTGTAAAAGTTAGTAA
AAAACAAGGCCTCTCACTGTTTGAAGATGTGAAGGGTGGTGATCATGTTC
AAAGTCAGAGGGGAAAACTTAAGTTGGATTAAGATTAGAATTCAATTCCA
ATGTTGGTGTCAGAAAGTGAAATCTAGAACATATAATGTACCTGATGACT
TTAATTTAGTCAAAACTCAAAAGATAGTGTTAGGACAAGTAGCACTTGCA
TTTTCTGTGCTCTTTAGTAGTCATCTTTGGCATTCTAACATTGGTAGGTA
GGGCAGAACAAAAACTCTTGTATGGATCTTACCCTTCTGTCCTCTGTTAT
CATCTTGCTTTATGTACTGATCATTATTTGACTGCCAAACTTTTGATGCC
TAGGCGGCTTGGAACATGGGCAGTGGCAAAATTGGTGCCTGGTACAAGCC
AAATTGCGTTGGAAGGTCCAGTATGCAATGGAGGTCATGTTCTAGGATGG
CACAGTAGAGATGGGAGAAGAAGATCACGTAGATTCCATGTGGGAATGTC
TGGGTTTGCATTCAACAGTACCATACTTTGGGATTCAAAGAGATGGCACC
GGCCTAATCCTAAACCTATTAGGCAGCTTGATACAGTCAAAGAAGAGGTC
CAAGTGAGTGTCTTGCTTCATTACTGTCTTGAAGGTTTTTCTTATTAAAT
CTTATTGTGTGTATGGATGTTATCGGCATTACATGCTATGTTTCTTTATT
ATCCTCTATATCGCGAATAATTTTTCGACACATACTAGTCTAGTTTTAGA
TACTTGTTCCAAAGCGTACACCAGTTTGTTTAGAAGTCAAGCTCCCACTA
CCAGATATATGCCCAATTCTGTGAATCCACCTCAAAGGGAGGATAACAAA
CAATAATTAAAAAGAATCCCAGCATCACAATAATAATAATTTTTGCACCT
AAATGTAATGGCAATATTGTTAAGTTGTTGGCTAGCAGGGACTTGAGGCC
AAAATTTGAGGCCTTATCCCTATCCACTAATCTATTAGCAATGTGTCGGT
TGTTGGCTAGAGAGGACTTGAACCCCGAACATCGAAGCTTTGTCCCTATC
TTATAATCTAATAGGGAGGACTAAGATTTTGAGCTGTAATGGCAGAGTAT
GGTCTAGTTGTTAGAGGCTTATCTAACAAAACTGATATATAGGGTTTACC
TAGTTTCTAGCGAGTTCACTGGAAATATCCAACTTTCTGGAACTGGTCTC
TGGATTGTGATATTGATATTCTTATCTAATTGTTATAGTCATACTGTGGA
TGACTGGAAGTAACCTTTAATATTACTCTTTGCAGGTGAGTACATTTGTT
GAACAAATTGTTGAAGATGAAAGCCAAATGGAGGGCCTACCTCAGAACTG
CTCAAAGGTCATGGTGTGGCATCTTCAAATCAAATCCCCGTCTTTGTATT
CATATCCTCCTCACTGGCTCTTGAAAAATAATCTAAATGTAGTTCATCCA
CTCAACTCACAATTCTGA

Sequence Length

2618

Sequence MD5 Checksum

890461e1245e55f07327a503042d23be

Relationship

The mRNA DCAR_004482 is a part of Gene DCAR_004482
The Genetic Marker MK004505 K1949 is located in Gene DCAR_004482

Database Reference Annotations

GFF_source:.

Publication

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Analysis

Is Analysis

False

Is Obsolete

False